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Global aggregation analysis of eukaryotic proteins.

Research Project

Project/Area Number 25840045
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Biophysics
Research InstitutionTokyo Institute of Technology

Principal Investigator

NIWA Tatsuya  東京工業大学, 生命理工学研究科, 助教 (50588530)

Research Collaborator TAGUCHI Hideki  東京工業大学, 大学院生命理工学研究科, 教授 (40272710)
Project Period (FY) 2013-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥4,420,000 (Direct Cost: ¥3,400,000、Indirect Cost: ¥1,020,000)
Fiscal Year 2014: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2013: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Keywordsフォールディング / タンパク質凝集 / 分子シャペロン / 無細胞タンパク質合成系 / 網羅解析 / タンパク質フォールディング
Outline of Final Research Achievements

To investigate the generality of the results of the comprehensive analysis of protein aggregation in prokaryotic proteins conducted by our groups, we conducted the comprehensive aggregation analysis in eukaryotic proteins in the same way and aimed to uncover the universal nature of the protein aggregation and folding across biological kingdoms.
We investigated the aggregation propensity for ~500 kinds of eukaryotic proteins and analyzed these data, resulting that from the point of view of physicochemical properties, eukaryotic proteins shared the similar tendencies in prokaryotic proteins. However, the specific regions called “intrinsically disordered region”, which are found in almost only eukaryotic proteins, showed the significant relationship with the aggregation propensity of proteins. This result may connect to the understanding of one end of the differences between prokaryotes and eukaryotes from the evolutionary point of view.

Report

(3 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • Research Products

    (2 results)

All 2014

All Presentation (2 results)

  • [Presentation] 再構築型無細胞タンパク質合成系を用いた出芽酵母タンパク質の凝集性の解析2014

    • Author(s)
      丹羽達也
    • Organizer
      第9回無細胞生命科学研究会
    • Place of Presentation
      大阪大学医学部 銀杏会館
    • Year and Date
      2014-10-08 – 2014-10-09
    • Related Report
      2014 Annual Research Report
  • [Presentation] 出芽酵母の凝集性タンパク質に対するシャペロンの可溶化効果2014

    • Author(s)
      上村英里、丹羽達也、上田卓也、田口英樹
    • Organizer
      第14回日本蛋白質科学会年会
    • Place of Presentation
      ワークピア横浜
    • Year and Date
      2014-06-25 – 2014-06-27
    • Related Report
      2014 Annual Research Report

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Published: 2014-07-25   Modified: 2019-07-29  

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