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Studies on the proton pump mechanism of the terminal oxidase by time resolved analyses at the hydrogen atom level resolution

Research Project

Project/Area Number 26291033
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Biophysics
Research InstitutionUniversity of Hyogo

Principal Investigator

Yoshikawa Shinya  兵庫県立大学, 生命理学研究科, 名誉教授 (40068119)

Co-Investigator(Renkei-kenkyūsha) ISHIMORI Koichiro  北海道大学, 大学院理学系研究院, 教授 (20192487)
TATENO Masaru  兵庫県立大学, 大学院生命理学研究科, 教授 (40291926)
SHINZAWA Kyoko (ITOH Kyoko)  兵庫県立大学, 大学院生命理学研究科, 准教授 (70206316)
KUBO Minoru  独立行政法人理化学研究所, 城生体金属科学研究室, 研究員 (90392878)
TAMADA Tarou  独立行政法人日本原子力研究開発機構, 量子ビーム応用研究部門, 研究主幹 (50391248)
MISAKI Tomonori  兵庫県立大学, 大学院物質理学研究科, 助教 (00411786)
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥16,640,000 (Direct Cost: ¥12,800,000、Indirect Cost: ¥3,840,000)
Fiscal Year 2016: ¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2015: ¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2014: ¥7,020,000 (Direct Cost: ¥5,400,000、Indirect Cost: ¥1,620,000)
Keywords呼吸鎖末端酸化酵素 / プロトンポンプ / 膜タンパク質 / ヘムタンパク質 / 時分割X線構造解析 / 時分割X線構造解析 / チトクロム酸化酵素 / ミトコンドリアエネルギー変換 / 振動分光解析 / 電子構造生物学
Outline of Final Research Achievements

Cytochrome c oxidase, which is one of the most important enzymes for preserving the Life, reduces molecular oxygen (O2) coupled with proton pumping which creates the proton gradient for driving ATP synthesis by FoF1 ATPase. By using the X-ray free electron laser facility, we have succeeded in (i) determination of the O2 reduction site and (ii) showing that the pumping proton back leak is blocked by O2 binding to a copper ion site included in the O2 reduction site. The O2 reduction site structure has been yet to be determined for the last 50 years. The latter accomplishment together with the former set a mile stone for elucidation of the mechanism of this enzyme at the hydrogen atom level resolution which is a dream of most of Life Scientist.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • Research Products

    (67 results)

All 2017 2016 2015 2014 Other

All Int'l Joint Research (1 results) Journal Article (14 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 13 results,  Open Access: 4 results,  Acknowledgement Compliant: 9 results) Presentation (50 results) (of which Int'l Joint Research: 5 results,  Invited: 6 results) Book (2 results)

  • [Int'l Joint Research] Oxford大学化学科(英国)

    • Related Report
      2016 Annual Research Report
  • [Journal Article] Complex structure of cytochrome c-cytochrome c oxidase reveals a novel protein-protein interaction mode2017

    • Author(s)
      Satoru Shimada, Kyoko Shinzawa‐Itoh, Junpei Baba, Shimpei Aoe, Atsuhiro Shimada, Eiki Yamashita, Jiyoung Kang, Masaru Tateno, Shinya Yoshikawa, and Tomitake Tsukihara
    • Journal Title

      EMBO J.

      Volume: 86 Issue: 3 Pages: 291-300

    • DOI

      10.15252/embj.201695021

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Osuda Y, Shinzawa-Itoh K, Tani K, Maeda S, Yoshikawa S, Tsukihara T, Gerle C.2016

    • Author(s)
      Osuda Y, Shinzawa-Itoh K, Tani K, Maeda S, Yoshikawa S, Tsukihara T, Gerle C.
    • Journal Title

      Microscopy

      Volume: 65 Issue: 3 Pages: 263-267

    • DOI

      10.1093/jmicro/dfv381

    • Related Report
      2016 Annual Research Report 2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Energetic Mechanism of Cytochrome c - Cytochrome c Oxidase Electron Transfer Complex Formation under Turnover Conditions Revealed by Mutational Effects and Docking Simulation2016

    • Author(s)
      W. Sato, S. Hitaoka, K. Inoue, M. Imai, T. Saio, T. Uchida, K. Shinzawa-Itoh, S. Yoshikawa, K. Yoshizawa, and K. Ishimori
    • Journal Title

      J. Biol. Chem.

      Volume: 291 Issue: 29 Pages: 15320-15331

    • DOI

      10.1074/jbc.m115.708065

    • NAID

      120006324913

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] The Mg2+-containing Water Cluster of Mammalian Cytochrome c Oxidase Collects Four Pumping Proton Equivalents in Each Catalytic Cycle2016

