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Regulation of DNA replication through proteolysis coupled with PCNA cycle

Research Project

Project/Area Number 26291025
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Functional biochemistry
Research InstitutionUniversity of Hyogo

Principal Investigator

Nishitani Hideo  兵庫県立大学, 生命理学研究科, 教授 (40253455)

Co-Investigator(Kenkyū-buntansha) 塩見 泰史  兵庫県立大学, 生命理学研究科, 准教授 (80380567)
Co-Investigator(Renkei-kenkyūsha) HAYASHI Akiyo  兵庫県立大学, 大学院生命理学研究科, 助教 (20779350)
Project Period (FY) 2014-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥16,120,000 (Direct Cost: ¥12,400,000、Indirect Cost: ¥3,720,000)
Fiscal Year 2017: ¥3,120,000 (Direct Cost: ¥2,400,000、Indirect Cost: ¥720,000)
Fiscal Year 2016: ¥2,990,000 (Direct Cost: ¥2,300,000、Indirect Cost: ¥690,000)
Fiscal Year 2015: ¥7,020,000 (Direct Cost: ¥5,400,000、Indirect Cost: ¥1,620,000)
Fiscal Year 2014: ¥2,990,000 (Direct Cost: ¥2,300,000、Indirect Cost: ¥690,000)
Keywordsタンパク質分解 / ゲノムDNA / 複製 / 修復 / 細胞周期 / DNA / タンパク質 / 分解 / DNA損傷 / 核酸
Outline of Final Research Achievements

The CRL4-Cdt2 ubiquitin ligase plays an important role to prevent re-replication by targeting Cdt1 for degradation. In this project, we demonstrated that C-terminus of Cdt2 contributes to its association with PCNA upon initiation of S phase for rapid Cdt1 degradation. Purified proteins confirmed that the interaction is direct. On the other hand, Cdt2 is phosphorylated by cyclin-CDKs, which appeared to be important to inhibit its interaction with PCNA. Thus, CRL4-Cdt2 activity is regulated through the cell cycle. In addition, we showed that in response to UV damage, not only nucleotide repair but also mismatch repair participate in Cdt1 degradation for efficient repair of UV damages.

Report

(5 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Annual Research Report
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • Research Products

    (29 results)

All 2018 2017 2016 2015 2014 Other

All Journal Article (7 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 7 results,  Open Access: 4 results,  Acknowledgement Compliant: 5 results) Presentation (19 results) (of which Int'l Joint Research: 1 results) Remarks (3 results)

  • [Journal Article] Mutations at multiple CDK phosphorylation consensus sites on Cdt2 increase the affinity of CRL4Cdt2 for PCNA and its ubiquitination activity in S phase.2018

    • Author(s)
      Nukina K, Hayashi A, Shiomi Y, Sugasawa K, Ohtsubo M, Nishitani H.
    • Journal Title

      Genes Cells.

      Volume: 23 Issue: 3 Pages: 200-213

    • DOI

      10.1111/gtc.12563

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Thymine DNA glycosylase modulates the DNA damage response and gene expression by base excision repair-dependent and -independent mechanisms2017

    • Author(s)
      Tomohumi Nakamura, Kouichi Murakami, Haruto Tada, Yoshihiko Uehara, Jumpei Nogami, Kazumitsu Maehara, Yasuyuki Ohkawa, Hisato Saitoh, Hideo Nishitani, Tetsuya Ono, Ryotaro Nishi, Masayuki Yokoi, Wataru Sakai, and Kaoru Sugasawa
    • Journal Title

      Genes to Cells

      Volume: 22 Issue: 4 Pages: 392-405

    • DOI

      10.1111/gtc.12481

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Control of Genome Integrity by RFC Complexes; Conductors of PCNA Loading onto and Unloading from Chromatin during DNA Replication.2017

    • Author(s)
      Shiomi Y, Nishitani H.
    • Journal Title

      Genes

      Volume: 8 Issue: 2 Pages: 52-52

    • DOI

      10.3390/genes8020052

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Mismatch repair proteins recruited to ultraviolet light-damaged sites lead to degradation of licensing factor Cdt1 in the G1 phase.2017

    • Author(s)
      Tanaka M, Takahara M, Nukina K, Hayashi A, Sakai W, Sugasawa K, Shiomi Y, Nishitani H.
    • Journal Title

      Cell Cycle

      Volume: 16 Issue: 7 Pages: 673-684

    • DOI

      10.1080/15384101.2017.1295179

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Mitotic UV Irradiation Induces a DNA Replication-Licensing Defect that Potentiates G1 Arrest Response.2015

    • Author(s)
      Morino M, Nukina K, Sakaguchi H, Maeda T, Takahara M, Shiomi Y, Nishitani H.
    • Journal Title

      PLoS One

      Volume: 10 Issue: 3 Pages: e0120553-e0120553

    • DOI

      10.1371/journal.pone.0120553

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] PCNA-dependent ubiquitination of Cdt1 and p21 in mammalian cells.2014

    • Author(s)
      Hayashi A, Suenaga N, Shiomi Y, Nishitani H.
    • Journal Title

      Methods Mol Biol.

      Volume: 1170 Pages: 367-82

    • DOI

      10.1007/978-1-4939-0888-2_19

    • ISBN
      9781493908875, 9781493908882
    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Imaging analysis to determine chromatin binding of licensing factors MCM2-7 in mammalian cells.2014

    • Author(s)
      Mayayuki Morino, Miyuki Tanaka, Yasuhi Shiomi, Hideo Nishitani
    • Journal Title

      Methods Mol Biol.

      Volume: 1170 Pages: 529-537

    • DOI

      10.1007/978-1-4939-0888-2_29

    • ISBN
      9781493908875, 9781493908882
    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] DNA複製ライセンス化因子 Cdt1の M期における機能の解析2017

    • Author(s)
      羽多野 達也、前田 武志、村上 裕輔、林 晃世、塩見 泰史、西谷 秀男
    • Organizer
      2017年度生命科学系学会合同年次大会(ConBio2017)
    • Related Report
      2017 Annual Research Report
  • [Presentation] 転写因子 E2F1の N末端領域に対する新規相互作用因子 WDR1の機能解析2017

    • Author(s)
      根岸 泰明、荒木 啓吾、西谷 秀男、大谷 清
    • Organizer
      2017年度生命科学系学会合同年次大会(ConBio2017)
    • Related Report
      2017 Annual Research Report
  • [Presentation] 紫外線照射による G1期 CRL4Cdt2の活性化におけるミスマッチ修復系の関与2017

    • Author(s)
      高原 教代、田中 美如、貫名 康平、林 晃世、酒井恒、菅澤 薫、塩見 泰史、西谷 秀男
    • Organizer
      2017年度生命科学系学会合同年次大会(ConBio2017)
    • Related Report
      2017 Annual Research Report
  • [Presentation] Cdt2-PCNA融合体は CRL4Cdt2の抑制制御を損なう2017

    • Author(s)
      荻野 寛行、植田 麻紗子、林 晃世、塩見 泰史、西谷 秀男
    • Organizer
      2017年度生命科学系学会合同年次大会(ConBio2017)
    • Related Report
      2017 Annual Research Report
  • [Presentation] ゲノム維持に関わる E3ユビキチンリガーゼ CRL4-Cdt2の基質認識サブユニット Cdt2のリン酸化による制御の解析2017

    • Author(s)
      貫名 康平、塩見 泰史、西谷 秀男
    • Organizer
      2017年度生命科学系学会合同年次大会(ConBio2017)
    • Related Report
      2017 Annual Research Report
  • [Presentation] ゲノム複製を制御するユビキチンリガーゼCRL4-Cdt2はPCNAと直接結合して機能する2017

    • Author(s)
      林 晃世、石井 健士、末永 尚弘、高原 教代、塩見 泰史、西谷 秀男
    • Organizer
      2017年度生命科学系学会合同年次大会(ConBio2017)
    • Related Report
      2017 Annual Research Report
  • [Presentation] RFC 複合体によるDNAへのPCNA着脱と連係した細胞内機能の解析2017

    • Author(s)
      塩見 泰史、織田 里美、佐藤 護、夏目 豊彰、鐘巻 将人、西谷 秀男
    • Organizer
      2017年度生命科学系学会合同年次大会(ConBio2017)
    • Related Report
      2017 Annual Research Report
  • [Presentation] ゲノム複製を制御するユビキチンリガーゼCRL4-Cdt2のPIPボックスの役割_試験管内解析2016

    • Author(s)
      林晃世、高原 教代、末永尚弘、石井健士、高橋達郎、塩見 泰史、西谷 秀男
    • Organizer
      第39回 日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県)
    • Year and Date
      2016-11-30
    • Related Report
      2016 Annual Research Report
  • [Presentation] ゲノム複製を制御するユビキチンリガーゼCRL4-Cdt2のピPボックスの役割_細胞での解析2016

    • Author(s)
      高原教代、末永尚弘、石井健士、林晃世、塩見泰史、西谷秀男
    • Organizer
      第39回 日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県)
    • Year and Date
      2016-11-30
    • Related Report
      2016 Annual Research Report
  • [Presentation] DDB2依存的なHBO1のリクルートはヌクレオチド除去修復に必須である2016

    • Author(s)
      丹伊田浩行、松沼亮一、堀口涼、内田千晴、酒井聡、大畑樹也、北川恭子、森脇真一、西谷秀男、宇井彩子、荻朋男、北川雅俊
    • Organizer
      第39回 日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県)
    • Year and Date
      2016-11-30
    • Related Report
      2016 Annual Research Report
  • [Presentation] E3ユビキチンリガーゼCRL4Cdt2の基質認識サブユニットCdt2のリン酸化による制御の解析2016

    • Author(s)
      貫名康平、塩見泰史、西谷秀男
    • Organizer
      第39回 日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県)
    • Year and Date
      2016-11-30
    • Related Report
      2016 Annual Research Report
  • [Presentation] Direct binding between PCNA and E3 ligase CRL4Cdt2 supports substrate targeting, and subsequent proteolysis during DNA replication.2016

    • Author(s)
      Akiyo Hayashi, Naohiro Suenaga, Michiyo Takahara, Takashi Ishii, Yasushi Shiomi, Hideo Nishitani
    • Organizer
      10th 3R International Synposium
    • Place of Presentation
      Matsue, Japan
    • Year and Date
      2016-11-13
    • Related Report
      2016 Annual Research Report
  • [Presentation] DNA複製時に機能するPCNA依存性ユビキチンリガーゼCRL4-Cdt2の細胞周期制御2015

    • Author(s)
      見谷 駿治、貫名 康平、森野 公之、塩見 泰史、西 谷 秀男
    • Organizer
      第38回 日本分子生物学会年会
    • Place of Presentation
      神戸ポートアイランド (兵庫県)
    • Year and Date
      2015-12-01
    • Related Report
      2015 Annual Research Report
  • [Presentation] PCNAアンローダー、Elg1-RFCの細胞内および生化的機能の解析2015

    • Author(s)
      塩見 泰史、西谷 秀男
    • Organizer
      第38回 日本分子生物学会年会
    • Place of Presentation
      神戸ポートアイランド (兵庫県)
    • Year and Date
      2015-12-01
    • Related Report
      2015 Annual Research Report
  • [Presentation] In vitro analysis of DNA-bound PCNA dependent ubiquitin ligase CRL4-Cdt22015

    • Author(s)
      Akiyo Hayashi, Yasushi Shiomi, Tatsuro S. Takahashi, Hideo Nishitani
    • Organizer
      Cold Spring Harbor Laboratory Meeting “Eukaryotic DNA replication and genome maintenance”
    • Place of Presentation
      Cold Spring Harbor Laboratory (New York, USA)
    • Year and Date
      2015-09-01
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] PCNAアンローダー、Elg1-RFCの機能解析2014

    • Author(s)
      塩見 泰史 西谷 秀男
    • Organizer
      第37回 日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜 (神奈川県)
    • Year and Date
      2014-11-25 – 2014-11-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] S期クロマチン特異的なタンパク質分解系CRL4-Cdt2の制御機構2014

    • Author(s)
      林 晃世、塩見 泰史 高橋 達郎 末永 尚弘 西谷 秀男
    • Organizer
      第37回 日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜 (神奈川県)
    • Year and Date
      2014-11-25 – 2014-11-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] DNA修復とエピゲノム制御に関わるチミンDNAグリコシラーゼの機能制御2014

    • Author(s)
      中村 知史、村上 浩一、上原 芳彦、小野 哲也、浦野 健、西谷 秀男、菅澤 薫
    • Organizer
      DNA修復とエピゲノム制御に関わるチミンDNAグリコシラーゼの機能制御
    • Place of Presentation
      パシフィコ横浜 (神奈川県)
    • Year and Date
      2014-11-25 – 2014-11-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] Mechanism of replication-coupled destruction of DNA replication licensing factor, Cdt1 by a CRL4-Cdt2 ubiquitin ligase2014

    • Author(s)
      Naohiro Suenaga, Takashi Ishii, Akiyo Hayashi, Yasushi Shiomi, Hideo Nishitani
    • Organizer
      2nd International Picobiology Institute Symposium “Development and Destruction
    • Place of Presentation
      Center for Advanced Science & Technology (Hyogo) Japan
    • Year and Date
      2014-10-09 – 2014-10-10
    • Related Report
      2014 Annual Research Report
  • [Remarks] 兵庫県立大学大学院生命理学研究科 生体情報学II分野 ホームページ

    • URL

      http://www.sci.u-hyogo.ac.jp/life/biosig/japanese/Top.html

    • Related Report
      2017 Annual Research Report
  • [Remarks] 兵庫県立大学大学院生命理学研究科 生体情報学II

    • URL

      http://www.sci.u-hyogo.ac.jp/life/biosig/japanese/Top.html

    • Related Report
      2016 Annual Research Report
  • [Remarks] 兵庫県立大学大学院生命理学研究科 生体情報学IIホームページ

    • URL

      http://www.sci.u-hyogo.ac.jp/life/biosig/japanese/Top.html

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report

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Published: 2014-04-04   Modified: 2019-03-29  

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