Proteomic analyses of bone and soft tissue tumors
Project/Area Number |
25861342
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Research Category |
Grant-in-Aid for Young Scientists (B)
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Allocation Type | Multi-year Fund |
Research Field |
Orthopaedic surgery
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Research Institution | Juntendo University |
Principal Investigator |
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Project Period (FY) |
2013-04-01 – 2016-03-31
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Project Status |
Completed (Fiscal Year 2015)
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Budget Amount *help |
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2014: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2013: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
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Keywords | 骨軟部腫瘍 / タンパク質発現解析 / プロテオミクス / GIST / 滑膜肉腫 / Ewing肉腫 / 横紋筋肉腫 / KTCD12 |
Outline of Final Research Achievements |
We conducted proteomics analyses to generate the protein profiles regarding bone and soft-tissue tumors (BST) and discover novel biomarkers of BST. We performed validation and functional studies for identified proteins that were candidate biomarkers. In this project, we focused on GIST, Ewing sarcoma, synovial sarcoma, osteosarcoma as well as epithelioid sarcoma In the results, we identified several proteins which were candidates of biomarkers including prognosis and chemo-sensitivities. We also succeeded to validate the power of biomarker in the each larger cohort as validation studies. And we succeeded to elucidate functions regarding malignancies and chemo-resistances as functional studies. Furthermore, we conducted proteomics analyses to generate the protein profiles regarding histological specific fusion genes in BST.
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Report
(4 results)
Research Products
(52 results)
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[Journal Article] The Recognition of Locomotive Syndrome in 2014: A Cross-sectional Study in the Orthopeadic Outpatients in Tokyo.2015
Author(s)
Ishii M, Kim Y, Suehara Y, Kawasaki T, Matsuoka J, Akaike K, Mukaihara K, Kubota D, Okubo T, Saito T, Takagi T, Kaneko K.
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Journal Title
British Journal of Medicine & Medical Research
Volume: 6(6)
Issue: 6
Pages: 606-616
DOI
Related Report
Peer Reviewed / Open Access / Acknowledgement Compliant
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[Journal Article] Sarcomatous transformation of EGFR and TP53 mutation-positive metastatic adenocarcinoma of the lungs, masquerading as a primary pleomorphic sarcoma of the proximal femur2015
Author(s)
Toda-Ishii M, Akaike K, Kurisaki-Arakawa A, Arakawa A, Mukaihara K, Suehara Y, Takagi T, Kaneko K, Yao T, Saito T.
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Journal Title
International journal of clinical and experimental pathology.
Volume: 8
Pages: 3270-3278
Related Report
Peer Reviewed / Open Access
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[Journal Article] Rationale for co-targeting IGF-1R and ALK in ALK fusion positive lung cancer2014
Author(s)
4.Lovly CM, McDonald NT, Chen H, Jin H, Lim D, Suehara Y, Wang Lu, Chen X, Lu P, Red-Brewer M, Johnson DH, Horn L, Ladanyi M, Pao W
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Journal Title
Nature Medicine
Volume: 20(9)
Issue: 9
Pages: 1027-1034
DOI
Related Report
Peer Reviewed
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[Journal Article] Proteomic Profile of Epithelioid Sarcoma2014
Author(s)
Mukaihara K, Kubota D, Yoshida A, Asano N, Suehara Y, Kaneko K, Kawai A, Kondo T
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Journal Title
Journal of Proteomics & Bioinformatics
Volume: 7
Issue: 07
Pages: 158-165
DOI
Related Report
Peer Reviewed / Open Access / Acknowledgement Compliant
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[Journal Article] An Outpatient-based Survey about the Recognition of Locomotive Syndrome and the Results of the Loco-check at a University Hospital in Tokyo2014
Author(s)
Okubo T, Suehara Y, Kawasaki T, Akaike K, Toda M, Okubo N, Kubota D, Mukaihara K, Kim Y, Kaketa T, Homma Y, Shimanouchi N, Saito T, Takagi T and Kaneko K.
