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Analysis of de novo germline mutations by using environmental genome stress-sensitive mice

Research Project

Project/Area Number 26281022
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Risk sciences of radiation and chemicals
Research InstitutionKyushu University

Principal Investigator

Ohno Mizuki  九州大学, 医学(系)研究科(研究院), 助教 (70380524)

Co-Investigator(Kenkyū-buntansha) 續 輝久  九州大学, 医学(系)研究科(研究院), 教授 (40155429)
Co-Investigator(Renkei-kenkyūsha) SAKUMI KUNIHIKO  九州大学, 生体防御研究所, 准教授 (50211933)
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥15,990,000 (Direct Cost: ¥12,300,000、Indirect Cost: ¥3,690,000)
Fiscal Year 2016: ¥5,460,000 (Direct Cost: ¥4,200,000、Indirect Cost: ¥1,260,000)
Fiscal Year 2015: ¥5,460,000 (Direct Cost: ¥4,200,000、Indirect Cost: ¥1,260,000)
Fiscal Year 2014: ¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Keywords生殖細胞変異 / ミスマッチ修復 / 次世代影響 / DNA修復 / 環境ストレス / ゲノム変異 / 生殖細胞 / 生物影響 / DNA損傷
Outline of Final Research Achievements

To clarify underlining mechanisms for spontaneous germline mutations, we attempted to analyze de novo germline mutations by whole exome sequencing using parents-offspring sample sets derived from mismatch repair (MMR)-deficient mice. We observed an increased mutation rate in MMR-deficient mice. DNM rate per generation was approximately 20-fold higher for base substitutions, and at least several hundred-fold higher rate for INDELs, compared with that of wild-type mice. Most of INDELs were found at dinucleotide-repeat sequences, namely minisatellite or microsatellite. The mutation pattern of DNMs detected in these mice is consistent with the pattern of somatic mutation of MMR-deficient human tumor, indicating that MMR plays a crucial role in the maintenance of germline genome integrity. Our experimental system for the detection of DNMs by using MMR-deficient mice family can be used for the assessment of the genetic effects of environmental mutagens.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • Research Products

    (20 results)

All 2016 2015

All Journal Article (2 results) (of which Peer Reviewed: 2 results,  Open Access: 2 results,  Acknowledgement Compliant: 2 results) Presentation (17 results) (of which Int'l Joint Research: 2 results,  Invited: 5 results) Book (1 results)

  • [Journal Article] Germline mutation rates and the long-term phenotypic effects of mutation accumulation in wild-type laboratory mice and mutator mice2015

    • Author(s)
      Arikuni Uchimura, Mayumi Higuchi, Yohei Minakuchi, Mizuki Ohno, Atsushi Toyoda, Asao Fujiyama, Ikuo Miura, Shigeharu Wakana, Jo Nishino, Takeshi Yagi
    • Journal Title

      Genome Research

      Volume: 25 Issue: 8 Pages: 1125-1134

    • DOI

      10.1101/gr.186148.114

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] PSMC5, a 19S Proteasomal ATPase, Regulates Cocaine Action in the Nucleus Accumbens.2015

    • Author(s)
      Ohnishi YH, Ohnishi YN, Nakamura T, Ohno M, Kennedy PJ, Yasuyuki O, Nishi A, Neve R, Tsuzuki T, Nestler EJ.
    • Journal Title

      PLoS One

      Volume: 10(5) Issue: 5 Pages: e0126710-e0126710

    • DOI

      10.1371/journal.pone.0126710

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] Regulation of base substitution mutagenesis and chromosome recombination induced by 8-oxoguanine accumulated in the genome2016

    • Author(s)
      大野みずき、作見邦彦、中別府雄作
    • Organizer
      日本分子生物学会
    • Place of Presentation
      横浜
    • Year and Date
      2016-12-03
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Maintenance of genome integrity: rate, causes and consequences of de novo germline mutation2016

    • Author(s)
      Mizuki Ohno
    • Organizer
      日本分子生物学会
    • Place of Presentation
      横浜
    • Year and Date
      2016-11-30
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] ミスマッチ修復欠損マウスを用いた新規生殖細胞変異の検出2016

    • Author(s)
      大野みずき, 鷹野 典子, 佐々木史子, 中津可道, 續輝久
    • Organizer
      日本環境変異原学会
    • Place of Presentation
      つくば
    • Year and Date
      2016-11-17
    • Related Report
      2016 Annual Research Report
  • [Presentation] ミスマッチDNA修復系が体細胞および生殖細胞ゲノムにおよぼす影響2016

    • Author(s)
      鷹野典子, 大野みずき, 佐々木史子, 中津 可道, 續輝久
    • Organizer
      日本遺伝学会
    • Place of Presentation
      三島
    • Year and Date
      2016-09-09
    • Related Report
      2016 Annual Research Report
  • [Presentation] 体細胞と生殖細胞のゲノム維持における酸化損傷DNAの修復機構の重要性2016

    • Author(s)
      大野みずき
    • Organizer
      日本遺伝学会
    • Place of Presentation
      三島
    • Year and Date
      2016-09-07
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] MUTYH欠損マウスを用いた酸化ストレス誘発消化管がんと体細胞突然変異の解析2015

    • Author(s)
      鷹野典子, 大野 みずき, 佐々木史子, 山内一己, 中別府 雄作, 中津 可道, 續 輝久
    • Organizer
      日本分子生物学会
    • Place of Presentation
      神戸
    • Year and Date
      2015-12-01
    • Related Report
      2015 Annual Research Report
  • [Presentation] ミスマッチ修復欠損マウスにおける生殖細胞ゲノム変異の解析2015

    • Author(s)
      大野 みずき, 鷹野典子, 佐々木史子, 日高京子, 中津 可道, 續 輝久
    • Organizer
      日本環境変異原学会
    • Place of Presentation
      福岡
    • Year and Date
      2015-11-27
    • Related Report
      2015 Annual Research Report
  • [Presentation] MUTYH欠損マウスを用いた酸化ストレス誘発消化管がんと体細胞突然変異の解析2015

    • Author(s)
      鷹野典子, 大野 みずき, 佐々木史子, 山内一己, 中別府 雄作, 中津 可道, 續 輝久
    • Organizer
      日本環境変異原学会
    • Place of Presentation
      福岡
    • Year and Date
      2015-11-27
    • Related Report
      2015 Annual Research Report
  • [Presentation] Analysis of oxidative stress-induced intestinal tumors in Trp53-deficient mice2015

    • Author(s)
      Li Zan, 大野 みずき, 鷹野典子, 佐々木史子, 日高京子, 中津 可道, 續 輝久
    • Organizer
      日本環境変異原学会
    • Place of Presentation
      福岡
    • Year and Date
      2015-11-27
    • Related Report
      2015 Annual Research Report
  • [Presentation] 生殖細胞自然突然変異の新規発生と変異アリールの伝達2015

    • Author(s)
      作見 邦彦, 大野 みずき, 古市 正人, 續 輝久, 中別府 雄作
    • Organizer
      日本環境変異原学会
    • Place of Presentation
      福岡
    • Year and Date
      2015-11-27
    • Related Report
      2015 Annual Research Report
  • [Presentation] 酸化ストレス誘発消化管発がんと突然変異の抑制におけるMUTYHの役割2015

    • Author(s)
      大野みずき, 鷹野 典子, 中津 可道, 中別府 雄作, 續 輝久
    • Organizer
      第74回日本癌学会学術総会
    • Place of Presentation
      名古屋
    • Year and Date
      2015-10-08
    • Related Report
      2015 Annual Research Report
  • [Presentation] Mth1, Ogg1, Mutyh 三重欠損マウス家系を用いた生殖細胞突然変異の解析2015

    • Author(s)
      作見 邦彦, 大野みずき, 権藤洋一, 續 輝久, 中別府 雄作
    • Organizer
      第74回日本癌学会学術総会
    • Place of Presentation
      名古屋
    • Year and Date
      2015-10-08
    • Related Report
      2015 Annual Research Report
  • [Presentation] 次世代ゲノム遺伝情報維持におけるミスマッチ修復の役割2015

    • Author(s)
      大野みずき, 鷹野典子, 佐々木史子, 中津 可道, 續 輝久
    • Organizer
      日本遺伝学会
    • Place of Presentation
      仙台
    • Year and Date
      2015-09-24
    • Related Report
      2015 Annual Research Report
  • [Presentation] Role of the oxidative DNA damage repair system in somatic and germline mutations in mice2015

    • Author(s)
      Mizuki Ohno, Noriko Takano, Kunihiko Sakumi, Ryutaro Fukumura, Yuki Iwasaki, Toshimichi Ikemura, Yoichi Gondo, Yusaku Nakabeppu,Yoshimichi Nakatsu, Teruhisa Tsuzuki
    • Organizer
      Zing conference Genomic integlity
    • Place of Presentation
      Cairns, Australia
    • Year and Date
      2015-08-01 – 2015-08-05
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Role of the oxidative DNA damage repair system in somatic and germline mutations in mice2015

    • Author(s)
      Mizuki Ohno, Noriko Takano, Kunihiko Sakumi, Ryutaro Fukumura, Yuki Iwasaki, Toshimichi Ikemura, Yoichi Gondo, Yusaku Nakabeppu, Yoshimichi Nakatsu, Teruhisa Tsuzuki
    • Organizer
      Zing conference "Genome Integrity"
    • Place of Presentation
      Cairns, Australia
    • Year and Date
      2015-07-31
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Influence of oxidative DNA damage on the rate of somatic and germline mutation2015

    • Author(s)
      Mizuki Ohno, Noriko Takano, Kunihiko Sakumi, Ryutaro Fukumura, Yuki Iwasaki, Toshimichi Ikemura, Yoichi Gondo, Yusaku Nakabeppu,Yoshimichi Nakatsu, Teruhisa Tsuzuki
    • Organizer
      15th International Congress of Radiation Research
    • Place of Presentation
      Kyoto, Japan
    • Year and Date
      2015-05-25 – 2015-05-29
    • Related Report
      2014 Annual Research Report
  • [Presentation] Influence of oxidative DNA damage on the rate of somatic and germline mutation2015

    • Author(s)
      Ohno Mizuki, Takano Noriko, SAKUMI Kunihiko, Ryutaro Fukumura, Yuki Iwasaki, Toshimichi Ikemura, Yoichi Gondo, Yusaku Nakabeppu, Yoshimichi Nakatsu, Teruhisa Tsuzuki
    • Organizer
      15th International Congress of Radiation Research
    • Place of Presentation
      Kyoto
    • Year and Date
      2015-05-25
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Book] Thresholds of Genotoxic Carcinogens From Mechanisms to Regulation Chapter 4: Possible mechanisms underlining genotoxic thresholds: DNA repair and translesion DNA synthesis2016

    • Author(s)
      Nohmi, T., Tsuzuki, T.
    • Total Pages
      210
    • Publisher
      Academic Press
    • Related Report
      2016 Annual Research Report

URL: 

Published: 2014-04-04   Modified: 2018-03-22  

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