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Vesicle dynamics induced by chemical stimuli

Research Project

Project/Area Number 25800233
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Biological physics/Chemical physics/Soft matter physics
Research InstitutionTohoku University

Principal Investigator

Sakuma Yuka  東北大学, 理学研究科, 助教 (40630801)

Project Period (FY) 2013-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2015: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2014: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2013: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywordsベシクル / 化学刺激 / 膜変形 / 分子形状 / 国際情報交換 / フランス
Outline of Final Research Achievements

To understand the response of molecular assemblies against chemical stimuli is essential for approaching cell dynamics, such as cell deformation and division, from soft matter physics point of view. In this study, I focused on the vesicle dynamics relevant to cell functions induced by chemical stimuli, especially pore formation that plays an important role in membrane traffic. I succeed to reproduce pore formation on the vesicle by injecting hydroxide ions to phospholipid vesicles containing anionic lipids. The interaction between anionic lipid and hydroxide ion decreases cross section area of lipids, which produces the surface tension and then pore formation. This chemical control of pore formation is a first step to reveal biological function non-equilibrium soft matter physics point of view.

Report

(5 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (33 results)

All 2017 2016 2015 2014 2013 Other

All Journal Article (4 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 4 results,  Acknowledgement Compliant: 1 results) Presentation (22 results) (of which Int'l Joint Research: 5 results,  Invited: 4 results) Book (2 results) Remarks (5 results)

  • [Journal Article] Migration of phospholipid vesicles in response to OH2016

    • Author(s)
      Atsuji Kodama, Yuka Sakuma, Masayuki Imai, Yutaka Oya, Toshihiro Kawakatsu, Nicolas Puff and Miglena I. Angelova
    • Journal Title

      Soft Matter

      Volume: 12 Issue: 11 Pages: 2877-2886

    • DOI

      10.1039/c5sm02220g

    • Related Report
      2016 Annual Research Report 2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Role of Inverse-Cone-Shape Lipids in Temperature-Controlled Self-Reproduction of Binary Vesicles2016

    • Author(s)
      T. Jimbo, Y. Sakuma, N. Urakami, P. Ziherl, and M. Imai
    • Journal Title

      Biophys. J.

      Volume: 110 Issue: 7 Pages: 1551-1562

    • DOI

      10.1016/j.bpj.2016.02.028

    • Related Report
      2016 Annual Research Report 2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Dynamics of fatty acid vesicles in response to pH stimuli2015

    • Author(s)
      Keita Ikari, Yuka Sakuma, Takehiro Jimbo, Atsuji Kodama, Masayuki Imai, Pierre-Alain Monnard and Steen Rasmussen
    • Journal Title

      Soft Matter

      Volume: 11 Issue: 31 Pages: 6327-6334

    • DOI

      10.1039/c5sm01248a

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Tubular membrane formation of binary giant unilamellar vesicles composed of cylinder and inverse-cone shaped lipids2013

    • Author(s)
      Y. Sakuma, T. Taniguchi, T. Kawakatsu M. Imai
    • Journal Title

      The Biophysical Journal

      Volume: 105 Issue: 9 Pages: 2074-2081

    • DOI

      10.1016/j.bpj.2013.09.021

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Presentation] 脂質膜から探る生命の起源 -分子集合体はどのようにして生命へと進化したのか?-2017

    • Author(s)
      佐久間由香
    • Organizer
      第2回Keio Astrobiology Camp 2017
    • Place of Presentation
      山形県鶴岡市
    • Year and Date
      2017-03-26
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] 化学刺激による脂質ベシクル膜面上での孔開閉の制御2017

    • Author(s)
      佐久間由香,兒玉篤治,今井正幸
    • Organizer
      日本物理学会第72回年次大会
    • Place of Presentation
      大阪府豊中市
    • Year and Date
      2017-03-17
    • Related Report
      2016 Annual Research Report
  • [Presentation] 金属イオンにより駆動されるリン脂質ベシクルの拡散泳動2017

    • Author(s)
      兒玉篤治,佐久間由香,今井正幸,川勝年洋,Nicolas Puff,Miglena I. Angelova
    • Organizer
      日本物理学会第72回年次大会
    • Place of Presentation
      大阪府豊中市
    • Year and Date
      2017-03-17
    • Related Report
      2016 Annual Research Report
  • [Presentation] 自己生産するベシクルの機構2017

