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Characterization and application of a novel dye-linked D-amino acid dehydrogenase

Research Project

Project/Area Number 25870271
Research Category

Grant-in-Aid for Young Scientists (B)

Allocation TypeMulti-year Fund
Research Field Applied biochemistry
Biofunction/Bioprocess
Research InstitutionUniversity of Fukui

Principal Investigator

Satomura Takenori  福井大学, 工学(系)研究科(研究院), 准教授 (50412317)

Research Collaborator SAKURABA HARUHIKO  香川大学, 農学部, 教授 (90205823)
OHSHIMA TOSHIHISA  大阪工業大学, 工学部, 教授 (10093345)
SUYE SHIN-ICHIRO  福井大学, 大学院工学研究科, 教授 (90206376)
Project Period (FY) 2013-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥4,290,000 (Direct Cost: ¥3,300,000、Indirect Cost: ¥990,000)
Fiscal Year 2015: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2014: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2013: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
KeywordsD-アミノ酸 / 色素依存性脱水素酵素 / 好熱菌 / ヒドロキシプロリン代謝 / 色素依存性D-アミノ酸脱水素酵素 / バイオセンサ / D-フェニルアラニン脱水素酵素
Outline of Final Research Achievements

The novel dye-lined D-amino acid dehydrogenase was found in thermophilic bacterium, Rhodothermus marinus. The primary structure of the enzyme was largely different from that of mesophilic dye-linked D-amino acid dehydrogenases so far reported. The dye-linked D-amino acid dehydrogenase was overexpressed in Escherichia coli, and its product was purified and characterized. When enzyme-catalyzed dehydrogenation of several D-amino acids was carried out using 2,6-dichloroindophenol as the electron acceptor, D-phenylalanine was the most preferable substrate among the D-amino acids tested. In addition, the enzyme was stable over a wide range of pH and did not also lose its activity by incubating 70 degrees C for 10 min. Thus, the highly thermostable dye-linked D-amino acid dehydrogenase exhibits a high potential usefulness for application to the D-amino acid bio-sensor.

Report

(4 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • 2013 Research-status Report
  • Research Products

    (5 results)

All 2015 2014 2013

All Journal Article (2 results) (of which Peer Reviewed: 2 results,  Acknowledgement Compliant: 1 results) Presentation (3 results)

  • [Journal Article] Dye-linked D-amino acid dehydrogenases: biochemical characteristics and applications in biotechnology2015

    • Author(s)
      Takenori Satomura, Haruhiko Sakuraba, Shin-ichiro Suye, Toshihisa Ohshima
    • Journal Title

      Applied Microbiology and Biotechnology

      Volume: 99 Issue: 22 Pages: 9337-9347

    • DOI

      10.1007/s00253-015-6944-z

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Dye-linked D-amino acid dehydrogenase from the thermophilic bacterium Rhodothermus marinus JCM 9785: characteristics and role in trans-4-hydroxy-L-proline catabolism.2015

    • Author(s)
      T. Satomura, H. Sakuraba, S. Suye, T. Ohshima
    • Journal Title

      Appl. Microbiol. Biotechnol.

      Volume: 99 Issue: 10 Pages: 4265-4275

    • DOI

      10.1007/s00253-014-6263-9

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] 好熱菌由来色素依存性D-アミノ酸脱水素酵素はL-ヒドロキシプロリンの代謝に関与する2014

    • Author(s)
      里村武範、石倉優、小柳峰史、櫻庭春彦、大島敏久、末信一朗
    • Organizer
      第66回日本生物工学会大会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2014-09-09
    • Related Report
      2014 Research-status Report
  • [Presentation] Rhodothermus marinus由来色素依存性D-フェニルアラニン脱水素酵素の特性と生理機能の解析2013

    • Author(s)
      里村武範, 石倉優, 小柳峰史, 廣田湧也, 櫻庭春彦, 大島敏久, 末信一朗
    • Organizer
      第65回日本生物工学会大会
    • Place of Presentation
      広島国際会議場
    • Related Report
      2013 Research-status Report
  • [Presentation] 好熱菌由来色素依存性D-アミノ酸脱水素酵素の発見と基質特異性の解析2013

    • Author(s)
      石倉優, 廣田湧也, 里村武範,櫻庭春彦, 大島敏久, 末信一朗
    • Organizer
      2013北陸合同バイオシンポジウム
    • Place of Presentation
      国民宿舎 能登小牧台
    • Related Report
      2013 Research-status Report

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Published: 2014-07-25   Modified: 2019-07-29  

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