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Genome-wide methylation study in intracranial germ cell tumors

Research Project

Project/Area Number 25830093
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Tumor biology
Research InstitutionNational Cancer Center Japan

Principal Investigator

SHINTARO Fukushima  独立行政法人国立がん研究センター, 研究所, リサーチレジデント (30529459)

Project Period (FY) 2013-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2014: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2013: ¥2,860,000 (Direct Cost: ¥2,200,000、Indirect Cost: ¥660,000)
Keywords頭蓋内胚細胞腫 / ジャーミノーマ / ゲノムワイドな低メチル化 / 始原生殖細胞由来 / メチル化 / 始原生殖細胞
Outline of Final Research Achievements

To elucidate the pathogenesis of intracranial germ cell tumors (iGCTs), we are going to execute a comprehensive genomic analysis by multi-institusional study. We used genomic DNA extracted from each frozen samples of 25 germinomas, 36 non-germinomatous GCTs (NGGCTs), and 6 normal tissues. A genome-wide methylation status was analyzed using HumanMethylation450 BeadChip (Illumina@). Germinomas were characterized by a global DNA hypomethylation in comparison to NGGCTs and normal tissues, which suggested germinomas originate from primordial germ cell showing a global hypomethylation during mammalian embryogenesis.

Report

(3 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • Research Products

    (8 results)

All 2015 2014 Other

All Presentation (6 results) Remarks (2 results)

  • [Presentation] Genome-wide methylation profiles in primary intracranial germ cell tumors suggest primordial germ cell origin of germinoma.2015

    • Author(s)
      Shintaro Fukushima
    • Organizer
      The 4th International CNS Germ Cell Tumour Symposium
    • Place of Presentation
      Tokyo
    • Year and Date
      2015-04-12 – 2015-04-15
    • Related Report
      2014 Annual Research Report
  • [Presentation] Genome-wide methylation profiles in primary intracranial germ cell tumors suggest primordial germ cell origin of germinoma.2014

    • Author(s)
      Shintaro Fukushima
    • Organizer
      1st Asian CNS GCT Conference
    • Place of Presentation
      Tokyo
    • Year and Date
      2014-12-20 – 2014-12-21
    • Related Report
      2014 Annual Research Report
  • [Presentation] 頭蓋内発生ジャーミノーマにおける全ゲノム的メチル化プロファイルは始原生殖細胞起源を示唆する2014

    • Author(s)
      福島慎太郎
    • Organizer
      第32回日本脳腫瘍学会学術集会
    • Place of Presentation
      千葉
    • Year and Date
      2014-11-30 – 2014-12-02
    • Related Report
      2014 Annual Research Report
  • [Presentation] 頭蓋内ジャーミノーマは全ゲノム的低メチル化状態により特徴づけられる2014

    • Author(s)
      福島慎太郎
    • Organizer
      第32回日本脳腫瘍病理学会
    • Place of Presentation
      徳島県徳島市藍場町2丁目14番地 あわぎんホール(徳島県郷土文化会館)
    • Related Report
      2013 Research-status Report
  • [Presentation] 頭蓋内発生ジャーミノーマにおける全ゲノム的メチル化プロファイルは始原生殖細胞起源を示唆する2014

    • Author(s)
      福島慎太郎
    • Organizer
      第8回日本エピジェネティクス研究会年会
    • Place of Presentation
      東京都文京区本郷7-3-1 伊藤国際学術研究センター
    • Related Report
      2013 Research-status Report
  • [Presentation] Primary intracranial germinomas are characterized by global DNA hypomethylation2014

    • Author(s)
      福島慎太郎
    • Organizer
      16th International Symposium on Pediatric Neuro-Oncology
    • Place of Presentation
      Shangri-La Hotel, 22 Orange Grove Road, 258350, Singapore
    • Related Report
      2013 Research-status Report
  • [Remarks] 国立がん研究センター研究所 新領域創成プロジェクトグループ 脳腫瘍連携研究分野 ホームページ

    • URL

      http://www.ncc.go.jp/jp/nccri/divisions/brain_tumor/index.html

    • Related Report
      2014 Annual Research Report
  • [Remarks] 国立がん研究センター研究所 新領域創成プロジェクトグループ 脳腫瘍連携研究分野 ホームページ

    • URL

      http://www.ncc.go.jp/jp/nccri/divisions/brain_tumor/brain_tumor01.html

    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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