    • Author(s)
      神保岳大,佐久間由香,今井正幸,浦上直人,Primoz Ziherl,菅原正
    • Organizer
      日本物理学会第72回年次大会
    • Place of Presentation
      大阪府豊中市
    • Year and Date
      2017-03-17
    • Related Report
      2016 Annual Research Report
  • [Presentation] 膜状での鋳型高分子合成が誘起するベシクルダイナミクス2017

    • Author(s)
      青木春隆,今井正幸,佐久間由香,Peter Walde
    • Organizer
      日本物理学会第72回年次大会
    • Place of Presentation
      大阪府豊中市
    • Year and Date
      2017-03-17
    • Related Report
      2016 Annual Research Report
  • [Presentation] MECHANISM OF SELF-REPRODUCING VESICLES2017

    • Author(s)
      Takehiro Jimbo, Yuka Sakuma, Masayuki Imai, Naohito Urakami, Primoz Ziherl
    • Organizer
      Biophysical Society 61st Annual Meeting
    • Place of Presentation
      New Orleans, U.S.A.
    • Year and Date
      2017-02-11
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 金属イオンにより駆動されるリン脂質ベシクルの拡散泳動2016

    • Author(s)
      兒玉篤治、佐久間由香、今井正幸、川勝年洋、Nicolas Puff、Miglena I. Angelova
    • Organizer
      第6回ソフトマター研究会
    • Place of Presentation
      北海道札幌市
    • Year and Date
      2016-10-25
    • Related Report
      2016 Annual Research Report
  • [Presentation] Pore Formation in Vesicle Membranes Induced by Chemical Stimuli2016

    • Author(s)
      Y. Sakuma, A. Kodama and M. Imai
    • Organizer
      新学術領域「ゆらぎと構造の協奏」第3回領域研究会
    • Place of Presentation
      福岡県福岡市
    • Year and Date
      2016-06-17
    • Related Report
      2016 Annual Research Report
  • [Presentation] Morphology of Multi-Cellular Model2016

    • Author(s)
      R. Ebihara, T. Kono, Y. Sakuma, M. Imai and P.Ziherl
    • Organizer
      新学術領域「ゆらぎと構造の協奏」第3回領域研究会
    • Place of Presentation
      福岡県福岡市
    • Year and Date
      2016-06-17
    • Related Report
      2016 Annual Research Report
  • [Presentation] 化学刺激によるベシクル膜面上での孔形成2016

    • Author(s)
      佐久間由香,兒玉篤治,今井正幸
    • Organizer
      日本物理学会第71回年次大会
    • Place of Presentation
      東北学院大学(宮城,仙台)
    • Year and Date
      2016-03-19
    • Related Report
      2015 Research-status Report
  • [Presentation] 接着したベシクルの形態形成2016

    • Author(s)
      河野拓馬,海老原隆太,佐久間由香,今井正幸,Primoz Ziherl
    • Organizer
      日本物理学会第71回年次大会
    • Place of Presentation
      東北学院大学(宮城,仙台)
    • Year and Date
      2016-03-19
    • Related Report
      2015 Research-status Report
  • [Presentation] 二価の陽イオンによるリン脂質ベシクルの駆動2015

    • Author(s)
      兒玉篤治,佐久間由香,今井正幸,川勝年洋,Nicolas Puff, Miglena I. Angelova
    • Organizer
      第5回ソフトマター研究会
    • Place of Presentation
      東北大学(宮城,仙台)
    • Year and Date
      2015-12-17
    • Related Report
      2015 Research-status Report
  • [Presentation] 自己生産ベシクルにおけるPE脂質の役割について2015

    • Author(s)
      神保岳大,佐久間由香,今井正幸,浦上直人,Primoz Ziherl
    • Organizer
      第5回ソフトマター研究会
    • Place of Presentation
      東北大学(宮城,仙台)
    • Year and Date
      2015-12-17
    • Related Report
      2015 Research-status Report
  • [Presentation] 多細胞モデルの形態形成2015

    • Author(s)
      河野拓馬,海老原隆太,佐久間由香,今井正幸,Primoz Ziherl
    • Organizer
      第5回ソフトマター研究会
    • Place of Presentation
      東北大学(宮城,仙台)
    • Year and Date
      2015-12-17
    • Related Report
      2015 Research-status Report
  • [Presentation] 化学刺激によるリン脂質ベシクルの駆動2015

