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Analyses of origin of circumpolar arctic alpine plants ranging across Pacific rim and hypothesis testing of Beringea-refugia

Research Project

Project/Area Number 26304013
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypePartial Multi-year Fund
Section海外学術
Research Field Biodiversity/Systematics
Research InstitutionKyoto University

Principal Investigator

SETOGCUHI Hiroaki  京都大学, 人間・環境学研究科(研究院), 教授 (70206647)

Co-Investigator(Kenkyū-buntansha) 池田 啓  岡山大学, 資源植物科学研究所, 助教 (70580405)
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥13,780,000 (Direct Cost: ¥10,600,000、Indirect Cost: ¥3,180,000)
Fiscal Year 2016: ¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2015: ¥4,550,000 (Direct Cost: ¥3,500,000、Indirect Cost: ¥1,050,000)
Fiscal Year 2014: ¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Keywords周極要素植物 / 高山植物 / ベーリンジア / 植物系統地理 / 第四紀 / レフュジア / 気候変動 / 周極高山植物 / 系統地理 / 環太平洋 / レフュージア / 光環境 / 種内多型
Outline of Final Research Achievements

Overseas surveys were conducted in areas centered on the Kenai peninsula in southern Alaska and inland in the Denali National Park. We gathered plants at 4 sites and collected samples used for DNA analysis from alpine plants (35 species in total) distributed commonly in Japanese archipelago such as Minnesota and Ezo Azalea (total of 419 samples). In addition to overseas surveys, DNA was extracted from samples collected in previous surveys and surveys this year and genetic diversity in nuclear genes was analyzed. This year, we found three genetic groups from Chubu region of the Japanese archipelago, middle part of Hokkaido and eastern part of Hokkaido to Alaska with emphasis on Phyllodoce aleutica. This result was orally presented at the Annual Meetings of Japanses Society for Plant Taxonomists on March 2017 at Kyoto Univeristy.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • Research Products

    (26 results)

All 2017 2016 2015 2014 Other

All Int'l Joint Research (2 results) Journal Article (14 results) (of which Int'l Joint Research: 6 results,  Peer Reviewed: 13 results,  Open Access: 14 results,  Acknowledgement Compliant: 9 results) Presentation (8 results) Book (1 results) Remarks (1 results)

  • [Int'l Joint Research] オスロ大学(ノルウェー)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] ロシア科学アカデミー極東研究所(ロシア連邦)

    • Related Report
      2016 Annual Research Report
  • [Journal Article] Phylogeographic insight into the Aleutian flora inferred from the historical range shifts of the alpine shrub Therorhodion camtshaticum (Pall.) Small (Ericaceae).2017

    • Author(s)
      Hata, D., Higashi, H., Ikeda, H., Yakubov, V., Barkalov, V., Setoguchi, H.
    • Journal Title

      Journal of Biogeography

      Volume: 44 Issue: 2 Pages: 283-293

    • DOI

      10.1111/jbi.12876

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Tight species cohesion among insular wild gingers (Asarum spp. Aristrochiaceae) on continental islands: highly differentiated floral characteristics versus undifferentiated genotypes.2017

    • Author(s)
      Matsuda, J., Maeda, Y., Nagasawa, J., Setoguchi, H.
    • Journal Title

      PLOS ONE

      Volume: 12(3) Issue: 3 Pages: e0173489-e0173489

    • DOI

      10.1371/journal.pone.0173489

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Development and characterization of EST-SSR markers in Asarum sakawanum var. stellatum and cross-amplification in related species2017

    • Author(s)
      Takahashi, D., Sakaguchi, S., Setoguchi, H.
    • Journal Title

      Plant Species Biology

      Volume: 印刷中 Issue: 3 Pages: 256-260

    • DOI

      10.1111/1442-1984.12156

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Genetic structure of Hepatica nobilis var. japonica, focusing on within population flower color polymorphism2016

    • Author(s)
      Shinichiro Kameoka, Hitoshi Sakio, Harue Abe, Hajime Ikeda, Hiroaki Setoguchi
    • Journal Title

      Journal of Plant Research

      Volume: 130 Issue: 2 Pages: 263-271

    • DOI

      10.1007/s10265-016-0893-1

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Lineage isolation in the face of active gene flow in the coastal plant wild radish is reinforced by differentiated vernalisation responses2016

    • Author(s)
      Han, Q., Higashi, H., Mitsui, Y., Setoguchi, H.
    • Journal Title

