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Development of multicolor fluorescent probes for the detection of nucleic acids using GFP chromophores

Research Project

Project/Area Number 25810094
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Bio-related chemistry
Research InstitutionTokyo Institute of Technology

Principal Investigator

KANAMORI Takashi  東京工業大学, 生命理工学研究科, 助教 (90633446)

Project Period (FY) 2013-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2014: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Fiscal Year 2013: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords蛍光核酸 / 三重鎖DNA / RNA / 緑色蛍光タンパク質 / GFP / 三重鎖 / DNA / 有機合成 / 蛍光プローブ
Outline of Final Research Achievements

In this study, we tried to develop multicolor fluorescent nucleic acids probes for the simultaneous detection of a number of functional RNAs. In order to effectively develop multicolor fluorescent probes, we focused on GFP fluorophores. Since several GFP fluorophores derivatives are already known , so that we expected using these fluorophores makes development of multicolor fluorescent probes much easier. To develop fluorescent turn on probes, we used our previous fluorescent turn on system based on DNA triplex formation.
we achieved synthesis of several fluorescent nucleic acids probes that show fluorescence upon binding to target nucleic acids.

Report

(3 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • Research Products

    (4 results)

All 2014 2013

All Presentation (4 results)

  • [Presentation] SYNTHESIS AND PROPERTIES OF FLUORESCENT DEOXYURIDINES CONTAINING CHROMOPHORES DERIVED FROM GREEN FLUORESCENT PROTEIN2014

    • Author(s)
      Takashi Kanamori, Akihiro Takamura, Yoshiaki Masaki, Akihiro Ohkubo, Mitsuo Sekine, Koji Seio
    • Organizer
      Round Table on Nucleosides, Nucleotides and Nucleic Acids
    • Place of Presentation
      ポーランド, ポズナン
    • Year and Date
      2014-08-24 – 2014-08-28
    • Related Report
      2014 Annual Research Report
  • [Presentation] Fluorescence properties of GFP chromophores embedded in DNA triplexes2014

    • Author(s)
      Takashi Kanamori, Akihiro Takamura, Yoshiaki Masaki, Mitsuo Sekine, Kohji Seio
    • Organizer
      Fluorescent Biomolecules and their Building Blocks – Design and Applications (FB3)
    • Place of Presentation
      米国, カリフォルニア
    • Year and Date
      2014-08-06 – 2014-08-09
    • Related Report
      2014 Annual Research Report
  • [Presentation] GFPクロモフォアを導入したDNA三重鎖の蛍光増強を目指した構造探索2014

    • Author(s)
      金森功吏、高村亮宏、正木慶昭、大窪章寛、関根光雄、清尾康志
    • Organizer
      日本化学会第94春季年会
    • Place of Presentation
      名古屋大学
    • Related Report
      2013 Research-status Report
  • [Presentation] Fluorescent properties of DNA triplexes containing deoxyuridines modified with 4-(p-hydroxybenzylidene)-5-imidazolinone derivatives2013

    • Author(s)
      Takashi Kanamori, Akihiro Takamura, Yoshiaki Masaki, Akihiro Ohkubo, Mitsuo Sekine, Koji Seio
    • Organizer
      The 40th International Symposium on Nucleic Acids Chemistry 2013
    • Place of Presentation
      Kanagawa University
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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