    • Author(s)
      Yano N, Muramoto K, Shimada A, Takemura S, Baba J, Fujisawa H, Mochizuki M, Shinzawa-Itoh K, Yamashita E, Tsukihara T, Yoshikawa S.
    • Journal Title

      J. Biol. Chem.

      Volume: 291 Issue: 46 Pages: 23882-23894

    • DOI

      10.1074/jbc.m115.711770

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Dimer interface of bovine cytochrome c oxidase is influenced by local posttranslational modifications and lipid binding2016

    • Author(s)
      Idlir Liko, Matteo Degiacomi, Shabaz Mohammed, Shinya Yoshikawa, Carla Schmidt and Carol V. Robinson,
    • Journal Title

      Proc. Natl. Acad. Sci. USA

      Volume: 113 Issue: 29 Pages: 8230-8235

    • DOI

      10.1073/pnas.1600354113

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] X-ray structure of cyanide-bound bovine heart cytochrome c oxidase in the fully oxidized state at 2.0 angstrom resolution.2015

    • Author(s)
      Yano N, Muramoto K, Mochizuki M, Shinzawa-Itoh K, Yamashita E, Yoshikawa S, Tsukihara
    • Journal Title

      Acta Cryst. F

      Volume: 71 Issue: 6 Pages: 726-730

    • DOI

      10.1107/s2053230x15007025

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Stepwise Binding of Two Azide Ions to the O2-reduction Site of Bovine Heart Cytochrome c Oxidase Shown by Resonance Raman Analyses2015

    • Author(s)
      M. Hikita, A. Yamamoto, K. Shinzawa-Itoh, T. Ogura, S. Yoshikawa
    • Journal Title

      Chem. Lett.

      Volume: 44 Issue: 8 Pages: 1142-1144

    • DOI

      10.1246/cl.150384

    • NAID

      130005092608

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Higdla is a oositive regulaator of cytochrome c oxidase2015

    • Author(s)
      T. Hayashi, Y. Asano, Y. Shintani, H. Aoyama, H. Kioka, O. Tsukamoto, M. Hikita, K. Shinzawa-Itoh, K. Takajuji, S. Higo, H. Kato, S. Yamazaki, K. Matsuoka, A. Nakano, H. Asanuma, M. Asakura, T. Minamino, Y. Goto, T. Ogura, M. Kitakaze, I. Komuro, Y. Sakata, T. Tsukihara, S. Yoshikawa, S. Takashima
    • Journal Title

      Proc. Nat. Acad. Sci. U.S.A.

      Volume: 112 Issue: 5 Pages: 1553-1558

    • DOI

      10.1073/pnas.1419767112

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Reaction mechanism of cytochrome c oxidase2015

    • Author(s)
      Yoshikawa, S., Shimada, A.
    • Journal Title

      Chem. Rev

      Volume: 112 Issue: 4 Pages: 1936-1989

    • DOI

      10.1021/cr500266a

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] 膜タンパク質機能解析のための結晶構造解析戦略2015

    • Author(s)
      吉川信也
    • Journal Title

      Dojin News

      Volume: 152 Pages: 7-15

    • Related Report
      2014 Annual Research Report
    • Acknowledgement Compliant
  • [Journal Article] フェムト秒レーザー結晶構造解析法を用いた無損傷休止型チトクロム酸化酵素の構造解析2015

    • Author(s)
      吉川信也
    • Journal Title

      Journal of the Japanese Society for Synchrotron Radiation Research

      Volume: 28 Pages: 56-66

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Determination of damage-free crystal structure of an X-ray sensitive protein using an XFEL2014

    • Author(s)
      Hirata K, Shinzawa-Itoh K, Yano N, Takemura S, Kato K, Hatanaka M, Muramoto K, Kawahara T, Tsukihara T, Yamashita E, Tono K, Ueno G, Hikima T, Murakami H, Inubushi Y, Yabashi M, Ishikawa T, Yamamoto M, Ogura T, Sugimoto H, Shen J-R, Yoshikawa S, Ago H
    • Journal Title

      Nature Methods

      Volume: 11 Issue: 7 Pages: 734-736

    • DOI

      10.1038/nmeth.2962

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Effects of proton motive force on the structure and dynamics of bovine cytochrome c oxidase in phospholipid visicles2014

    • Author(s)
      T. Nomura, S. Yanagisawa, K. Shinzawa-Itoh, S. Yoshikawa, and T. Ogura
    • Journal Title

