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Structural study on the role of post-translational lipid modifications of the small G protein Ras

Research Project

Project/Area Number 26293065
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section一般
Research Field General medical chemistry
Research InstitutionKobe University

Principal Investigator

KATAOKA TOHRU  神戸大学, 大学院医学研究科, 教授 (40144472)

Co-Investigator(Kenkyū-buntansha) 島 扶美  神戸大学, 医学(系)研究科(研究院), 教授 (60335445)
枝松 裕紀  神戸大学, 医学(系)研究科(研究院), 助教 (70335438)
松本 篤幸  神戸大学, 医学(系)研究科(研究院), 助教 (00753906)
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥16,250,000 (Direct Cost: ¥12,500,000、Indirect Cost: ¥3,750,000)
Fiscal Year 2016: ¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2015: ¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2014: ¥7,150,000 (Direct Cost: ¥5,500,000、Indirect Cost: ¥1,650,000)
Keywordsシグナル伝達 / 蛋白質 / 癌 / 脂質 / 高分子構造・物性
Outline of Final Research Achievements

We succeeded in large scale preparation and purification of the post-translationally lipid-modified form of H-Ras protein and various intermediates of the modification by utilizing the protein-ligation reaction catalyzed by Sortase A. Structural analyses of the GTP-bound form of post-translationally-modified H-Ras using nuclear magnetic resonance spectroscopy and X-ray crystallography revealed that the modified C terminus established an intramolecular interaction with the N-terminal catalytic domain of H-Ras and positioned the post-translationally-attached farnesyl moiety at the proximity of the activator region, thereby forming a new binding interface for a Ras effector protein, c-Raf-1.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • Research Products

    (19 results)

All 2016 2015 2014

All Journal Article (7 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 7 results,  Open Access: 4 results,  Acknowledgement Compliant: 2 results) Presentation (11 results) (of which Int'l Joint Research: 4 results,  Invited: 10 results) Book (1 results)

  • [Journal Article] Phospholipase Cε activates nuclear factor-κB signaling by causing cytoplasmic localization of ribosomal S6 kinase and facilitating its phosphorylation of inhibitor κB in colon epithelial cells.2016

    • Author(s)
      Masahiro Wakita, Hironori Edamatsu, Mingzhen Li, Aki Emi, Sohei Kitazawa, Tohru Kataoka
    • Journal Title

      The Journal of Biological Chemistry

      Volume: 291巻 Issue: 24 Pages: 12586-12600

    • DOI

      10.1074/jbc.m116.717561

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Molecular Mechanism for Conformational Dynamics of Ras·GTP Elucidated from In-Situ Structural Transition in Crystal.2016

    • Author(s)
      Matsumoto S, Miyano N, Baba S, Liao J, Kawamura T, Tsuda C, Takeda A, Yamamoto M, Kumasaka T, Kataoka T, Shima F.
    • Journal Title

      Sci Rep.

      Volume: - Issue: 1

    • DOI

      10.1038/srep25931

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Crucial Role of Rapgef2 and Rapgef6, a Family of Guanine Nucleotide Exchange Factors for Rap1 Small GTPase, in Formation of Apical Surface Adherens Junctions and Neural Progenitor Development in the Mouse Cerebral Cortex.2016

    • Author(s)
      Kazuhiro Maeta, Hironori Edamatsu, Kaori Nishihara, Junji Ikutomo, Shymaa E. Bilasy, Tohru Kataoka
    • Journal Title

      eNeuro

      Volume: 3巻 Issue: 3 Pages: ENEURO.0142-16.2016

    • DOI

      10.1523/eneuro.0142-16.2016

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Deletion of Rapgef6, a candidate schizophrenia susceptibility gene, disrupts amygdala function in mice.2015

    • Author(s)
      R. J. Levy, M. Kvajo, Y. Li, E. Tsvetkov, W. Dong, Yoko Yoshikawa, Tohru Kataoka, V. Y. Bolshakov, M. Karayiorgou, J. A. Gogos
    • Journal Title

      Translational Psychiatry

      Volume: 5 Issue: 6 Pages: e577-e577

    • DOI

      10.1038/tp.2015.75

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Current status of the development of Ras inhibitors.2015

    • Author(s)
      Fumi Shima, Shigeyuki Matsumoto, Yoko Yoshikawa, Takashi Kawamura, Masayuki Isa, Tohru Kataoka
    • Journal Title

      Journal of Biochemistry

      Volume: 158 Issue: 2 Pages: 91-99

    • DOI

      10.1093/jb/mvv060

    • NAID

      40020554051

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] rasがん遺伝子産物Rasを分子標的としたがん治療薬開発の現状2015

    • Author(s)
      島扶美、吉川陽子、松本篤幸、片岡徹
    • Journal Title

      がん分子標的治療

      Volume: 13巻 Pages: 92-98

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Phospholipase Cε, an effector of Ras and Rap small GTPases, is required for airway inflammatory response in a mouse model of bronchial asthma.2014

