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Site-specific modification of respiratory complex I for single molecule analysis

Research Project

Project/Area Number 26292060
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field Bioorganic chemistry
Research InstitutionKyoto University

Principal Investigator

Miyoshi Hideto  京都大学, (連合)農学研究科(研究院), 教授 (20190829)

Co-Investigator(Renkei-kenkyūsha) MURAI Masatoshi  京都大学, 大学院農学研究科, 助教 (80543925)
FURUIKE Shou  大阪医科大学, 医学部, 講師 (60392875)
FUJIWARA Takahiro  京都大学, 物質細胞統合システム拠点, 講師 (80423060)
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥16,380,000 (Direct Cost: ¥12,600,000、Indirect Cost: ¥3,780,000)
Fiscal Year 2016: ¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2015: ¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2014: ¥6,110,000 (Direct Cost: ¥4,700,000、Indirect Cost: ¥1,410,000)
Keywords生物制御化学 / 呼吸鎖複合体-I / 化学修飾 / ユビキノン / ミトコンドリア呼吸鎖 / トシル化学 / 複合体-I / ミトコンドリア / 呼吸鎖 / 呼吸鎖酵素
Outline of Final Research Achievements

The so-called “Piston Movement Model” has been proposed in 2013, which assumes that the membrane domain of respiratory complex I (NADH-quinone oxidoreductase) undergoes large structural changes to pump protons across membrane. To verify this model by single-molecule analyses using functional molecular probes that can detect rotation or flick, we aimed to establish the methodology that enables the specific chemical modify of the enzyme. I succeeded in the specific modification (azidation) of Asp160 in 49 kDa subunit (Asp160-(CH2)3-N3), which is located in the quinone binding pocket of complex I, via ligand-directed tosyl(LDT)chemistry. I demonstrated that this azido group is able to serve as a “footing” for subsequent diverse chemical modifications via the so-called click chemistry.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • Research Products

    (12 results)

All 2017 2016 2015 2014 Other

All Journal Article (6 results) (of which Peer Reviewed: 6 results,  Acknowledgement Compliant: 4 results) Presentation (5 results) Remarks (1 results)

  • [Journal Article] Specific methylation of Asp160 (49 kDa subunit) located inside the quinone binding cavity of bovine mitochondrial complex I2016

    • Author(s)
      Murai, M., Inaoka, H., Masuya, T., Aburaya, S., Aoki, W., and Miyoshi, H.
    • Journal Title

      Biochemistry

      Volume: 55 Issue: 23 Pages: 3189-3197

    • DOI

      10.1021/acs.biochem.6b00190

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Characterization of the reaction of decoupling ubiquinone with bovine mitochondrial respiratory complex I2016

    • Author(s)
      Masuya, T., Okuda, K., Murai, M. and Miyoshi, H.
    • Journal Title

      Bioscience, Biotechnology, and Biochemistry

      Volume: 80 Issue: 8 Pages: 1463-1469

    • DOI

      10.1080/09168451.2016.1179095

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Reduction of synthetic ubiquinone QT catalyzed by bovine mitochondrial complex I is decoupled with proton translocation2016

    • Author(s)
      Okuda, K., Murai, M., Aburaya, S., Aoki, W. and Miyoshi, H.
    • Journal Title

      Biochemistry

      Volume: 55 Issue: 3 Pages: 470-481

    • DOI

      10.1021/acs.biochem.5b01090

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Identification of the binding position of amilorides in the quinone binding pocket of mitochondrial complex I2015

    • Author(s)
      Ito, T. Murai, M., Morisaka, H., and Miyoshi, H.
    • Journal Title

      Biochemistry

      Volume: 54 Issue: 23 Pages: 3677-3686

    • DOI

      10.1021/acs.biochem.5b00385

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Site-specific chemical labeling of mitochonodrial respiratory complex I through ligand-directed tosylate chemistry2014

    • Author(s)
      Takahiro Masutani, Masatoshi Murai, Kentaro Ifuku, Hironobu Morisaka, Hideto Miyoshi
    • Journal Title

      Biochemistry

      Volume: 53 Issue: 14 Pages: 2307-2317

    • DOI

      10.1021/bi500205x

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Pinpoint chemical modification of Asp160 in the 49 kDa subunit of bovine mitochondrial complex I via a combination of ligand-directed tosyl chemistry and click chemistry2014

    • Author(s)
      Masuya, T., Murai, M., Morisaka, H. and Miyoshi, H.
    • Journal Title

      Biochemistry

      Volume: 53 Issue: 49 Pages: 7816-7823

    • DOI

      10.1021/bi501342w

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] ミトコンドリア呼吸鎖複合体-Iの位置特異的化学修飾2017

    • Author(s)
      桝谷貴弘、村井正俊、三芳秀人
    • Organizer
      日本農芸化学会
    • Place of Presentation
      京都女子大
    • Year and Date
      2017-03-18
    • Related Report
      2016 Annual Research Report
  • [Presentation] ミトコンドリア複合体-Iによる合成ユビキノンQTの還元2016

    • Author(s)
      桝谷貴洋、奥田健司、村井正俊、三芳秀人
    • Organizer
      日本農薬学会第41回大会
    • Place of Presentation
      島根大学
    • Year and Date
      2016-03-17
    • Related Report
      2015 Annual Research Report
  • [Presentation] ミトコンドリア複合体-I阻害剤としてのアミロライド類の作用機構研究2016

    • Author(s)
      伊藤剛、村井正俊、村上園美、森坂裕信、三芳秀人
    • Organizer
      日本農薬学会第41回大会
    • Place of Presentation
      島根大学
    • Year and Date
      2016-03-17
    • Related Report
      2015 Annual Research Report
  • [Presentation] ミトコンドリア複合体-Iのピンポイント化学就職2015

    • Author(s)
      桝谷貴洋、村井正俊、森坂裕信、三芳秀人
    • Organizer
      日本農芸化学会2015年度大会
    • Place of Presentation
      岡山大学・津島キャンパス
    • Year and Date
      2015-03-27 – 2015-03-29
    • Related Report
      2014 Annual Research Report
  • [Presentation] ミトコンドリア複合体-Iのピンポイント化学就職2014

    • Author(s)
      桝谷貴洋、村井正俊、三芳秀人
    • Organizer
      日本生体エネルギー研究会
    • Place of Presentation
      愛媛大学・南加記念ホール
    • Year and Date
      2014-12-11 – 2014-12-13
    • Related Report
      2014 Annual Research Report
  • [Remarks] 生物機能制御化学研究室ホームページ

    • URL

      http://www.biofunc-chem.kais.kyoto-u.ac.jp/

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report

URL: 

Published: 2014-04-04   Modified: 2018-03-22  

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