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Journal Title
British Journal of Medicine & Medical Research
Volume: 4(17)
Issue: 17
Pages: 3255-3268
DOI
Related Report
Peer Reviewed / Open Access / Acknowledgement Compliant
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[Journal Article] Quantitative assessment of intragenic receptor tyrosine kinase deletions in primary glioblastomas: their prevalence and molecular correlates2013
Author(s)
Kastenhuber ER, Huse JT, Berman SH, Pedraza A, Zhang J, Suehara Y, Viale A, Cavatore M, Heguy A, Szerlip N, Ladanyi M, Brennan CW
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Journal Title
Acta Neuropathologica
Volume: -
Issue: 5
Pages: 747-759
DOI
Related Report
Peer Reviewed
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[Journal Article] Proteomic technologies to develop biomarkers and functional analyses for bone and soft tissue tumors2013
Author(s)
Suehara Y, Kohsaka S, Kubota D, Mukaihara K, Akaike K, Mineki R, Fujimura T , Kaneko K, Ladanyi M, Saito T, Kondo T
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Journal Title
Journal of Proteomics & Bioinformatics
Volume: S3
Pages: 1-1
DOI
Related Report
Peer Reviewed
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[Journal Article] Response to Cabozantinib in Patients with RET Fusion-Positive Lung Adenocarcinomas2013
Author(s)
Drilon A, Wang L, Hasanovic A, Suehara Y, Lipson D, Stephens P, Ross J, Miller V, Ginsberg M, Zakowski MF, Kris MG, Ladanyi M, Rizvi N
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Journal Title
Cancer Discovery
Volume: 3
Issue: 6
Pages: 630-5
DOI
Related Report
Peer Reviewed
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[Journal Article] Gene expression network analysis of ETV1 reveals KCTD10 as a novel prognostic biomarker in gastrointestinal stromal tumor.2013
Author(s)
Kubota D, Yoshida A, Tsuda H, Suehara Y, Okubo T, Saito T, Orita H, Sato K, Taguchi T, Yao T, Kaneko K, Katai H, Kawai A, Kondo T.
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Journal Title
PLoS One.
Volume: 8
Issue: 8
Pages: e73896-e73896
DOI
Related Report
Peer Reviewed
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[Journal Article] The prognostic value of pfetin: a validation study in gastrointestinal stromal tumors using a commercially available antibody.2013
Author(s)
Kubota D, Mukaihara K, Yoshida A, Suehara Y, Saito T, Okubo T, Gotoh M, Orita H, Tsuda H, Kaneko K, Kawai A, Kondo T, Sato K, Yao T.
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Journal Title
Jpn J Clin Oncol.
Volume: 43
Issue: 6
Pages: 669-675
DOI
Related Report
Peer Reviewed
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[Presentation] Clinicopathological and functional analyses of protein phosphatase 2, regulatory subunit A, alpha mutations in gastrointestinal stromal cell tumors.2015
Author(s)
Suehara Y, Ishii M, Akaike K, Mukaihara K, Kubota D, Okubo T, Takagi T, Yao T, Kaneko K, Saito T.
Organizer
European Society For Medical Oncology - ASAIA
Place of Presentation
Singapore
Year and Date
2015-12-18
Related Report
Int'l Joint Research
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[Presentation] Clinicopathological impacts of protein phosphatase 2, regulatory subunit A, alpha mutations in gastrointestinal stromal tumors.2015
Author(s)
Ishii M, Suehara Y, Akaike K, Mukaihara K, Kubota D, Okubo T, Takagi T, Yao T, Kaneko K, Saito T.
Organizer
American Society of Clinical Oncology Annual Meeting
Place of Presentation
Chicago, USA
Year and Date
2015-05-29
Related Report
Int'l Joint Research
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[Presentation] Ewing肉腫EWS/FLI1融合遺伝子発現に関わる網羅的タンパク質発現解析2015
Author(s)
末原 義之, 高阪 真路, 向井原 健太, 赤池 慶祐, 石井 翠, 峯木 礼子, 藤村 努, 數野 彩子, 金子 和夫, Ladanyi Marc, 齋藤 剛
Organizer
第88回日本整形外科学会学術総会
Place of Presentation
神戸
Year and Date
2015-05-21
Related Report
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[Presentation] Proteomic approaches for defining the protein profiles of EWS/FLi1 in Ewing's sarcomas.2015
Author(s)
Suehara Y, Kohsaka S, Mukaihara K, Akaike K, Ishii M, Kubota D, Kazuno S, Mineki R, Fujimura T, Kaneko K, Ladanyi M, Saito T.
Organizer
the 61th Annual Meeting of the Orthopaedic Research Society
Place of Presentation
Las vegans, USA
Year and Date
2015-03-28 – 2015-03-31
Related Report
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[Presentation] Proteomic approaches for defining the protein profiles of EWS/FLi1 in patients with Ewing's sarcoma.2014
Author(s)
Suehara Y, Kohsaka S, Mukaihara K, Kubota D, Akaike K, Ishii M, Kazuno S, Mineki R, Fujimura T, Kaneko K, Ladanyi M, Saito T
Organizer
Connective Tissue Oncology Society, 2014 Annual Meeting
Place of Presentation
Berlin, Germany
Year and Date
2014-10-15 – 2014-10-18
Related Report
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