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Structural analysis of the axonemal dynein responsible for ciliary/flagellar beating

Research Project

Project/Area Number 26291014
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Structural biochemistry
Research InstitutionOsaka University

Principal Investigator

Kurisu Genji  大阪大学, たんぱく質研究所, 教授 (90294131)

Project Period (FY) 2014-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥16,640,000 (Direct Cost: ¥12,800,000、Indirect Cost: ¥3,840,000)
Fiscal Year 2016: ¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2015: ¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2014: ¥6,240,000 (Direct Cost: ¥4,800,000、Indirect Cost: ¥1,440,000)
Keywords生体運動 / 構造生物学 / 分子モーター / 構造解析 / 生物物理 / 蛋白質 / 生体分子 / X線結晶解析
Outline of Final Research Achievements

Dynein motors are biologically important bio-nanomachines, and many atomic resolution structures of cytoplasmic dynein components from different organisms have been analyzed by X-ray crystallography, cryo-EM and NMR spectroscopy. However, atomic data are very much focused on cytoplasmic dyneins and remarkably less structural work on axonemal dyneins has been reported. This project provided structural studies of axonemal dynein including accessory proteins. My team performed mutational and structural studies of the interaction between the axonemal dynein light chain-1 (LC1) and the microtubule-binding domain (MTBD) of outer arm dynein gamma (OADγ), and tried to overexpress the axonemal dynein motor domain and crystallize the axonemal dynein stalk region. Based on the results mentioned above, we can discuss about the structural basis for the LC1-MTBD complex formation that might regulate the function of axonemal dynein heavy chain in different way from that of cytoplasmic dynein.

Report

(5 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Annual Research Report
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • Research Products

    (26 results)

All 2018 2017 2016 2015 2014 Other

All Int'l Joint Research (2 results) Journal Article (6 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 6 results,  Open Access: 2 results,  Acknowledgement Compliant: 2 results) Presentation (17 results) (of which Int'l Joint Research: 8 results,  Invited: 3 results) Remarks (1 results)

  • [Int'l Joint Research] University of Connecticut(米国)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] University of Leeds/Astbury Centre(United Kingdom)

    • Related Report
      2016 Annual Research Report
  • [Journal Article] Structural atlas of dynein motors at atomic resolution2018

    • Author(s)
      Akiyuki Toda, Hideaki Tanaka, Genji Kurisu
    • Journal Title

      Biophys Rev.

      Volume: 10 Issue: 2 Pages: 677-686

    • DOI

      10.1007/s12551-018-0402-y

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Elastic properties of dynein motor domain obtained from all-atom molecular dynamics simulations2016

    • Author(s)
      Narutoshi Kamiya, Tadaaki Mashimo, Yu Takano, Takahide Kon, Genji Kurisu, Haruki Nakamura
    • Journal Title

      Protein Engineering, Design and Selection

      Volume: 29 Issue: 8 Pages: 317-325

    • DOI

      10.1093/protein/gzw022

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Bacterial β-Glucosidase Reveals the Structural and Functional Basis of Genetic Defects in Human Glucocerebrosidase 2 (GBA2)2016

    • Author(s)
      Charoenwattanasatien, R., Pengthaisong, S., Breen, I., Mutoh, R., Sansenya, S., Hua, Y., Tankrathok, A., Wu, L., Songsiriritthigul, C., Tanaka, H., Williams, S.J., Davies, G.J., Kurisu, G., Cairns, J.R.
    • Journal Title

      ACS Chem Biol.

      Volume: 11 Issue: 7 Pages: 1891-1900

    • DOI

      10.1021/acschembio.6b00192

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] A structural view of synthetic cofactor integration into [FeFe]-hydrogenases2016

    • Author(s)
      Esselborn, J., Muraki, N., Klein, K., Engelbrecht, V., Metzler-Nolte, N., Apfel, U.P., Hofmann, E., Kurisu, G., Happe, T.
    • Journal Title

      Chemical Science

      Volume: 7 Issue: 2 Pages: 959-968

    • DOI

      10.1039/c5sc03397g

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Structural Change in the Dynein Stalk Region Associated with Two Different Affinities for the Microtubule.2016

    • Author(s)
      Y.Nishikawa, M.Inatomi, H.Iwasaki, G.Kurisu
    • Journal Title

      J.Mol.BIol.

      Volume: n/a Issue: 9 Pages: 1886-1896

    • DOI

      10.1016/j.jmb.2015.11.008

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Structure of the entire stalk region of the dynein motor domain2014

    • Author(s)
      Yosuke Nishikawa, Takuji Oyama, Narutoshi Kamiya, Takahide Kon, Yoko Y. Toyoshima, Haruki Nakamura, Genji Kurisu
    • Journal Title

      Journal of Molecular Biology

      Volume: 426 Issue: 19 Pages: 3232-3245

    • DOI

      10.1016/j.jmb.2014.06.023

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Presentation] Structural Change in the Dynein Motor Domain Associated with two Different Affinities for the Microtubule2018

    • Author(s)
      Kurisu, G
    • Organizer
      Japan-Korea Bilateral Symposium between SNU and IPR on Structure and Folding of Disease Related Proteins, Seoul, Korea
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Structural insights into complex formation of the axonemal dynein light chain-1 and OADγ stalk2018

    • Author(s)
      Toda, A., Tanaka, H., Nishikawa, Y., Yagi, T., Kurisu, G.
    • Organizer
      62th Annual Meeting Biophysic Society, CA,USA
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Structure-Function Relationships of the Dynein Stalk2017

    • Author(s)
      Kurisu, G
    • Organizer
      IPR-Astbury Mini-Symposium “Integrative Structural and Chemical Biology”, UK
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Structure-Function Relationships of the Dynein Stalk2017

    • Author(s)
      Kurisu, G
    • Organizer
      The Third Trilateral Workshop for Frontier Protein Studies 2017, 上海 China
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 細胞質ダイニンのマルチスケールシミュレーション:全原子から連続体へ2017

    • Author(s)
      飯田 慎仁, Hanson Benjamin, 神谷 成敏, 栗栖 源嗣, 昆 隆英, 中村 春木, Harris Sarah
    • Organizer
      第55回日本生物物理学会年会, 熊本市
    • Related Report
      2017 Annual Research Report
  • [Presentation] Structural insights into complex formation of the axonemal dynein light chain-1 and OADγ stalk2017

    • Author(s)
      Toda, A., Tanaka, H., Nishikawa, Y., Yagi, T., Kurisu, G.
    • Organizer
      International Workshop Dynein 2017, 淡路島市
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Structural Change in the Dynein Motor Domain Associated with two Different Affinities for the Microtubule2017

    • Author(s)
      Kurisu, G
    • Organizer
      Structural Biology Brussels, Brussel Belgium
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Structural analysis of Calredoxin from Chlamydomonas reinhardtii2016

    • Author(s)
      Charoenwattanasatien Ratana, 武藤 梨沙, 田中 秀明, 松本 崇, 小田 隆, 佐藤 衛, Hippler Michael, 栗栖 源嗣
    • Organizer
      第54回日本生物物理学会年会
    • Place of Presentation
      つくば国際会議場(茨城県、つくば市)
    • Year and Date
      2016-11-25
    • Related Report
      2016 Annual Research Report
  • [Presentation] X線結晶構造解析による軸糸ダイニン軽鎖1の構造評価2016

    • Author(s)
      戸田 暁之, 田中 秀明, 西河 洋祐, 八木 俊樹, 栗栖 源嗣
    • Organizer
      第54回日本生物物理学会年会
    • Place of Presentation
      つくば国際会議場(茨城県、つくば市)
    • Year and Date
      2016-11-25
    • Related Report
      2016 Annual Research Report
  • [Presentation] 軸糸ダイニン軽鎖1の結晶構造と構造評価2016

    • Author(s)
      戸田暁之・田中秀明・西河洋祐・八木俊樹・栗栖源嗣
    • Organizer
      日本結晶学会平成28年度年会および会員総会
    • Place of Presentation
      茨城県立県民文化センター (茨城県、水戸市)
    • Year and Date
      2016-11-17
    • Related Report
      2016 Annual Research Report
  • [Presentation] C. reinhardtii由来FNRのX線結晶構造解析2016

    • Author(s)
      古谷茜・田中秀明・栗栖源嗣
    • Organizer
      日本結晶学会平成28年度年会および会員総会
    • Place of Presentation
      茨城県立県民文化センター( 茨城県水戸市 )
    • Year and Date
      2016-11-17
    • Related Report
      2016 Annual Research Report
  • [Presentation] カルシウム依存性レドックス蛋白質の構造解析2016

    • Author(s)
      栗栖 源嗣
    • Organizer
      第21回 産学高分子研究会
    • Place of Presentation
      大阪大学基礎工学研究科シグマホール(大阪府、豊中市)
    • Year and Date
      2016-06-16
    • Related Report
      2016 Annual Research Report
  • [Presentation] Updated structure of the dynein stalk region from the Mus Musculus cytoplasmic dynein2015

    • Author(s)
      西河洋祐,稲富桃子,岩﨑遥華,栗栖源嗣
    • Organizer
      Asian Crystallographic Association
    • Place of Presentation
      Kolkata Science City, Kolkata (India)
    • Year and Date
      2015-12-05
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] レジストリーの異なるダイニンストーク領域の二次構造解析2015

    • Author(s)
      岩﨑遥華,西河洋祐,稲富桃子,田中秀明,栗栖源嗣
    • Organizer
      日本生物物理学会
    • Place of Presentation
      金沢大学(石川県金沢市)
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] Structure and function of the cytoplasmic dynein motor2015

    • Author(s)
      栗栖源嗣
    • Organizer
      Molecular and Cellular Life Sciences (MCLS2015)
    • Place of Presentation
      Pullman Surabaya City Center Hotel, Surabaya (Indonesia)
    • Year and Date
      2015-05-07
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Structure and function of the dynein motor domain2014

    • Author(s)
      Kurisu G.
    • Organizer
      9th International Symposium of the Protein Society of Thailand
    • Place of Presentation
      Bangkok, Thailand
    • Year and Date
      2014-08-06 – 2014-08-08
    • Related Report
      2014 Annual Research Report
  • [Presentation] Structure of the entire stalk region of dynein motor domain2014

    • Author(s)
      Nishikawa Y., Oyama T., Kamiya N., Kon T., Toyoshima Y.Y., Nakamura H., Kurisu G.
    • Organizer
      Asia Pacific Protein Association
    • Place of Presentation
      Jeju, Korea
    • Year and Date
      2014-05-17 – 2014-05-20
    • Related Report
      2014 Annual Research Report
  • [Remarks] 研究プロジェクト

    • URL

      http://www.protein.osaka-u.ac.jp/crystallography/LabHP/RESEARCH.html

    • Related Report
      2017 Annual Research Report

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Published: 2014-04-04   Modified: 2022-02-28  

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