      Biochemistry

      Volume: 53 Issue: 40 Pages: 6382-6391

    • DOI

      10.1021/bi501022j

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Improved X-ray structures of bovine heart cytochrome c oxidase reveal redox-driven proton active transports by Mg2+-containing water cluster2014

    • Author(s)
      Shinya Yoshikawa, Naomine Yano, Kyoko Shinzawa-Itoh, Kazumasa Muramoto, Eiki Yamashita, Tomitake Tsukihara
    • Journal Title

      Biochimica et Biophysica Acta (BBA), Bioenergetics

      Volume: 1837 Pages: e103-e104

    • DOI

      10.1016/j.bbabio.2014.05.186

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] Reaction mechanism of cytohrome c oxidase2017

    • Author(s)
      S. Yoshikawa
    • Organizer
      IGER International Symposium on Physics of Life
    • Place of Presentation
      ES hall, Nagoya Yuniversity (愛知県名古屋市)
    • Year and Date
      2017-03-25
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Processing of XFELstill images with a reference oscillation data set for crystal structural analyses of cytochrome c oxidase2016

    • Author(s)
      L. Fangjia, A. Shimada, K. Yamashita, K. Hirata, M. Yamamoto, K. Shinzawa-Itoh, S.Yoshikawa, T. Tsukihara
    • Organizer
      第54回日本生物物理学会年会
    • Place of Presentation
      つくば国際会議場(茨城県・つくば市)
    • Year and Date
      2016-11-25
    • Related Report
      2016 Annual Research Report
  • [Presentation] Elucidating the nmehanism of proton pumping in cytochrome c oxidase by time resolved IR spectroscopy2016

    • Author(s)
      C. Li, T. Nishiguchi, S. Yamauchi, K. Shinzawa-Itoh, S. Yoshikawa, S. Nakashima, T. Ogura
    • Organizer
      第54回日本生物物理学会年会
    • Place of Presentation
      つくば国際会議場(茨城県・つくば市)
    • Year and Date
      2016-11-25
    • Related Report
      2016 Annual Research Report
  • [Presentation] Detailed crystal structural studies of bovine cytochrome oxidase to elucidate the coupling of dioxygen reduction and proton pumping2016

    • Author(s)
      T. Tsukihara, A. Shimada, N. Yano, K. Muramoto, K. Shinzawa-Itoh, E. Yamshita, S. Yoshikawa
    • Organizer
      第54回日本生物物理学会年会
    • Place of Presentation
      つくば国際会議場(茨城県・つくば市)
    • Year and Date
      2016-11-25
    • Related Report
      2016 Annual Research Report
  • [Presentation] Complex structure of cytochrome c and cytochrome c oxidase shows a novel inter-protein interaction mode.2016

    • Author(s)
      Shimada S, Shinzawa-Itoh K, Baba J, Aoe S, Shimada A, Yamashita E, Kang J, Tateno M, Yoshikawa S, Tsukihara T
    • Organizer
      第54回日本生物物理学会年会
    • Place of Presentation
      つくば国際会議場(茨城県・つくば市)
    • Year and Date
      2016-11-25
    • Related Report
      2016 Annual Research Report
  • [Presentation] Interaction analysis of electron transfer complex formation between cytochrome c-cytochrome c oxidaseusing fluorescence anisotropy2016

    • Author(s)
      H. Kagaya, W. Sato, T. Uchida, K. Shinzawa Itoh, S. Yoshikawa, K. Ishimori
    • Organizer
      第54回日本生物物理学会年会
    • Place of Presentation
      つくば国際会議場(茨城県・つくば市)
    • Year and Date
      2016-11-25
    • Related Report
      2016 Annual Research Report
  • [Presentation] The effect of the hydrogen bond network on the oxygen reduction of cytochrome c oxidase2016

    • Author(s)
      Y. Aoyagi, T. Nishiguchi, K. Shinzawa-Itoh, S. Yoshikawa, S. Nakashima, T. Ogura
    • Organizer
      第54回日本生物物理学会年会
    • Place of Presentation
      つくば国際会議場(茨城県・つくば市)
    • Year and Date
      2016-11-25
    • Related Report
      2016 Annual Research Report
  • [Presentation] Coupling mechanism of cytochrome c oxidase studied by timeresolved resonance Raman spectroscopy2016

    • Author(s)
      S. Nakashima, Y. Nakagawa, K. Shinzawa-Itoh, S. Yoshikawa, T. Ogura
    • Organizer
      第54回日本生物物理学会年会
    • Place of Presentation
      つくば国際会議場(茨城県・つくば市)
    • Year and Date
      2016-11-25
    • Related Report
      2016 Annual Research Report
  • [Presentation] Functional significance of dehydration for formaton of electron transfer complex between cytochrome c and cytochrome c oxidase2016

