• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Molecular mechanism of the structural formation and functional regulation of the V1 rotary motor

Research Project

Project/Area Number 26291009
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Structural biochemistry
Research InstitutionChiba University

Principal Investigator

Murata Takeshi  千葉大学, 大学院理学研究科, 教授 (80415322)

Co-Investigator(Renkei-kenkyūsha) MIZUTANI Kenji  横浜市立大学, 生命医科学研究科, 助教 (10525570)
YAMATO Ichiro  東京理科大学, 基礎工学部, 教授 (70111458)
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥16,250,000 (Direct Cost: ¥12,500,000、Indirect Cost: ¥3,750,000)
Fiscal Year 2016: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Fiscal Year 2015: ¥7,020,000 (Direct Cost: ¥5,400,000、Indirect Cost: ¥1,620,000)
Fiscal Year 2014: ¥7,020,000 (Direct Cost: ¥5,400,000、Indirect Cost: ¥1,620,000)
KeywordsV-ATPase / 回転分子モーター / X線結晶構造解析 / 分子モーター / 構造解析
Outline of Final Research Achievements

V-ATPases function as ATP-dependent ion pumps, the hydrophilic V1 portion is known as rotary motor in which a central axis DF complex rotates inside a hexagonally arranged catalytic A3B3 complex using ATP hydrolysis energy. We previously succeeded in obtaining the crystal structures of the A3B3 complex which is a three-fold assembly of the identical A1B1 pair, but showed asymmetrical hexamer ring structure. In this study, we elucidated the crystal structures and biochemical properties of the A-subunit, B-subunit, A1B1 complex, and A3B3 mutant. Based on these and previous findings, we propose a molecular mechanism model of the structural formation and functional regulation of the V1 rotary motor.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • Research Products

    (17 results)

All 2016 2015 2014

All Journal Article (8 results) (of which Peer Reviewed: 6 results,  Open Access: 2 results,  Acknowledgement Compliant: 2 results) Presentation (8 results) (of which Int'l Joint Research: 1 results,  Invited: 8 results) Book (1 results)

  • [Journal Article] Crystal structures of the ATP-binding and ADP-release dwells of the V1 rotary motor.2016

    • Author(s)
      Kano Suzuki, Kenji Mizutani, Shintaro Maruyama, Kazumi Shimono, Fabiana L. Imai, Eiro Muneyuki, Yoshimi Kakinuma, Yoshiko Ishizuka-Katsura, Mikako Shirouzu, Shigeyuki Yokoyama, Ichiro Yamato, and Takeshi Murata
    • Journal Title

      Nature Communications

      Volume: 7 Issue: 1 Pages: 13235-13235

    • DOI

      10.1038/ncomms13235

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Operating principles of rotary molecular motors: differences between F<sub>1</sub> and V<sub>1</sub> motors2016

    • Author(s)
      Ichiro Yamato, Yoshimi Kakinuma, Takeshi Murata
    • Journal Title

      Biophysics and Physicobiology

      Volume: 13 Issue: 0 Pages: 37-44

    • DOI

      10.2142/biophysico.13.0_37

    • NAID

      130005129245

    • ISSN
      2189-4779
    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Rotational mechanism of Enterococcus hirae V1-ATPase by crystal-structure and single-molecule analysis2015

    • Author(s)
      Iino R, Minagawa Y, Ueno H, Suzuki K, and Murata T
    • Journal Title

      Current Opinion in Structural Biology

      Volume: 31 Pages: 49-56

    • DOI

      10.1016/j.sbi.2015.02.013

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Infrared spectroscopic studies on the V-ATPase2015

    • Author(s)
      H. Kandori*, Y. Furutani, T. Murata
    • Journal Title

      Biochim. Biophys Acta

      Volume: 1847 Issue: 1 Pages: 134-141

    • DOI

      10.1016/j.bbabio.2014.07.020

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Torque generation of Enterococcus hirae V-ATPase2014

    • Author(s)
      Ueno H, Minagawa Y, Hara M, Rahman S, Yamato I, Muneyuki E, Murata T, and Iino R
    • Journal Title

      The Journal of Biological Chemistry

      Volume: 289 Issue: 45 Pages: 31212-31223

    • DOI

      10.1074/jbc.m114.598177

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Molecular structure and rotary dynamics of Enterococcus hirae V1-ATPase2014

    • Author(s)
      Iino R, Minagawa Y, Ueno H, Hara M, and Murata T
    • Journal Title

      IUBMB Life

      Volume: 66 Issue: 9 Pages: 624-630

    • DOI

      10.1002/iub.1311

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] 膜超分子モーター(V-ATPase)の分子メカニズム2014

    • Author(s)
      村田武士
    • Journal Title

      実験医学

      Volume: 32 Pages: 1623-1626

    • Related Report
      2014 Annual Research Report
  • [Journal Article] 非対称結晶構造からみえてきたV1-ATPaseの回転メカニズム2014

    • Author(s)
      鈴木花野、村田武士
    • Journal Title

      医学のあゆみ

      Volume: 249 Pages: 551-552

    • Related Report
      2014 Annual Research Report
  • [Presentation] 結晶構造からわかる回転機動分子の機能発現機構2016

    • Author(s)
      村田武士
    • Organizer
      日本化学会第96春季年会
    • Place of Presentation
      同志社大学
    • Year and Date
      2016-03-27
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 膜蛋白質の耐熱化と発現・精製2016

    • Author(s)
      村田武士
    • Organizer
      日本蛋白質科学会
    • Place of Presentation
      福岡国際会議場(福岡県・福岡市)
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Ion transporting mechanism of V-ATPase2015

    • Author(s)
      Takeshi Murata
    • Organizer
      第53回日本生物物理学会
    • Place of Presentation
      金沢大学
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] Rotational mechanism of Enterococcus hirae V1-ATPase2015

    • Author(s)
      Takeshi Murata
    • Organizer
      Gordon Research Conference in Molecular and Cellular Bioenergetics
    • Place of Presentation
      Proctor academy
    • Year and Date
      2015-06-22
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 創薬標的膜タンパク質の構造解析法について2015

    • Author(s)
      村田武士
    • Organizer
      第56回日本生化学会中国四国支部例会
    • Place of Presentation
      島根大学
    • Year and Date
      2015-05-29
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] ヒト膜タンパク質の大量発現・精製・結晶化の技術開発2014

    • Author(s)
      村田 武士
    • Organizer
      平成26年度日本結晶学会年会
    • Place of Presentation
      東京大学農学部 弥生講堂・一条ホール
    • Year and Date
      2014-11-03
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Crystallization methods of membrane proteins2014

    • Author(s)
      村田 武士
    • Organizer
      第52回日本生物物理学会
    • Place of Presentation
      札幌コンベンションセンター
    • Year and Date
      2014-09-25
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 相関構造解析によるV1モーターの回転メカニズム2014

    • Author(s)
      村田 武士
    • Organizer
      第14回蛋白質科学会
    • Place of Presentation
      ワークピア横浜/横浜産貿ホール
    • Year and Date
      2014-06-25
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Book] Function and Regulation of Mammalian V-ATPase Isoforms, Regulation of Ca2+-ATPase, V-ATPases and F-ATPases, Advances in Biochemistry in Health and Disease 142016

    • Author(s)
      Suhaila Rahman, Ichiro Yamato, Takeshi Murata
    • Total Pages
      17
    • Publisher
      Springer International Publishing
    • Related Report
      2015 Annual Research Report

URL: 

Published: 2014-04-04   Modified: 2018-03-22  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi