• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Functional and structural analysis of DNA gyrase from Beijing strain M. tuberculosis

Research Project

Project/Area Number 25860329
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Bacteriology (including mycology)
Research InstitutionNational Institute of Infectious Diseases

Principal Investigator

Kim Hyun  国立感染症研究所, その他部局等, 主任研究官 (90648817)

Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2015: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2014: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2013: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Keywords結核菌 / 薬剤耐性菌 / X線回析 / 立体構造解析 / DNAジャイレース / ニューキノロン / X線回折
Outline of Final Research Achievements

Emergence of multidrug-resistant (MDR) tuberculosis is becoming an increasing public health problem and poses a serious threat to TB control. Therefore, novel anti-TB drugs are needed urgently. The outbreak of MDR-TB leads fluoroquinolones to becoming an important second-line anti-TB agent. The major target of FQs is DNA gyrase consisted of two subunits GyrA and GyrB. FQs-gyrase interaction site is thought to be located at QRDRs in GyrA and GyrB where the majority of mutations conferring resistance to FQs exist. Recently, FQs-resistant M. tuberculosis is dramatically increased. However, the mechanisms of correlation between MtDNA gyrase and FQs-resistance are still not clearly understood. In this study, we examined and investigated an association between FQs and mutants GyrA subunits from Beijing strain by using inhibition assays. Furthermore, we demonstrated the different structures of MtDNA gyrases, between H37Rv and Beijing strain DNA GyrA (N-term) from structural analysis.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (16 results)

All 2016 2015 2014 2013

All Journal Article (7 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 7 results,  Open Access: 7 results,  Acknowledgement Compliant: 1 results) Presentation (9 results)

  • [Journal Article] Impact of mutations in DNA gyrase genes on quinolone resistance in Campylobacter jejuni2016

    • Author(s)
      Ruchirada Changkwanyeun, Tomoyuki Yamaguchi, Siriporn Kongsoi, Kanjana Changkaew, Kazumasa Yokoyama, Hyun Kim, Orasa Suthienkul, Masaru Usui, Yutaka Tamura, Chie Nakajima and Yasuhiko Suzuki
    • Journal Title

      Drug testing and analysis

      Volume: in press Issue: 10 Pages: 1071-1076

    • DOI

      10.1002/dta.1937

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Characterization of Campylobacter jejuni DNA gyrase as the target of quinolones2015

    • Author(s)
      Ruchirada Changkwanyeun, Masaru Usui, Siriporn Kongsoi, Kazumasa Yokoyama, Hyun Kim, Orasa Suthienkul, Kanjana Changkaew, Chie Nakajima, Yutaka Tamura, Yasuhiko Suzuki
    • Journal Title

      Journal of infection and chemotherpy

      Volume: 21;8 Issue: 8 Pages: 604-609

    • DOI

      10.1016/j.jiac.2015.05.003

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Purification and functional characterization of diadenosine 5', 5'''-P1,P4-tetraphosphate phosphorylases from Mycobacterium smegmatis and Mycobacterium avium.2015

    • Author(s)
      Naoko Honda, Hyun Kim, Emiko Rimbara, Atsushi Kato, Keigo Shibayama, Shigetarou Mori
    • Journal Title

      Protein Expression and Purification

      Volume: 112 Pages: 37-42

    • DOI

      10.1016/j.pep.2015.04.010

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Biochemical characterization of quinolinic acid phosphoribosyltransferase from Mycobacterium tuberculosis H37Rv and inhibition of its activity by pyrazinamide2014

    • Author(s)
      Kim H, Shibayama K, Rimbara E, Mori S
    • Journal Title

      PLoS One

      Volume: 9 Issue: 6 Pages: 1-11

    • DOI

      10.1371/journal.pone.0100062

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Roles of Ala-149 in the catalytic activity of diadenosine tetraphosphate phosphorylase from Mycobacterium tuberculosis H37Rv2014

    • Author(s)
      Mori S, Kim H, Rimbara E, Arakawa Y, Shibayama K
    • Journal Title

      Biosci Biotechnol Biochem

      Volume: 79 Issue: 2 Pages: 236-238

    • DOI

      10.1080/09168451.2014.973364

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Functional analysis of the receptor binding domain of SARS coronavirus S1 region and its monoclonal antibody2014

    • Author(s)
      Hyun Kim, Yeongjin Hong, Keigo Shibayama, Yasuhiko Suzuki, Nobutaka Wakamiya, Youn Uck Kim
    • Journal Title

