Development of CRISPR/Cas system enabling advanced genome editing on chromosome level
Project/Area Number |
25890014
|
Research Category |
Grant-in-Aid for Research Activity Start-up
|
Allocation Type | Single-year Grants |
Research Field |
System genome science
|
Research Institution | Hiroshima University |
Principal Investigator |
SAKUMA TETSUSHI 広島大学, 理学(系)研究科(研究院), 特任助教 (90711143)
|
Project Period (FY) |
2013-08-30 – 2015-03-31
|
Project Status |
Completed (Fiscal Year 2014)
|
Budget Amount *help |
¥2,730,000 (Direct Cost: ¥2,100,000、Indirect Cost: ¥630,000)
Fiscal Year 2014: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2013: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
|
Keywords | ゲノム編集 / CRISPR/Cas9 / ゲノム生物工学 / 遺伝子ノックイン / CRISPR/Cas |
Outline of Final Research Achievements |
We developed a vector system enabling advanced genome editing such as simultaneous disruption of multiple genes and large chromosomal deletion, and evaluated its applicability in cultured cells and mice. In cultured cells, multiple targeted mutagenesis for up to seven genes and chromosomal deletion were demonstrated. In addition, it was shown that simultaneous gene disruption at multiple gene loci was feasible in mouse embryos by single plasmid injection using an all-in-one vector carrying FokI-dCas9, which is known as a highly-specific variant of Cas9.
|
Report
(3 results)
Research Products
(147 results)
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
[Journal Article] Sterol side chain reductase 2 is a key enzyme in the biosynthesis of cholesterol, the common precursor of toxic steroidal glycoalkaloids in potato2014
Author(s)
Sawai, S., Ohyama, K., Yasumoto, S., Seki, H., Sakuma, T., Yamamoto, T., Takebayashi, Y., Kojima, M., Sakakibara, H., Aoki, T., Muranaka, T., Saito, K., Umemoto, N.
-
Journal Title
The Plant Cell
Volume: 26
Issue: 9
Pages: 3763-3774
DOI
Related Report
Peer Reviewed / Open Access
-
[Journal Article] Down syndrome-associated haematopoiesis abnormalities created by chromosome transfer and genome editing technologies2014
Author(s)
Kazuki Y, Yakura Y, Abe S, Osaki M, Kajitani N, Kazuki K, Takehara S, Honma K, Suemori H, Yamazaki S, Sakuma T, Toki T, Shimizu R, Nakauchi H, Yamamoto T, Oshimura M
-
Journal Title
Scientific reports
Volume: 4
Issue: 1
Pages: 6136-6136
DOI
Related Report
Peer Reviewed / Open Access
-
[Journal Article] EDEM2 initiates mammalian glycoprotein ERAD by catalyzing the first mannose trimming step.2014
Author(s)
Ninagawa S, Okada T, Sumitomo Y, Kamiya Y, Kato K, Horimoto S, Ishikawa T, Takeda S, Sakuma T, Yamamoto T, Mori K
-
Journal Title
J Cell Biol.
Volume: 206
Issue: 3
Pages: 347-356
DOI
NAID
Related Report
Peer Reviewed / Open Access / Acknowledgement Compliant
-
-
-
-
-
-
[Journal Article] TALEN-mediated single-base-pair editing identification of an intergenic mutation upstream of BUB1B as causative of PCS (MVA) syndrome.2014
Author(s)
Ochiai H, Miyamoto T, Kanai A, Hosoba K, Sakuma T, Kudo Y, Asami K, Ogawa A, Watanabe A, Kajii T, Yamamoto T, Matsuura S.
-
Journal Title
Proc Natl Acad Sci U S A.
Volume: 111(4)
Issue: 4
Pages: 1461-6
DOI
Related Report
Peer Reviewed
-
[Journal Article] Tissue-specific and ubiquitous gene knockouts in Ciona by electroporating TALENs provide new approaches to investigate gene functions2014
Author(s)
Treen, N., Yoshida, K., Sakuma, T., Sasaki, H., Kawai, N., Yamamoto, T., Sasakura, Y.
-
Journal Title
Development
Volume: 141
Issue: 2
Pages: 481-487
DOI
Related Report
Peer Reviewed
-
-
-
[Journal Article] Targeted mutagenesis of multiple and paralogous genes in Xenopus laevis using two pairs of transcription activator-like effector nucleases2014
Author(s)
Sakane, Y., Sakuma, T., Kashiwagi, K., Kashiwagi, A., Yamamoto, T. and Suzuki, K. T.
