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Study on epigenetic regulation of Nodal gene

Research Project

Project/Area Number 25850219
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Integrative animal science
Research InstitutionWaseda University

Principal Investigator

Arai Daisuke  早稲田大学, 理工学術院, 講師 (20624951)

Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2015: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2014: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2013: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
KeywordsNodal / エピジェネティクス / ヒストン修飾 / 細胞分化 / がん / ノンコーディングRNA / DNAメチル化 / クロマチン / 胚性幹細胞
Outline of Final Research Achievements

Nodal gene plays essential roles in embryonic development. Meanwhile, expression of Nodal gene is strictly repressed in adults, and reactivation of Nodal gene is thought to contribute to malignant transformation. In this project, we investigated mechanisms for regulation of Nodal gene in terms of epigenetics. We found a region exhibiting dynamic changes in DNA methylation at upstream of transcriptional start site of mouse Nodal gene. This region, termed ERE, was a novel regulatory element that induced expression of Nodal in mouse embryonic stem cells. We confirmed that trimethylation of histone H3 lysine 27 (H3K27me3) at ERE was required for transcriptional repression of Nodal gene in differentiated cells. Furthermore, ERE is conserved in human genome, and H3K27me3 was decreased at ERE in human cancer cells.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (5 results)

All 2015 2014 2013

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Acknowledgement Compliant: 1 results) Presentation (4 results) (of which Int'l Joint Research: 2 results)

  • [Journal Article] An epigenetic regulatory element of the Nodal gene in the mouse and human genomes2015

    • Author(s)
      Daisuke Arai, Koji Hayakawa, Jun Ohgane, Mitsuko Hirosawa, Yoichi Nakao, Satoshi Tanaka, Kunio Shiota
    • Journal Title

      Mechanisms of Development

      Volume: 136 Pages: 143-154

    • DOI

      10.1016/j.mod.2014.12.003

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] Marine natural products that control a specific set of histone modifications2015

    • Author(s)
      Daisuke Arai, Chiaki Sakuma, Yoko Hayashi-Takanaka, Hiroshi Kimura, Yoichi Nakao
    • Organizer
      The 2015 International Chemical Congress of Pacific Basin Societies
    • Place of Presentation
      ハワイコンベンションセンター及びホノルル市内ホテル7会場
    • Year and Date
      2015-12-15
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Marine natural products that control a specific set of histone modifications2015

    • Author(s)
      Daisuke Arai, Chiaki Sakuma, Kind K. Kanto, Yoko Hayashi-Takanaka, Hiroshi Kimura, Yoichi Nakao
    • Organizer
      第40回内藤コンファレンス
    • Place of Presentation
      シャトレーゼ ガトーキングダム サッポロ
    • Year and Date
      2015-09-15
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Nodal遺伝子のエピジェネティック制御2014

    • Author(s)
      新井大祐、早川晃司、大鐘潤、中尾洋一、田中智、塩田邦郎
    • Organizer
      第8回日本エピジェネティクス研究会年会
    • Place of Presentation
      東京大学 伊藤国際学術研究センター
    • Year and Date
      2014-05-25 – 2014-05-27
    • Related Report
      2014 Research-status Report
  • [Presentation] エピジェネティック制御下にある新たなNodal遺伝子の制御領域2013

    • Author(s)
      新井大祐、大鐘潤、田中智、塩田邦郎
    • Organizer
      第7回日本エピジェネティクス研究会年会
    • Place of Presentation
      奈良県新公会堂
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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