      Genes & Genomics

      Volume: 36;3 Issue: 3 Pages: 387-397

    • DOI

      10.1007/s13258-014-0186-9

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] What Hansen's disease research learned from tuberculosis research: from molecular biological aspect2014

    • Author(s)
      Yasuhiko Suzuki, Tomoyuki Yamaguchi, Hyun Kim, Kazumasa Yokoyama, Chie, Nakayama
    • Journal Title

      Nihon Hansenbyo Gakkai Zasshi

      Volume: 83;3 Pages: 21-27

    • NAID

      130005169024

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] katG遺伝子上で新たに見出された変異とイソニアジド耐性化との関連2016

    • Author(s)
      金玄、森茂太郎、林原絵美子、柴山恵吾
    • Organizer
      第89回日本ハンセン病学会・総会
    • Place of Presentation
      群馬県
    • Year and Date
      2016-06-07
    • Related Report
      2015 Annual Research Report
  • [Presentation] Identification of katG gene mutations associated with isoniazid-resistant Mycobacterium tuberculosis2016

    • Author(s)
      Hyun Kim, Shigetarou Mori, Ruwen Jou, Emiko Rimbara, Keigo Shibayama
    • Organizer
      第89回日本細菌学会
    • Place of Presentation
      大阪
    • Year and Date
      2016-03-23
    • Related Report
      2015 Annual Research Report
  • [Presentation] Novel inhibitors of diadenosine tetraphosphate phosphorylase and their antituberculosis activity2016

    • Author(s)
      Shigetarou Mori, Naoko Honda, Hyun Kim, Emiko Rimbara, and Keigo Shibayama
    • Organizer
      第89回日本細菌学会
    • Place of Presentation
      大阪市
    • Year and Date
      2016-03-23
    • Related Report
      2015 Annual Research Report
  • [Presentation] Characterization of QAPRTase From M. tuberculosis H37Rv And Inhibition of Its Activity by Pyrazinamide2014

    • Author(s)
      金 玄, 森茂太郎, 林原絵美子,柴山恵吾
    • Organizer
      第87回ハンセン病学会・総会
    • Place of Presentation
      所沢市
    • Year and Date
      2014-09-29 – 2014-09-30
    • Related Report
      2014 Research-status Report
  • [Presentation] nzymatic Activity of Quinolinic Acid Phosphoribosyltransferase From Mycobacterium tuberculosis H37Rv And Inhibition of Its Activity by Pyrazinamide2014

    • Author(s)
      Hyun Kim, Shigetarou Mori, Emiko Rimbara, and Keigo Shibayama
    • Organizer
      International Union of Microbiological Societies Congresses (IUMS)
    • Place of Presentation
      カナダ・モントリオール
    • Year and Date
      2014-07-27 – 2014-08-01
    • Related Report
      2014 Research-status Report
  • [Presentation] Clarification of Correlation Between Mutants DNA GyrA and Quinolone Resistance in M. tuberculosis2014

    • Author(s)
      金 玄、横山和正、中島千絵、森茂太郎、柴山恵吾、鈴木定彦
    • Organizer
      第87回日本細菌学会総会
    • Place of Presentation
      東京都江戸川区(タワーホール船堀)
    • Related Report
      2013 Research-status Report
  • [Presentation] Clarification of Correlation Between Mutations on DNA Gyrase A subunit and Quinolone Resistance in Mycobacterium tuberculosis2013

    • Author(s)
      金 玄、横山和正、中島千絵、鈴木定彦
    • Organizer
      第86回日本ハンセン病学会
    • Place of Presentation
      大宮市(大宮ソニックシティ)
    • Related Report
      2013 Research-status Report
  • [Presentation] 結核菌DNAジャイレースにおけるキノロン耐性決定領域外に見出されたアミノ酸置換のキノロン剤耐性への影響2013

    • Author(s)
      金 玄、横山和正、中島千絵、鈴木定彦
    • Organizer
      第86回日本ハンセン病学会
    • Place of Presentation
      大宮市(大宮ソニックシティ)
    • Related Report
      2013 Research-status Report
  • [Presentation] Enzymatic activities of Quinolinic acid phosphoribosyltransferase from Mycobacterium tuberculosis H37Rv2013

    • Author(s)
      金 玄、森茂太郎、林原恵美子、柴山恵吾
    • Organizer
      Interscience Conference on Antimicrobial Agents and Chemotherapy (ICAAC)
    • Place of Presentation
      アメリカ・デンバー
    • Related Report
      2013 Research-status Report

URL: 

Published: 2014-07-25   Modified: 2019-07-29  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi