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Mechanism of the nuclear retention of unspoiled RNAs that ensures proper expression of genomic information

Research Project

Project/Area Number 26290062
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Genome biology
Research InstitutionKobe University

Principal Investigator

Sakamoto Hiroshi  神戸大学, 理学(系)研究科(研究院), 教授 (00187048)

Co-Investigator(Kenkyū-buntansha) 井上 邦夫  神戸大学, 理学(系)研究科(研究院), 教授 (40252415)
鈴木 穣  東京大学, 新領域創成科学研究科, 教授 (40323646)
中井 謙太  東京大学, 医科学研究所, 教授 (60217643)
Research Collaborator FUKUMOTO Shoichi  
AIZAWA Risuke  
MIWA Takashi  
TAKASAKI Teruaki  
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥17,420,000 (Direct Cost: ¥13,400,000、Indirect Cost: ¥4,020,000)
Fiscal Year 2016: ¥5,460,000 (Direct Cost: ¥4,200,000、Indirect Cost: ¥1,260,000)
Fiscal Year 2015: ¥5,460,000 (Direct Cost: ¥4,200,000、Indirect Cost: ¥1,260,000)
Fiscal Year 2014: ¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
Keywordsゲノム機能発現 / 遺伝子発現調節 / RNAスプライシング / 核外輸送 / 品質管理 / 翻訳制御 / ゲノム / スプライシング / RNAの核外輸送
Outline of Final Research Achievements

NXF-1 and CRM1 are well conserved among eukaryotes and act as nuclear export receptors for mRNAs and snRNAs, respectively. EJC is a complex formed just upstream of exon-exon junctions after pre-mRNA splicing and has various functions in RNA metabolism. Depletion of Y14, a core component of EJC, in the Nematode C. elegans, results in the cytoplasmic leakage of unspliced RNAs, which depends on CRM1 and NXF-2, an NXF-1-like protein. Analysis of C. elegans and cultured cells expressing epitope-tagged NXF-2 showed that NXF-2 interacts with both NXT-1, a nuclear export factor, and eIF4E, a translation initiation factor, and functions as a translation activator when tethered on mRNA.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • Research Products

    (10 results)

All 2016 2015 2014

All Journal Article (4 results) (of which Peer Reviewed: 4 results,  Open Access: 2 results,  Acknowledgement Compliant: 3 results) Presentation (6 results)

  • [Journal Article] The Exon Junction Complex controls the efficient and faithful splicing of a subset of transcripts involved in mitotic cell-cycle progression.2016

    • Author(s)
      Fukumura, K., Wakabayashi, S., Kataoka, N., Sakamoto, H., ;Suzuki, Y., ;Nakai, K., Mayeda, A., Inoue, K.
    • Journal Title

      International Journal of Molecular Sciences

      Volume: 17 Issue: 8 Pages: 1153-1153

    • DOI

      10.3390/ijms17081153

    • NAID

      120005838148

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Control of the heat stress-induced alternative splicing of a subset of genes by hnRNP K.2016

    • Author(s)
      Yamamoto K, Furukawa M, Fukumura K, Kawamura A, Yamada T, Suzuki H, Hirose T, Sakamoto H, Inoue K.
    • Journal Title

      Genes Cells.

      Volume: 21 Issue: 9 Pages: 1006-1014

    • DOI

      10.1111/gtc.12400

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Restricted distribution of mrg-1 mRNA in C. elegans primordial germ cells through germ granule-independent regulation2015

    • Author(s)
      Miwa, T., Takasaki, T., Inoue, K., Sakamoto, H.
    • Journal Title

      Genes to Cells

      Volume: 20 Issue: 11 Pages: 932-942

    • DOI

      10.1111/gtc.12285

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Interaction and colocalization of HERMES/RBPMS with NonO, PSF, and G3BP1 in neuronal cytoplasmic RNP granules in mouse retinal line cells.2015

    • Author(s)
      Furukawa, M.T., Sakamoto, H., and Inoue, K.
    • Journal Title

      Genes to Cells

      Volume: 20 Issue: 4 Pages: 257-266

    • DOI

      10.1111/gtc.12224

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] 線虫C. elegansの生殖細胞形成に必須なクロマチン制御因子群の始原生殖細胞への限局機構の解析2015

    • Author(s)
      巳波孝至、井上邦夫、坂本博、高崎輝恒
    • Organizer
      第38回日本分子生物学会
    • Place of Presentation
      神戸国際展示場(兵庫県・神戸市)
    • Year and Date
      2015-12-01
    • Related Report
      2015 Annual Research Report
  • [Presentation] 線虫C. elegansの始原生殖細胞成熟過程におけるクロマチン制御機構の研究2015

    • Author(s)
      巳波孝至、高崎輝恒、井上邦夫、坂本博
    • Organizer
      関西地区線虫勉強会
    • Place of Presentation
      関西学院大学梅田キャンパス(大阪府・大阪市)
    • Year and Date
      2015-10-15
    • Related Report
      2015 Annual Research Report
  • [Presentation] 線虫C.elegansの生殖細胞形成に必須なクロマチン制御因子群の始原生殖細胞への限局機構の解析2015

    • Author(s)
      巳波孝至、高崎輝恒、井上邦夫、坂本博
    • Organizer
      第17回RNA学会年会
    • Place of Presentation
      ホテルライフォート札幌(北海道・札幌市)
    • Year and Date
      2015-07-15
    • Related Report
      2015 Annual Research Report
  • [Presentation] 線虫C.elegansにおけるRNAの輸送経路を決めるメカニズムの解析2014

    • Author(s)
      相澤理丞、井上邦夫、坂本博
    • Organizer
      第37回日本分子生物学会
    • Place of Presentation
      パシフィコ横浜、横浜市
    • Year and Date
      2014-11-25 – 2014-11-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] 線虫C.elegansにおけるクロモドメイン蛋白質MRG-1の始原生殖細胞への限局メカニズムの解析2014

    • Author(s)
      巳波孝至、井上邦夫、坂本博、高崎輝恒
    • Organizer
      第37回日本分子生物学会
    • Place of Presentation
      パシフィコ横浜、横浜市
    • Year and Date
      2014-11-25 – 2014-11-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] 線虫C. elegansにおけるRNAの輸送経路を決める機構の解析2014

    • Author(s)
      相澤理丞、井上邦夫、坂本博
    • Organizer
      関西地区線虫勉強会
    • Place of Presentation
      関西学院大学梅田キャンパス、大阪市
    • Year and Date
      2014-10-23
    • Related Report
      2014 Annual Research Report

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Published: 2014-04-04   Modified: 2018-03-22  

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