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Analysis of the diversity of carotenoid cleavage dioxygenase genes (CCD4s) in Chrysanthemum

Research Project

Project/Area Number 26292014
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Horticultural science
Research InstitutionThe University of Tokyo

Principal Investigator

SHIBATA Michio  東京大学, 農学生命科学研究科, 教授 (80355718)

Co-Investigator(Renkei-kenkyūsha) OHMIYA Akemi  独立行政法人農業・食品産業技術総合研究機構, 花き研究領域, 上席研究員 (50355715)
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥11,310,000 (Direct Cost: ¥8,700,000、Indirect Cost: ¥2,610,000)
Fiscal Year 2016: ¥2,600,000 (Direct Cost: ¥2,000,000、Indirect Cost: ¥600,000)
Fiscal Year 2015: ¥2,990,000 (Direct Cost: ¥2,300,000、Indirect Cost: ¥690,000)
Fiscal Year 2014: ¥5,720,000 (Direct Cost: ¥4,400,000、Indirect Cost: ¥1,320,000)
Keywords遺伝子 / カロテノイド / キク / バイオインフォマティクス / 園芸学 / 園芸ゲノム科学 / バイオインフォマティックス / 系統進化
Outline of Final Research Achievements

The diversity of carotenoid cleavage dioxygenase genes (CCD4s)
which operates specifically in ray florets of Chrysanthemum was analyzed. Although the CCD4 genes contain minor nucleotide sequence mutations, having high sequence similarlities of more than 90% in both Chrysanthemum cultivars and wild species, overall, they showed diversity. In Chrysanthemum cultivars at least 8 kinds of CCD4 homologs existed in their genome when classified by sequence similarity of 98% or more, 6 of which were expressed in ray florets. In the diploid Chrysanthemum wild species, Chrysanthemum makinoi, CCD4 homologs similar to CmCCD4a-5 of the cultivar‘Jimba’ were expressed. CCD4 gene fragments, which have been thought not to exist in the genomes of yellow flowered cultivars and wild species, have also been found.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • Research Products

    (5 results)

All 2016 2015 2014

All Presentation (5 results)

  • [Presentation] キク属二倍体野生種白色花弁で発現しているカロテノイド酸化開裂酵素遺伝子の多様性2016

    • Author(s)
      王 力超、樋口洋平、柴田道夫
    • Organizer
      園芸学会
    • Place of Presentation
      名城大学(愛知県名古屋市)
    • Year and Date
      2016-09-10
    • Related Report
      2016 Annual Research Report
  • [Presentation] キク品種の舌状花弁におけるカロテノイド酸化開裂酵素遺伝子の発現解析2016

    • Author(s)
      高橋麻美・樋口洋平・住友克彦・大宮あけみ・柴田道夫
    • Organizer
      園芸学会平成28年度春季大会
    • Place of Presentation
      東京農大厚木キャンパス(神奈川県・厚木市)
    • Year and Date
      2016-03-26
    • Related Report
      2015 Annual Research Report
  • [Presentation] キク属野生種におけるカロテノイド酸化開裂酵素遺伝子の多様性解析2016

    • Author(s)
      西崎哲也・樋口洋平・高橋麻美・草場信・谷口研至・住友克彦・大宮あけみ・柴田道夫
    • Organizer
      園芸学会平成28年度春季大会
    • Place of Presentation
      東京農大厚木キャンパス(神奈川県・厚木市)
    • Year and Date
      2016-03-26
    • Related Report
      2015 Annual Research Report
  • [Presentation] キク品種のカロテノイド酸化開裂酵素遺伝子の多様性解析2015

    • Author(s)
      高橋麻美・樋口洋平・住友克彦・大宮あけみ・柴田道夫
    • Organizer
      園芸学会平成27年度秋季大会
    • Place of Presentation
      徳島大学常三島キャンパス(徳島県・徳島市)
    • Year and Date
      2015-09-26
    • Related Report
      2015 Annual Research Report
  • [Presentation] キク属植物におけるカロテノイド酸化開裂酵素遺伝子(CCD4a)の多様性2014

    • Author(s)
      柴田道夫・大久保裕史・草場信・谷口研至・住友克彦・大宮あけみ
    • Organizer
      園芸学会
    • Place of Presentation
      佐賀大学
    • Year and Date
      2014-09-27 – 2014-09-29
    • Related Report
      2014 Annual Research Report

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Published: 2014-04-04   Modified: 2018-03-22  

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