    • Author(s)
      Tatsuya Nagano, Hironori Edamatsu, Kazuyuki Kobayashi, Nobuyuki Takenaka, Masatsugu Yamamoto, Naoto Sasaki, Yoshihiro Nishimura, Tohru Kataoka
    • Journal Title

      PLOS ONE

      Volume: 9巻 Issue: 9 Pages: e108373-e108373

    • DOI

      10.1371/journal.pone.0108373

    • NAID

      120005603833

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] Sortase Aを利用した翻訳後脂質修飾型Rasの産生と構造物学研究2016

    • Author(s)
      村嶋 陽亮、柯 浩亮、松本 篤幸、枝松 裕紀、片岡 徹
    • Organizer
      第14回次世代を担う若手のためのフィジカル・ファーマフォーラム(日本薬学会物理系薬学部会)
    • Place of Presentation
      ロッジ舞洲(大阪府・大阪市)
    • Year and Date
      2016-08-27
    • Related Report
      2016 Annual Research Report
  • [Presentation] rasがん遺伝子産物を分子標的としたがん治療薬のインシリコ創薬2016

    • Author(s)
      片岡徹
    • Organizer
      第14回次世代を担う若手のためのフィジカル・ファーマフォーラム(日本薬学会物理系薬学部会)
    • Place of Presentation
      ロッジ舞洲(大阪府・大阪市)
    • Year and Date
      2016-08-27
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Structure-based drug design of small-molecule Ras inhibitors having anti-tumor activity2016

    • Author(s)
      Tohru Kataoka
    • Organizer
      第14回日本臨床腫瘍学会学術集会
    • Place of Presentation
      神戸国際展示場・神戸国際会議場(兵庫県・神戸市)
    • Year and Date
      2016-07-29
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Development of anti-cancer drugs targeting the Ras signaling pathway2016

    • Author(s)
      Tohru Kataoka
    • Organizer
      Trans-Pacific Netwark for Drug Discovery and Identification of New Therapeutic Targets Kick-off Symposium
    • Place of Presentation
      Kobe University Graduate School of Medicine Kobe (Hyogo)
    • Year and Date
      2016-03-22
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Development of anti-cancer drugs targeting the Ras signaling pathway2015

    • Author(s)
      Tohru Kataoka
    • Organizer
      2015 Kobe University-Taipei Medical University Joint Symposium
    • Place of Presentation
      Taipei Medical College Taipei (Taiwan)
    • Year and Date
      2015-12-22
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] rasがん遺伝子産物を分子標的とした抗がん剤のインシリコ創薬2015

    • Author(s)
      片岡徹
    • Organizer
      情報計算化学生物学会 (CBI学会) シンポジウム「アカデミア創薬」
    • Place of Presentation
      タワーホール船堀(東京都江戸川区)
    • Year and Date
      2015-10-28
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] New strategies for development of anti-cancer drugs targeting the Ras pathway2015

    • Author(s)
      Tohru Kataoka
    • Organizer
      Joint Symposium of Universite de Liege and Kobe University “Recent cancer research from bases to clinical site”
    • Place of Presentation
      Kobe University Graduate School of Medicine Kobe (Hyogo)
    • Year and Date
      2015-05-13
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Structure-based drug design of anti-cancer compounds targeting Ras oncoproteins.2015

    • Author(s)
      Tohru Kataoka
    • Organizer
      Workshop on Innovation and Pioneering Technology (WINTech) 2015 “Innovation by Synergy of Computational & Synchrotron Radiation Sciences”
    • Place of Presentation
      神戸大学統合研究拠点コンベンションホール(兵庫県神戸市)
    • Year and Date
      2015-03-12
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] Universal roles of phospholipase Cε in carcinogenesis and inflammation.2015

    • Author(s)
      Tohru Kataoka
    • Organizer
      5th International Symposium on Carcinogenic Spiral “Infection, Immunity, and Cancer”
    • Place of Presentation
      神戸ポートピアホテル(兵庫県神戸市)
    • Year and Date
      2015-02-26 – 2015-02-27
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] 分子標的がん治療薬の開発とSPring-82014

    • Author(s)
      片岡徹
    • Organizer
      SPring-8/SACLAコンファレンス2014「進化する光が拓く科学技術」
    • Place of Presentation
      JPタワーホール&カンファレンス(東京都千代田区)
    • Year and Date
      2014-12-01
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Presentation] アカデミア発、rasがん遺伝子産物を分子標的にした抗がん剤の開発2014

    • Author(s)
      片岡徹
    • Organizer
      CBI学会第349回研究講演会「日本版NIHの現状とオープンイノベーションの成果」
    • Place of Presentation
      グランフロント大阪(大阪府大阪市)
    • Year and Date
      2014-04-11
    • Related Report
      2014 Annual Research Report
    • Invited
  • [Book] SPring-8 Research Frontiers 20132014

    • Author(s)
      Fumi Shima, Tohru Kataoka
    • Total Pages
      154
    • Publisher
      SPring-8/JASRI
    • Related Report
      2014 Annual Research Report

URL: 

Published: 2014-04-04   Modified: 2018-03-22  

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