    • Author(s)
      W. Sato, K. shinzawa-Itoh, T. Uchida, P. Brezezinski, S. Yoshikawa, K. Ishimori
    • Organizer
      第54回日本生物物理学会年会
    • Place of Presentation
      つくば国際会議場(茨城県・つくば市)
    • Year and Date
      2016-11-25
    • Related Report
      2016 Annual Research Report
  • [Presentation] High-resolution crystal structure of cytochrome c oxidase reveals the mechanism of highly efficient protonpumping2016

    • Author(s)
      A. Shimada, N. Yano, K. Muramoto, E. Yamashita, K. shinzawa-Itoh, T. Tsukihara, S. Yoshikawa,
    • Organizer
      第54回日本生物物理学会年会
    • Place of Presentation
      つくば国際会議場(茨城県・つくば市)
    • Year and Date
      2016-11-25
    • Related Report
      2016 Annual Research Report
  • [Presentation] The Mg2+-containing water cluster of mammalian cytochrome c oxidase collects four pumping proton equivalents in each catalytic cycle2016

    • Author(s)
      S. Yoshikawa
    • Organizer
      EBEC 2016, 19th European Bioenergetics Conference
    • Place of Presentation
      Riva del Garda (Italy)
    • Year and Date
      2016-07-02
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Processing of XFEL still images with a refference oscillation data set for crystal structural analyses of cytochrome coxidase2016

    • Author(s)
      L. Fangja, A. Shimada, K. Yamashita, K. Hirata, K. Shinzwa-Itoh, T. Tsukihara, S. Yoshikawa
    • Organizer
      日本蛋白質科学会第16回年会
    • Place of Presentation
      福岡国際会議場(福岡県・福岡市)
    • Year and Date
      2016-06-07
    • Related Report
      2016 Annual Research Report
  • [Presentation] Structure of complex of cytochrome c and cytochrome c oxidase shows the novel protein-protein interaction style2016

    • Author(s)
      Shimada S, Shinzawa-Itoh K, Baba J, Aoe S, Shimada A, Yamashita E, Kang J, Tateno M, Yoshikawa S, Tsukihara T
    • Organizer
      日本蛋白質科学会第16回年会
    • Place of Presentation
      福岡国際会議場(福岡県・福岡市)
    • Year and Date
      2016-06-07
    • Related Report
      2016 Annual Research Report
  • [Presentation] Time resolved crystallographic analysis of cytochrome c oxidase using X-ray free electron laser2016

    • Author(s)
      Keita Hatano, Atsuhiro Shimada, Akari Miyamoto, Seiki Baba, Keitaro Yamashita, Minoru Kubo, Hideo Ago, Kunio Hirata, Go Ueno, Hironori Murakami, Masaki Yamamoto, Takashi Kumasaka, Eiki Yamashita, Takashi Ogura, Kyoko Shinzawa-Itoh, Shinya Yoshikawa, Tomitake Tsukihara
    • Organizer
      日本蛋白質科学会第16回年会
    • Place of Presentation
      福岡国際会議場(福岡県・福岡市)
    • Year and Date
      2016-06-07
    • Related Report
      2016 Annual Research Report
  • [Presentation] Development of thawing method of frozen protein crystal for high resolution crystal structure analysis at room temperature2016

    • Author(s)
      Akari Miyamoto, Atsuhiro Shimada, Keita Hatano, Seiki Baba, Takashi Kumasaka, Kyoko Shinzawa-Itoh, Tomitake Tsukihara, Shinya Yoshikawa
    • Organizer
      日本蛋白質科学会第16回年会
    • Place of Presentation
      福岡国際会議場(福岡県・福岡市)
    • Year and Date
      2016-06-07
    • Related Report
      2016 Annual Research Report
  • [Presentation] X-ray crystal structure of F-intermediate of cytochrome c oxidase at 1.6 angstrom resolution2016

    • Author(s)
      Yuki Eto, Atsuhiri Shimada, Eiki Yamashita Kyoko Shinzawa-Itoh, Tomitake Tsukihara, Shinya Yoshikawa
    • Organizer
      日本蛋白質科学会第16回年会
    • Place of Presentation
      福岡国際会議場(福岡県・福岡市)
    • Year and Date
      2016-06-07
    • Related Report
      2016 Annual Research Report
  • [Presentation] Dynamics at the reaction site of cytochrome c oxidase studied by time-resolved resonance Raman spectroscopy2016