    • Author(s)
      兒玉篤治,佐久間由香,今井正幸,大矢豊大,川勝年洋,Nicolas Puff, Miglena I. Angelova
    • Organizer
      日本物理学会第2015年秋季大会
    • Place of Presentation
      関西大学(大阪,吹田)
    • Year and Date
      2015-09-18
    • Related Report
      2015 Research-status Report
  • [Presentation] 二成分脂質ベシクルで探る生命と分子集合体の境界2015

    • Author(s)
      佐久間由香
    • Organizer
      第53回日本生物物理学会年会
    • Place of Presentation
      金沢大学(石川,金沢)
    • Year and Date
      2015-09-14
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] Approach to Minimal Cell based on Membrane Physics2015

    • Author(s)
      Yuka Sakuma
    • Organizer
      International Workshop on Challenge to Synthesizing Life
    • Place of Presentation
      Kagetsuen (Hakone, Japan)
    • Year and Date
      2015-08-25
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Physics of Self-reproduction of Vesicle Reveal by 3D Analysis2015

    • Author(s)
      Takehiro Jimbo, Yuka Sakuma, Primoz Ziherl, Masayuki Imai
    • Organizer
      International Workshop on Challenge to Synthesizing Life
    • Place of Presentation
      Kagetsuen (Hakone, Japan)
    • Year and Date
      2015-08-25
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Migration of Phospholipid Vesicles in Response to Chemical Stimuli2015

    • Author(s)
      Atsuji Kodama, Yuka Sakuma, Masayuki Imai, Yutaka Oya, Toshihiro Kawakatsu, Nicolas Puff and Miglena Angelova
    • Organizer
      International Symposium on Fluctuation and Structure out of Equilibrium 2015
    • Place of Presentation
      Shiran-kaikan (Kyoto, Japan)
    • Year and Date
      2015-08-20
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] A Key for self-reproduction of vesicles2015

    • Author(s)
      Takehiro Jimbo, Yuka Sakuma, Primoz Ziherl and Masayuki Imai
    • Organizer
      International Symposium on Fluctuation and Structure out of Equilibrium 2015
    • Place of Presentation
      Shiran-kaikan (Kyoto, Japan)
    • Year and Date
      2015-08-20
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Binary Vesicles Having Functions of Protocell2013

    • Author(s)
      Y. Sakuma, T. Jimbo and M. Imai
    • Organizer
      International Workshop “From Soft Matter to Protocell”
    • Place of Presentation
      仙台
    • Related Report
      2013 Research-status Report
    • Invited
  • [Presentation] 自発曲率と相分離の結合によるチューブ構造形成

    • Author(s)
      佐久間由香,谷口貴志,川勝年洋,今井正幸
    • Organizer
      日本物理学会第68回年次大会
    • Place of Presentation
      徳島
    • Related Report
      2013 Research-status Report
  • [Book] Encyclopedia of Polymeric Nanomaterials2015

    • Author(s)
      Yuka Sakuma and Masayuki Imai
    • Total Pages
      8
    • Publisher
      Springer-Verlag
    • Related Report
      2014 Research-status Report
  • [Book] 生体膜の分子機構ーリピッドワールドが先導する生命科学2014

    • Author(s)
      佐久間由香,今井正幸
    • Total Pages
      35
    • Publisher
      化学同人
    • Related Report
      2014 Research-status Report
  • [Remarks] 東北大学 ソフトマター・生物物理研究室 研究業績

    • URL

      http://www.bio.phys.tohoku.ac.jp/achieve_soft.html

    • Related Report
      2016 Annual Research Report
  • [Remarks] ソフトマター・生物物理研究室(所属研究室)

    • URL

      http://www.bio.phys.tohoku.ac.jp/achieve_soft.html

    • Related Report
      2015 Research-status Report
  • [Remarks] 東北大学研究者紹介

    • URL

      http://db.tohoku.ac.jp/whois/detail/7eb1319e82f89a1e3f5070fb5ee1a2eb.html

    • Related Report
      2015 Research-status Report
  • [Remarks] 東北大学 ソフトマター・生物物理研究室

    • URL

      http://www.bio.phys.tohoku.ac.jp/protocell.html

    • Related Report
      2014 Research-status Report
  • [Remarks] 東北大学 ソフトマター・生物物理研究室

    • URL

      http://www.bio.phys.tohoku.ac.jp/achieve_soft.html

    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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