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Molecular mechanism of Cdkal1 single nucleotide polymorphism-dependent type 2 diabetes

Research Project

Project/Area Number 25860753
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Metabolomics
Research InstitutionKumamoto University

Principal Investigator

WEI Fan-Yan  熊本大学, 生命科学研究部, 助教 (90555773)

Project Period (FY) 2013-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥4,160,000 (Direct Cost: ¥3,200,000、Indirect Cost: ¥960,000)
Fiscal Year 2014: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2013: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Keywords糖尿病 / tRNA / 修飾 / Cdkal1 / 一塩基多型
Outline of Final Research Achievements

SNPs in CDKAL1 is one of the most reliable risk factors for type 2 diabetes (T2D). However, the molecular mechanism by which the intronic single nucleotide polymorphisms (SNPs) contribute to T2D has been unclear. This study revealed the SNPs as actively involved in the regulation of cellular CDKAL1 levels through a unique post-transcriptional mechanism. A specific splicing variant of CDKAL1 (CDKAL1-v1) was drastically decreased in individuals carrying the risk SNPs in CDKAL1. CDKAL1-v1 is a non-coding transcript, which regulates Cdkal1 level by the competitive binding of a CDKAL1-targeting microRNA. By direct editing of genome in human cell lines, this study further shows that the nucleotides around the SNPs regions are critical for the alternative splicing of CDKAL1-v1. These findings demonstrate that the T2D-associated SNPs in CDKAL1 directly contribute to the decrease in CDKAL1-v1 by impairing splicing, which in turn induces microRNA-mediated suppression of cellular CDKAL1 level.

Report

(3 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • Research Products

    (12 results)

All 2015 2014 2013

All Journal Article (6 results) (of which Peer Reviewed: 6 results,  Open Access: 3 results,  Acknowledgement Compliant: 2 results) Presentation (6 results)

  • [Journal Article] Identification of a splicing variant that regulates type 2 diabetes risk factor CDKAL1 level by a coding-independent mechanism in human.2014

    • Author(s)
      Zhou B., Wei F.Y., Kanai N., Fujimura A., Kaitsuka T., Tomizawa K.
    • Journal Title

      Human Molecular Genetics

      Volume: 23 Issue: 17 Pages: 4639-4650

    • DOI

      10.1093/hmg/ddu184

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Efficient transduction of eleven poly-arginine peptide in an ischemic lesion of mouse brain.2014

    • Author(s)
      Gotanda Y., Wei F.Y., Harada H., Nakamura K.I., Ohta K., Tomizawa K., Ushijima K.
    • Journal Title

      Journal of Stroke and Cerebrovascular Diseases.

      Volume: 8 Issue: 8 Pages: 2023-2030

    • DOI

      10.1016/j.jstrokecerebrovasdis.2014.02.027

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] High Oxygen Condition Facilitates the Differentiation of Mouse and Human Pluripotent Stem Cells into Pancreatic Progenitors and Insulin-producing Cells.2014

    • Author(s)
      Farzana Hakim, Taku Kaitsuka, Jamiruddin Mohd. Raeed, Fan-Yan Wei, Nobuaki Shiraki, Tadayuki Akagi, Takashi Yokota, Shoen Kume, and Kazuhito Tomizawa
    • Journal Title

      The journal of biological chemistry

      Volume: 289 Issue: 14 Pages: 9623-9638

    • DOI

      10.1074/jbc.m113.524363

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Generation of Functional Insulin-Producing Cells From Mouse Embryonic Stem Cells Through 804G Cell-Derived Extracellular Matrix and Protein Transduction of Transcription Factors.2014

    • Author(s)
      Kaitsuka T, Noguchi H, Shiraki N, Kubo T, Wei FY, Hakim F, Kume S, Tomizawa K.
    • Journal Title

      Stem Cells Transl Med.

      Volume: 3 Issue: 1 Pages: 114-127

    • DOI

      10.5966/sctm.2013-0075

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Cyclin G2 promotes hypoxia-driven local invasion of glioblastoma by orchestrating cytoskeletal dynamics2013

    • Author(s)
      Fujimura A, Michiue H, Cheng Y, Uneda A, Tani Y, Nishiki T, Ichikawa T, Wei FY, Tomizawa K, Matsui H
    • Journal Title

      Neoplasia

      Volume: 15 Issue: 11 Pages: 1272-1281

    • DOI

      10.1593/neo.131440

    • Related Report
      2013 Research-status Report
    • Peer Reviewed
  • [Journal Article] Quantitative PCR measurement of tRNA 2 methylthio modification for assessing type 2 diabetes risk.2013

    • Author(s)
      Kie, Pei-Yu, et al.
    • Journal Title

      Clinical Chemistry

      Volume: 59 Issue: 11 Pages: 1604-1612

    • DOI

      10.1373/clinchem.2013.210401

    • Related Report
      2013 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] マウスES細胞から分化したインスリン産生細胞での膵島特異的な転写因子の欠如とその補充による分化効率の改善2015

    • Author(s)
      本多 加奈、貝塚 拓、魏 范研、富澤 一仁
    • Organizer
      第92回日本生理学会大会
    • Place of Presentation
      兵庫県神戸市神戸国際展示場
    • Year and Date
      2015-03-22
    • Related Report
      2014 Annual Research Report
  • [Presentation] X染色体連鎖性精神遅滞の分子機構解明に関する研究2015

    • Author(s)
      永芳 友、魏 范研、貝塚 拓、鈴木 健夫、鈴木 勉、富澤 一仁
    • Organizer
      第92回日本生理学会大会
    • Place of Presentation
      兵庫県神戸市神戸国際展示場
    • Year and Date
      2015-03-21
    • Related Report
      2014 Annual Research Report
  • [Presentation] がんにおけるミトコンドリアタンパク合成関連遺伝子の解析2015

    • Author(s)
      山村 遼介、魏 范研、貝塚 拓、富澤 一仁
    • Organizer
      第92回日本生理学会大会
    • Place of Presentation
      兵庫県神戸市神戸国際展示場
    • Year and Date
      2015-03-21
    • Related Report
      2014 Annual Research Report
  • [Presentation] Cdkal1 欠損マウスにおける抗糖尿病治療薬効果の検討2014

    • Author(s)
      渡部 佐耶加、魏 范研、貝塚 拓、富澤 一仁
    • Organizer
      第91回日本生理学会大会
    • Place of Presentation
      鹿児島県鹿児島市郡元
    • Related Report
      2013 Research-status Report
  • [Presentation] チオメチル化修飾欠損によるタンパク質誤翻訳への効果的な化合物のスクリーニング系の開発2014

    • Author(s)
      田尻 崇晃、魏 范研、貝塚 拓、富澤 一仁
    • Organizer
      第91回日本生理学会大会
    • Place of Presentation
      鹿児島県鹿児島市郡元
    • Related Report
      2013 Research-status Report
  • [Presentation] X 染色体連鎖性精神遅滞の分子機構解明に関する研究2014

    • Author(s)
      永芳 友、魏 范研、貝塚 拓、富澤 一仁
    • Organizer
      第91回日本生理学会大会
    • Place of Presentation
      鹿児島県鹿児島市郡元
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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