    • Author(s)
      S. Nakashima, Y. Nakagawa, K. Shinzwa-Itoh, S. Yoshikawa, T. Ogura
    • Organizer
      日本蛋白質科学会第16回年会
    • Place of Presentation
      福岡国際会議場(福岡県・福岡市)
    • Year and Date
      2016-06-07
    • Related Report
      2016 Annual Research Report
  • [Presentation] The proton pump mechanism suggested from the crystal structures of cytochrome c oxidase intermediates and their derivatives.2016

    • Author(s)
      A. Shimada, J. Baba, E. Yamashita, K. muramoto, K. Shinzawa-Itoh, T.Tsukihara, S. Yoshikawa
    • Organizer
      日本蛋白質科学会第16回年会
    • Place of Presentation
      福岡国際会議場(福岡県・福岡市)
    • Year and Date
      2016-06-07
    • Related Report
      2016 Annual Research Report
  • [Presentation] Time-resolved IR spectroscopic studies for proton pumping mechanisms of cytochrome c oxidase2016

    • Author(s)
      *C. Li, T. Nishiguchi, S. Yamauchi, K. Shinzawa-Itoh, S. Yoshikawa, S. Nakashima, T. Ogura
    • Organizer
      日本化学会第96回春季年会
    • Place of Presentation
      同志社大学京田辺キャンパス(京都府京田辺市)
    • Year and Date
      2016-03-24
    • Related Report
      2015 Annual Research Report
  • [Presentation] 時間分解共鳴ラマン分光法によるチトクロムc酸化酵素のCO光解離に伴う構造ダイナミクスの研究2016

    • Author(s)
      中川善之・伊藤-新澤 恭子・吉川信也・中島 聡・小倉尚志
    • Organizer
      日本化学会第96回春季年会
    • Place of Presentation
      同志社大学京田辺キャンパス(京都府京田辺市)
    • Year and Date
      2016-03-24
    • Related Report
      2015 Annual Research Report
  • [Presentation] チトクロムc酸化酵素のP中間体の紫外共鳴ラマン分光2016

    • Author(s)
      渡邉祥子・柳澤幸子・伊藤-新澤 恭子・吉川信也・小倉尚志
    • Organizer
      日本化学会第96回春季年会
    • Place of Presentation
      同志社大学京田辺キャンパス(京都府京田辺市)
    • Year and Date
      2016-03-24
    • Related Report
      2015 Annual Research Report
  • [Presentation] チトクローム酸化酵素の水素結合状態変化の酸素還元反応への影響2016

    • Author(s)
      青柳裕大・西口達人・伊藤-新澤 恭子・吉川信也・中島 聡・小倉尚志
    • Organizer
      日本化学会第96回春季年会
    • Place of Presentation
      同志社大学京田辺キャンパス(京都府京田辺市)
    • Year and Date
      2016-03-24
    • Related Report
      2015 Annual Research Report
  • [Presentation] 常温嫌気結晶試料の動的構造解析へ向けた自動サンプルチェンジャーSPACEの高度化2015

    • Author(s)
      上野剛、平田邦生、吾郷日出夫、村上博則、馬場清喜、島田敦広、熊坂崇、伊藤-新澤恭子、吉川信也、月原冨武、山本雅貴
    • Organizer
      常温嫌気結晶試料の動的構造解析へ向けた自動サンプルチェンジャーSPACEの高度化
    • Place of Presentation
      大阪府立大学 中百舌鳥キャンパス(大阪府堺市)
    • Year and Date
      2015-10-18
    • Related Report
      2015 Annual Research Report
  • [Presentation] Molecular Mechanisms of Cytochrome c Oxidase as Studied by Vibrational Spectroscopy2015

    • Author(s)
      T. Ogura, N. Satoru, K. Shinzawa-Itoh, S. Yoshikawa
    • Organizer
      5th Asian Spectroscopy Conference on Vibrational Spectroscopy
    • Place of Presentation
      Sydney, Australia
    • Year and Date
      2015-09-29
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] チトクロームc酸化酵素における酸素還元反応とプロトンポンプ共役機構2015

    • Author(s)
      中島 聡・西口達人・李 辰・伊藤-新澤 恭子・吉川信也・小倉尚志
    • Organizer
      第53回日本生物物理学会年会
    • Place of Presentation
      金沢大学角間キャンパス(石川県金沢市)
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] Development of high-resolution X-ray diffraction experiments at room temperature2015

    • Author(s)
      波多野 啓太、宮本 朱梨、島田 敦広、馬場 清喜、熊坂 崇、伊藤ー新澤 恭子、月原 冨武 、吉川 信也
    • Organizer
      第53回 日本生物物理学会年会
    • Place of Presentation
      金沢大学角間キャンパス(石川県金沢市)
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] Active supercomplex purified from bovine heart reveals the functional unit of the mitochondrial respiratory chain2015

    • Author(s)
      伊藤-新澤 恭子、下村 陽信、柳澤 幸子、島田 悟、高橋 涼子、上根 滋史、小倉 尚志、吉川 信也、月原 冨武
    • Organizer
      第15回日本蛋白質科学会年会
    • Place of Presentation
      金沢大学角間キャンパス(石川県金沢市)
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] The X-ray structural analysis of O intermediate of bovine heart cytochrome c oxidase.2015

    • Author(s)
      江藤 勇樹、島田 敦広、原 史剛、山下 栄樹、伊藤ー新澤 恭子、月原 冨武、吉川 信也
    • Organizer
      第15回日本蛋白質科学会年会
    • Place of Presentation
      金沢大学角間キャンパス(石川県金沢市)
    • Year and Date
      2015-09-13
    • Related Report
      2015 Annual Research Report
  • [Presentation] チトクロム酸化酵素 F 型中間体の高分解能 X 線結晶構造解析2015

    • Author(s)
      江藤 勇樹、島田 敦広、前田 友子、山下 栄樹、村本 和優、伊藤- 新澤 恭子、月原 冨武、吉川 信也
    • Organizer
      第15回日本蛋白質科学会年会
    • Place of Presentation
      あわぎんホール(徳島県徳島市)
    • Year and Date
      2015-06-24
    • Related Report
      2015 Annual Research Report
  • [Presentation] チトクロム酸化酵素内のMgを含む水クラスターが酸素取り込み前に4等量のプロトンを蓄積することで、高効率プロトンポンプ反応を可能にする2015

    • Author(s)
      島田 敦広、矢野 直峰、武村 秀平、村本 和優、山下 栄樹、伊藤-新澤 恭子、前田 友子、月原 冨武、吉川 信也
    • Organizer
      第15回日本蛋白質科学会年会
    • Place of Presentation
      あわぎんホール(徳島県徳島市)
    • Year and Date
      2015-06-24
    • Related Report
      2015 Annual Research Report
  • [Presentation] 中性領域(pH7.3) でのウシ心筋チトクロム酸化酵素の結晶化及び構造解明2015

    • Author(s)
      萩本 楓、伊藤- 新澤 恭子、島田 敦広、島田 悟、Luo Fangjia、山下 栄樹、吉川 信也、月原 冨武
    • Organizer
      第15回日本蛋白質科学会年会
    • Place of Presentation
      あわぎんホール(徳島県徳島市)
    • Year and Date
      2015-06-24
    • Related Report
      2015 Annual Research Report
  • [Presentation] 機能を保持したウシ心筋ミトコンドリア呼吸鎖超複合体の調製2015

    • Author(s)
      伊藤-新澤恭子・下村陽信・柳澤幸子・島田 悟・小倉尚志・月原富武
    • Organizer
      第15回日本蛋白質科学会年会
    • Place of Presentation
      あわぎんホール(徳島県徳島市)
    • Year and Date
      2015-06-24
    • Related Report
      2015 Annual Research Report
  • [Presentation] チトクロム酸化酵素の真のアジ化物イオン結合型構造により明らかになった、酸素還元中心の構造変化とプロトンポンプ経路の関係性2015

    • Author(s)
      波多野 啓太、島田 敦広、引田 理英、蓼原 瞳、山本 旭麻、山下 栄樹、前田 友子、伊藤- 新澤 恭子、月原 冨武、吉川 信也
    • Organizer
      第15回日本蛋白質科学会年会
    • Place of Presentation
      あわぎんホール(徳島県徳島市)
    • Year and Date
      2015-06-24
    • Related Report
      2015 Annual Research Report
  • [Presentation] シアン結合完全還元型チトクロム酸化酵素のX 線結晶構造解析から明らかになった、2015

    • Author(s)
      馬場 淳平、島田 敦広、山下 栄樹、村本 和優、伊藤- 新澤 恭子、月原 冨武、吉川 信也
    • Organizer
      第15回日本蛋白質科学会年会
    • Place of Presentation
      あわぎんホール(徳島県徳島市)
    • Year and Date
      2015-06-24
    • Related Report
      2015 Annual Research Report
  • [Presentation] チトクロムc とチトクロム酸化酵素共結晶の高分解能X 線結晶構造に基づく相互作用解明2015

    • Author(s)
      島田 悟、青江 新平、伊藤- 新澤 恭子、島田 敦広、馬場 淳平、武村 秀平、山下 栄樹、吉川 信也、月原 冨武
    • Organizer
      第15回日本蛋白質科学会年会
    • Place of Presentation
      あわぎんホール(徳島県徳島市)
    • Year and Date
      2015-06-24
    • Related Report
      2015 Annual Research Report
  • [Presentation] Newly Developed systems of time-resolved IR spectroscopy for elucidating the proton pumping reaction of cytochrome c oxidase2015

    • Author(s)
      C. Li, T. Nishiguchi, K. Shinzawa-Itoh, S. Yoshikawa, S. Nakashima, T. Ogura
    • Organizer
      第15回日本蛋白質科学会年会
    • Place of Presentation
      あわぎんホール(徳島県徳島市)
    • Year and Date
      2015-06-24
    • Related Report
      2015 Annual Research Report
  • [Presentation] Collection of 4 pumping-proton equivalents into Mg2+-containing water cluster of cytochrome c oxidase, revealed by X-ray analyses2015

    • Author(s)
      S. Yoshikawa, N. Yano, A. Shimada, K. Muramoto, S. Takemura, K. Shinzawa-Itoh, E. Yamashita, T. Tsukihara
    • Organizer
      Bioenergetics, Gordon Research Conferences
    • Place of Presentation
      Procter Academy Andover, NH (USA)
    • Year and Date
      2015-06-21
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] チトクロームc酸化酵素の酸素還元反応とプロトンポンプの共役機構2015

    • Author(s)
      中島 聡・西口達人・Chen Li・中川善之・青柳裕大・新澤-伊藤恭子・吉川信也・小倉尚志
    • Organizer
      第42回生体分子科学討論会
    • Place of Presentation
      高崎シティーギャラリーコアホール(群馬県高崎市)
    • Year and Date
      2015-06-12
    • Related Report
      2015 Annual Research Report
  • [Presentation] Effects of Proton Motive Force on the Structure and Dynamics of Cytochrome c Oxidase: Resonance Raman Spectroscopy2015

    • Author(s)
      *T. Ogura, T. Nomura, S. Yanagisawa, K. Shinzawa-Itoh, S. Yoshikawa
    • Organizer
      5th Georgian Bay International Conference on Bioinorganic Chemistry (CanBIC5)
    • Place of Presentation
      Parry Sound, Canada
    • Year and Date
      2015-05-19
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Proton pump mechanism of bovine heart cytochrome c oxidase2015

    • Author(s)
      吉川信也
    • Organizer
      日本生物物理学会北海道支部講演会
    • Place of Presentation
      北大理学部(北海道・札幌市)
    • Year and Date
      2015-03-04
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] チトクロムc とチトクロム酸化酵素複合体のX 線結晶構造解析2014

    • Author(s)
      Satoru Shimada, Kyoko Shinzawa-Itoh, Shimpei Aoe, Atsuhiro Shimada, Jumpei Baba, Syuhei Takemura, Eiki Yamashita, Tomitake Tsukihara, Shinya Yoshikawa
    • Organizer
      第52回日本生物物理学会
    • Place of Presentation
      札幌コンベンションセンター(北海道・札幌市)
    • Year and Date
      2014-09-27
    • Related Report
      2014 Annual Research Report
  • [Presentation] ミトコンドリア呼吸鎖のシトクロムc-シトクロムc 酸化酵素複合体における 電子伝達反応の構造制御機構2014

    • Author(s)
      Mizue Imai1, Wataru Sato, Kaoru Inoue, Koichi Sakamoto, Kyoko Shinzawa, Takeshi Uchida, Shinya Yoshikawa, Koichiro Ishimori
    • Organizer
      第52回日本生物物理学会
    • Place of Presentation
      札幌コンベンションセンター(北海道・札幌市)
    • Year and Date
      2014-09-26
    • Related Report
      2014 Annual Research Report
  • [Presentation] チトクローム酸化酵素の反応初期過程における共役機構の解明2014

    • Author(s)
      Satoru Nakashima, Minoru Kubo, Izumi Ishigami, Kyoko Itoh-Shinzawa, Shinya Yoshikawa, Takashi Ogura
    • Organizer
      第52回日本生物物理学会
    • Place of Presentation
      札幌コンベンションセンター(北海道・札幌市)
    • Year and Date
      2014-09-26
    • Related Report
      2014 Annual Research Report
  • [Presentation] チトクロムc 酸化酵素の酸素還元反応の時間分解赤外吸収測定を目的とした酸素肺フローシステムの開発2014

    • Author(s)
      Tatsuhito Nishiguchi, Masahide Hikita, Kyoko Shinzawa-Itoh, Shinya Yoshikawa, Satoru Nakashima, Takashi Ogura
    • Organizer
      第52回日本生物物理学会
    • Place of Presentation
      札幌コンベンションセンター(北海道・札幌市)
    • Year and Date
      2014-09-26
    • Related Report
      2014 Annual Research Report
  • [Presentation] アジ化物結合型チトクロム酸化酵素の高分解能 X 線結晶構造解析によるアジ化物結合様式の解析2014

    • Author(s)
      Atsuhiro Shimada, Masahide Hikita, Hitomi Tadehara, Akima Yamamoto, Eiki Yamashita, Kyoko Shinzawa-Itoh, Tomoko Maeda, Tomitake Tsukihara, Shinya Yoshikawa
    • Organizer
      第52回日本生物物理学会
    • Place of Presentation
      札幌コンベンションセンター(北海道・札幌市)
    • Year and Date
      2014-09-25
    • Related Report
      2014 Annual Research Report
  • [Presentation] 高度に組織化された鉄イオンの機能により駆動されるチトクロム酸化酵素反応機構2014

    • Author(s)
      吉川信也、
    • Organizer
      鉄バイオサイエンス学会第38回学術集会
    • Place of Presentation
      仙台国際センター(宮城県・仙台市)
    • Year and Date
      2014-09-06 – 2014-09-07
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Improved X-ray structures of bovine heart cytochrome c oxidase reveal redox-driven proton active transports by Mg2+-containing water cluster2014

    • Author(s)
      Shinya Yoshikawa, Naomine Yano, Kyoko Shinzawa-Itoh, Kazumasa Muramoto, Eiki Yamashita, Tomitake Tsukihara
    • Organizer
      European Bioenrgetics Conference (EBEC)2014
    • Place of Presentation
      Lisbon (Portugal)
    • Year and Date
      2014-07-12 – 2014-07-17
    • Related Report
      2014 Annual Research Report
  • [Presentation] CO結合型ウシ心筋チトクロムc酸化酵素に対する高分解能X線結晶構造解析法を用いた金属酸化還元中心によるプロトンポンプ制御機構の解明2014

    • Author(s)
      矢野直峰、武村秀平、前田友子、村本和優、山下栄樹、伊藤―新澤恭子、月原冨武、吉川信也
    • Organizer
      第14回日本蛋白質科学会年会
    • Place of Presentation
      ワークピア横浜/横浜産貿ホールマリネリア(神奈川県・横浜市)
    • Year and Date
      2014-06-26
    • Related Report
      2014 Annual Research Report
  • [Presentation] Highly stable tubes of bovine mitochondrial F-ATP synthase suitable for electron cryo tomography2014

    • Author(s)
      Chimari Jiko, Kyoko Shinzaw-Itoh, Shintaro Maeda, Karen Davies, Tomitake Tsukihara, Shinya Yoshikawa
    • Organizer
      第14回日本蛋白質科学会年会
    • Place of Presentation
      ワークピア横浜/横浜産貿ホールマリネリア(神奈川県・横浜市)
    • Year and Date
      2014-06-26
    • Related Report
      2014 Annual Research Report
  • [Presentation] CN-結合型およびCN-結合部分還元型チトクロムc酸化酵素の高分解能X線結晶構造解析2014

    • Author(s)
      川原貴子、長尾修平、島田敦広、矢野直峰、武村秀平、前田友子、村本和優、伊藤―新澤恭子、山下栄樹、月原冨武、吉川信也
    • Organizer
      第14回日本蛋白質科学会年会
    • Place of Presentation
      ワークピア横浜/横浜産貿ホールマリネリア(神奈川県・横浜市)
    • Year and Date
      2014-06-26
    • Related Report
      2014 Annual Research Report
  • [Book] “Respiratory Conservation of Energy with Dioxygen: Cytochrome c Oxidase” Metals Ions in Life Sciences Vol. 15, Sustaining Life on Planet Earth: Metalloenzymes Mastering Dioxygen and Other Chewy Gases2015

    • Author(s)
      Yoshikawa, S., Shimada, A., and Shinzawa-Itoh, K
    • Publisher
      Springer, Dordrecht
    • Related Report
      2014 Annual Research Report
  • [Book] “XFEL studies on bovine heart cytochrome c oxidase” ADVANCES IN PHOTOSYNTHESIS AND RESPIRATION Including Bioenergy and Related Processes2015

    • Author(s)
      Yoshikawa, S
    • Publisher
      Springer, Dordrecht
    • Related Report
      2014 Annual Research Report

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Published: 2014-04-04   Modified: 2018-03-22  

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