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Genome-wide approaches for CAKUT to understand molecular mechanisms of human renal development

Research Project

Project/Area Number 25860862
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Pediatrics
Research InstitutionKobe University

Principal Investigator

SHONO Akemi  神戸大学, 医学(系)研究科(研究院), 技術補佐員 (10535066)

Project Period (FY) 2013-04-01 – 2015-03-31
Project Status Completed (Fiscal Year 2014)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2014: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Fiscal Year 2013: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywords腎尿路奇形 / CAKUT / 腎発生 / 腎系譜 / 網羅的遺伝子解析 / 次世代シークエンサー解析 / 腎再生 / 分化誘導 / 腎系譜分化誘導 / iPS細胞
Outline of Final Research Achievements

This study was approved by the ethics committee of Kobe University and the informed consents were obtained from all participants. Here we report three major results from 2013 to 2014 as shown in below.
1) Two hundred six cases including 115 cases from 105 families of syndromic CAKUT and 91 cases from 82 families of non-syndromic CAKUT, together with some indistinguishable cases from CAKUT, were collected and classified by the clinical phenotypes. 2) Responsible genes and genetic regions for 62 cases from 44 families were identified using the Sanger sequencing in combination with the next generation sequencing (NGS) and the DNA microarray. 3) Further NGS approach using a CAKUT-specific panel we originally developed was helpful to identify responsible/candidate genes which were unpredictable from the clinical phenotypes.

Report

(3 results)
  • 2014 Annual Research Report   Final Research Report ( PDF )
  • 2013 Research-status Report
  • Research Products

    (6 results)

All 2015 2014 Other

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Acknowledgement Compliant: 1 results) Presentation (3 results) Remarks (2 results)

  • [Journal Article] Differential diagnosis of Bartter syndrome, Gitelman syndrome, and pseudo-Bartter/Gitelman syndrome based on clinical characteristics.2015

    • Author(s)
      Matsunoshita N, Nozu K, Shono A, Nozu Y, Fu XJ, Morisada N, Kamiyoshi N, Ohtsubo H, Ninchoji T, Minamikawa S, Yamamura T, Nakanishi K, Yoshikawa N, Shima Y, Kaito H, Iijima K.
    • Journal Title

      Genetics in Medicine

      Volume: -

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] The comprehensive genetic analysis of congenital anomalies of kidney and urinary tract (CAKUT) in Japan2014

    • Author(s)
      Morisada N, Taniguchi-Ikeda M, Nozu K, Shono A, Kamei K, Ito S, Tanaka R, Iijima K
    • Organizer
      The American Society of Human Genetics Annual Meeting
    • Place of Presentation
      San Diego(USA)
    • Year and Date
      2014-10-18 – 2014-10-22
    • Related Report
      2014 Annual Research Report
  • [Presentation] 本邦におけるCAKUT包括的原因遺伝子解析システムの構築2014

    • Author(s)
      森貞直哉、庄野朱美、忍頂寺毅史、貝藤裕史、野津寛大、 亀井宏一、伊藤秀一、田中亮二郎、飯島一誠
    • Organizer
      第57回日本腎臓学会学術総会
    • Place of Presentation
      パシフィコ横浜(神奈川県)
    • Year and Date
      2014-07-04 – 2014-07-06
    • Related Report
      2014 Annual Research Report 2013 Research-status Report
  • [Presentation] 次世代シークエンサーによるヒトCAKUTの原因遺伝子解析2014

    • Author(s)
      森貞直哉、庄野朱美、忍頂寺毅史、貝藤裕史、池田真理子、野津寛大、亀井宏一、伊藤秀一、田中亮二郎、飯島一誠
    • Organizer
      第37回日本小児遺伝学会学術集会
    • Place of Presentation
      名古屋市立大学桜山キャンパス(愛知県)
    • Related Report
      2013 Research-status Report
  • [Remarks] 腎・泌尿器系の希少難治性疾患群に関する調査研究班

    • URL

      http://www.med.kobe-u.ac.jp/sgridk/

    • Related Report
      2014 Annual Research Report
  • [Remarks] 神戸大学大学院医学研究科 内科系講座小児科学分野 ホームページ

    • URL

      http://www.med.kobe-u.ac.jp/pediat/

    • Related Report
      2014 Annual Research Report

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Published: 2014-07-25   Modified: 2019-07-29  

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