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Isolation and characterization of Atg9-containing membrane structures

Research Project

Project/Area Number 25860149
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field General anatomy (including histology/embryology)
Research InstitutionJuntendo University

Principal Investigator

KAKUTA Soichiro  順天堂大学, 医学(系)研究科(研究院), 助教 (80551209)

Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2015: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2014: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2013: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Keywordsオートファジー / 小胞輸送 / 電子顕微鏡 / 形態解析 / 質量分析 / 膜構造 / 膜輸送 / プロテオーム / 培養細胞
Outline of Final Research Achievements

Atg9 is a membrane protein essential for autophagy and considered to be directly involved in the autophagosome formation. Mammalian Atg9A was reported to be localized to trans-Golgi network and endosomal compartment. For dissecting the Atg9A-containing membranes, we examined subcellular localization of Atg9A and performed immunoisolation of those membranes. Atg9A-GFP in human culture cells was observed as numerous puncta that move rapidly throughout the cytoplasm. We succeeded in isolation of these cytoplasmic membranes, and revealed that they were small vesicles by electron microscopy. Proteomic analyses revealed that isolated these vesicles contained proteins including Rab1, a small GTPase in ER-Golgi vesicle trafficking. In Rab1B-depleted cells, Atg9A accumulated on intermediate membrane structures at autophagosome formation site. These results indicated that Rab1B is involved in the regulation of proper development of autophagosome.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (14 results)

All 2016 2015 2014 Other

All Journal Article (2 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 2 results,  Open Access: 2 results) Presentation (8 results) Remarks (4 results)

  • [Journal Article] The thermotolerant yeast Kluyveromyces marxianus is a useful organism for structural and biochemical studies of autophagy.2015

    • Author(s)
      Yamamoto, H., Shima, T., Yamaguchi, M., Mochizuki, Y., Hoshida, H., Kakuta, S., Kondo-Kakuta, C., Noda, N. N., Inagaki, F., Itoh, T., Akada, R., Ohsumi, Y.
    • Journal Title

      The Journal of Biological Chemistry

      Volume: 290 Issue: 49 Pages: 29506-29518

    • DOI

      10.1074/jbc.m115.684233

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Yeast and mammalian autophagosomes exhibit distinct phosphatidylinositol 3-phosphate asymmetries2014

    • Author(s)
      Cheng J, Fujita A, Yamamoto H, Tatematsu T, Kakuta S, Obara K, Ohsumi Y, Fujimoto T.
    • Journal Title

      Nat. Commun.

      Volume: 5 Issue: 1 Pages: 3207-3207

    • DOI

      10.1038/ncomms4207

    • Related Report
      2015 Annual Research Report 2013 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] Atg9および関連タンパク質のオートファジーにおける機能の解析2016

    • Author(s)
      角田宗一郎、内山安男
    • Organizer
      第121回日本解剖学会全国学術集会
    • Place of Presentation
      福島県郡山市
    • Year and Date
      2016-03-30
    • Related Report
      2015 Annual Research Report
  • [Presentation] オートファゴソーム形成におけるAtg9と関連タンパク質の役割2015

    • Author(s)
      角田宗一郎、内山安男
    • Organizer
      第9回オートファジー研究会
    • Place of Presentation
      兵庫県淡路市
    • Year and Date
      2015-11-16
    • Related Report
      2015 Annual Research Report
  • [Presentation] Analysis of Atg9-containing membrane structures: ultrastructure and function in autophagy2015

    • Author(s)
      Soichiro Kakuta, Yasuo Uchiyama
    • Organizer
      第120回日本解剖学会全国学術集会
    • Place of Presentation
      神戸市国際会議場
    • Year and Date
      2015-03-21
    • Related Report
      2014 Research-status Report
  • [Presentation] オートファゴソーム形成におけるAtg9と関連タンパク質の役割2015

    • Author(s)
      角田宗一郎、内山安男
    • Organizer
      日本顕微鏡学会関東支部講演会
    • Place of Presentation
      新宿区工学院大学
    • Year and Date
      2015-02-28
    • Related Report
      2014 Research-status Report
  • [Presentation] Ultrastructural and biochemical analysis of Atg9-containing membrane structures2014

    • Author(s)
      Soichiro Kakuta, Hayashi Yamamoto, Yoshinori Ohsumi, Yasuo Uchiyama
    • Organizer
      日本顕微鏡学会第70回学術集会
    • Place of Presentation
      千葉市幕張メッセ国際会議場
    • Year and Date
      2014-05-11
    • Related Report
      2014 Research-status Report
  • [Presentation] Isolation and characterization of Atg9-containing membrane structures

    • Author(s)
      角田 宗一郎、山本 林、大隅 良典、内山 安男
    • Organizer
      第36回日本分子生物学会年会
    • Place of Presentation
      兵庫県神戸市
    • Related Report
      2013 Research-status Report
  • [Presentation] Atg9関連膜構造体の単離と解析

    • Author(s)
      角田 宗一郎、山本 林、大隅 良典、内山 安男
    • Organizer
      第7回オートファジー研究会
    • Place of Presentation
      静岡県掛川市
    • Related Report
      2013 Research-status Report
  • [Presentation] Atg9を含む膜構造の形態解析およびオートファジーにおける機能の解明

    • Author(s)
      角田 宗一郎、山本 林、大隅 良典、内山 安男
    • Organizer
      第119回日本解剖学会総会全国学術集会
    • Place of Presentation
      栃木県下野市自治医科大学
    • Related Report
      2013 Research-status Report
  • [Remarks] 順天堂大学研究者情報

    • URL

      https://www.juntendo.ac.jp/graduate/kenkyudb/search/researcher.php?MID=4852

    • Related Report
      2015 Annual Research Report
  • [Remarks] 順天堂大学研究者情報 研究業績詳細

    • URL

      https://www.juntendo.ac.jp/graduate/kenkyudb/search/achievement.php?MID=4852

    • Related Report
      2015 Annual Research Report
  • [Remarks] 学校法人順天堂研究者情報データベース

    • URL

      https://www.juntendo.ac.jp/graduate/kenkyudb/search/researcher.php?MID=4852

    • Related Report
      2014 Research-status Report
  • [Remarks] 学校法人順天堂研究者情報データベース

    • URL

      https://www.juntendo.ac.jp/graduate/kenkyudb/search/achievement.php?MID=4852

    • Related Report
      2013 Research-status Report

URL: 

Published: 2014-07-25   Modified: 2019-07-29  

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