-
Journal Title
Dev Growth Differ
Volume: 56(1)
Issue: 1
Pages: 108-114
DOI
Related Report
Peer Reviewed / Open Access
-
-
[Journal Article] Transcription activator-like effector nucleases efficiently disrupt the target gene in Iberian ribbed newts (Pleurodeles waltl), an experimental model animal for regeneration.2014
Author(s)
Hayashi T, Sakamoto K, Sakuma T, Yokotani N, Inoue T, Kawaguchi E, Agata K, Yamamoto T, Takeuchi T
-
Journal Title
Development, Growth and Differentiation
Volume: 56
Issue: 1
Pages: 115-121
DOI
Related Report
Peer Reviewed / Open Access
-
-
-
[Journal Article] Repeating pattern of non-RVD variations in DNA-binding modules enhances TALEN activity.2013
Author(s)
Sakuma T, Ochiai H, Kaneko T, Mashimo T, Tokumasu D, Sakane Y, Suzuki K, Miyamoto T, Sakamoto N, Matsuura S, Yamamoto T
-
Journal Title
Sci Rep.
Volume: 3
Issue: 1
Pages: 3379-3379
DOI
Related Report
Peer Reviewed
-
[Journal Article] Production of Sry knockout mouse using TALEN via oocyte injection.2013
Author(s)
Kato T, Miyata K, Sonobe M, Yamashita S, Tamano M, Miura K, Kanai Y, Miyamoto S, Sakuma T, Yamamoto T, Inui M, Kikusui T, Asahara H, Takada S.
-
Journal Title
Scientific reports
Volume: 3
Issue: 1
Pages: 3136-3136
DOI
Related Report
Peer Reviewed
-
-
-
-
-
-
[Presentation] MMEJ-mediated integration of donor DNA in cells and animals using TALENs and CRISPR/Cas92015
Author(s)
Shota Nakade, Takuya Tsubota, Yuto Sakane, Satoshi Kume, Naoaki Sakamoto, Masanobu Obara, Takaaki Daimon, Hideki Sezutsu, Takashi Yamamoto, Tetsushi Sakuma, Ken-ichi T. Suzuki
Organizer
Keystone Symposia: Precision Genome Engineering and Synthetic Biology
Place of Presentation
MT, USA
Year and Date
2015-01-11 – 2015-01-16
Related Report
-
[Presentation] Identification of Sterol Side Chain Reductase 2 (SSR2), a Key Enzyme in the Biosynthesis of Cholesterol As the Common Precursor of Toxic Steroidal Glycoalkaloids in Potato2015
Author(s)
Kazuki Saito, Satoru Sawai, Kiyoshi Ohyama, Shuhei Yasumoto, Hikaru Seki, Tetsushi Sakuma, Takashi Yamamoto, Yumiko Takebayashi, Mikiko Kojima, Hitoshi Sakakibara, Toshio Aoki, Toshiya Muranaka, Naoyuki Umemoto
Organizer
International Plant & Animal Genome XXIII
Place of Presentation
CA, USA
Year and Date
2015-01-10 – 2015-01-14
Related Report
Invited
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
[Presentation] Duchenne型筋ジストロフィーiPS細胞の遺伝子修復とゲノムワイド変異解析2014
Author(s)
李 紅梅, 藤本直子, 笹川典子, 白井紗矢, 大亀登紀子, 佐久間哲史, 田中道廣, 天野直己, 渡辺 亮, 櫻井英俊, 山本 卓, 山中伸弥, 堀田秋津
Organizer
第4 回ゲノム編集研究会
Place of Presentation
広島
Year and Date
2014-10-06 – 2014-10-07
Related Report
-
-
-
-
-
-
[Presentation] ゲノム編集のHIVへの応用2014
Author(s)
蝦名博貴, 金村優香, 三沢尚子, 佐久間哲史, 小林朋子, 山本 卓, 小柳義夫
Organizer
第4 回ゲノム編集研究会
Place of Presentation
広島
Year and Date
2014-10-06 – 2014-10-07
Related Report
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
[Presentation] Genome editing using Platinum TALENs2014
Author(s)
Tetsushi Sakuma, Ken-ichi Suzuki, Takashi Yamamoto
Organizer
FASEB Science Research Conference: Genome Engineering - Cutting-Edge Research and Applications
Place of Presentation
Nassau, Bahamas
Year and Date
2014-06-22 – 2014-06-27
Related Report
-
[Presentation] Ultra-rapid and highly efficient in vivo genome editing in mice2014
Author(s)
Tomomi Aida, Tetsushi Sakuma, Takako Usami, Harumi Ishikubo, Risa Imahashi, Keiho Chiyo, Pawel Obrocki, Takashi Yamamoto, Kohichi Tanaka
Organizer
FASEB Science Research Conference: Genome Engineering - Cutting-Edge Research and Applications
Place of Presentation
Nassau, Bahamas
Year and Date
2014-06-22 – 2014-06-27
Related Report
-
-
-
[Presentation] TALEN-mediated genome editing is very useful in Iberian ribbed newts (Pleurodeles waltl), an experimental model animal for regeneration2014
Author(s)
Toshinori Hayashi, Kousuke Sakamoto, Tetsushi Sakuma, Ayumi Myouga, Naoki Yokotani, Takeshi Inoue, Eri Kawaguchi, Kiyokazu Agata, Takashi Yamamoto, Takashi Takeuchi
Organizer
第47回日本発生生物学会
Place of Presentation
愛知
Year and Date
2014-05-27 – 2014-05-30
Related Report
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-
-