      BMC Evolutionary Biology

      Volume: in press Issue: 1 Pages: 84-84

    • DOI

      10.1186/s12862-016-0655-7

    • NAID

      120005947144

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Importance of demographic history for phylogeographic inference on the arctic – alpine plant Phyllodoce caerulea in East Asia2015

    • Author(s)
      Ikeda, H., Sakaguchi, S., Yakubov, V., Barkalov, V., Setoguchi, H.
    • Journal Title

      Heredity

      Volume: 116 Issue: 2 Pages: 232-238

    • DOI

      10.1038/hdy.2015.95

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Development of polymorphic microsatellite loci in the perennial herb Hepatica nobilis var. japonica (Ranunculaceae)2015

    • Author(s)
      Kameoka, S., Higashi, H., Setoguchi, H.
    • Journal Title

      Applications in Plant Sciences

      Volume: 3 Issue: 3 Pages: 1400114-1400114

    • DOI

      10.3732/apps.1400114

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Persistent history of the bird-despersed arctic-alpine plant Vaccinium vitis-idaea (Ericaceae) in Japan.2015

    • Author(s)
      Ikeda, H., Yoneta, Y., Higashi, H., Eidesen, P.B., Barkalov, V., Yakubov, V., Brochmann, C., Setoguchi, H.
    • Journal Title

      Journal of Plant Research

      Volume: 128 Issue: 3 Pages: 437-444

    • DOI

      10.1007/s10265-015-0709-8

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Molecular phylogeny of Shortia sensu lato (Diapensiaceae) based on multiple nuclear sequences.2015

    • Author(s)
      Hiroyuki HIGASHI, Hajime IKEDA, Hiroaki SETOGUCHI
    • Journal Title

      Plant Systematics and Evolution

      Volume: 301 Issue: 2 Pages: 523-529

    • DOI

      10.1007/s00606-014-1088-7

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Altitudinal variation of flavonoid contents in the leaves of Fallopia japonica and the needles of Larix kaempferi.2015

    • Author(s)
      Murai, S., Setoguchi, H., Kitajima, J., Iwashina, T.
    • Journal Title

      Natural Product Communications

      Volume: 10 Pages: 407-411

    • Related Report
      2014 Annual Research Report
    • Open Access / Acknowledgement Compliant
  • [Journal Article] Phylogeographical study of the alpine plant Cassiope lycopodioides (Ericaceae) suggests a range connection between the Japanese archipelago and Beringia during the Pleistocene.2014

    • Author(s)
      Ikeda, H., Higashi, H., Yakubov, V., Barkalov, V., Setoguchi, H.
    • Journal Title

      Biological Journal of the Linnean Society

      Volume: 113 Issue: 2 Pages: 497-509

    • DOI

      10.1111/bij.12342

    • Related Report
      2015 Annual Research Report 2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Molecular evidence of ancient relicts of arctic-alpine plants in East Asia.2014

    • Author(s)
      Ikeda, H., Barkalov, V., Yakubov, V.V., Setoguchi, H.
    • Journal Title

      New Phytologist

      Volume: 203 Issue: 3 Pages: 980-988

    • DOI

      10.1111/nph.12863

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Reclassification of Schizocodon soldanelloides var. minimus (Diapensiaceae).2014

    • Author(s)
      Higashi, H., Setoguchi, H.
    • Journal Title

      Acta Phytotaxonomica et Geobotanica

      Volume: 65 Pages: 147-151

    • NAID

      110009922439

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Polymorphisms of E1 and GIGANTEA in wild populations of Lotus japonicus.2014

    • Author(s)
      Wakabayashi, T., Oh, H., Kawaguchi, M., Harada, K., Sato, S., Ikeda, H., and Setoguchi, H.
    • Journal Title

      J. Plant Res.

      Volume: 127 Issue: 6 Pages: 651-660

    • DOI

      10.1007/s10265-014-0649-8

    • NAID

      40020256304

    • Related Report
      2014 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] 高山植物アオノツガザクラ(Phyllodoce aleutica)の系統地理:日本列島に起源した可能性のある分布形成の歴史2017

    • Author(s)
      池田 啓,Valentin YAKUBOV,Vyacheslav BARKALOV,瀬戸口 浩彰
    • Organizer
      日本植物分類学会第16大会
    • Place of Presentation
      京都大学
    • Year and Date
      2017-03-09
    • Related Report
      2016 Annual Research Report
  • [Presentation] 核遺伝子の塩基配列に基づく周北極―高山植物の系統地理2016

    • Author(s)
      池田啓,Pernille Bronken Eidesen, Viachenslav Barkalov, Valentin Yakubov, Christian Brockmann,瀬戸口浩彰
    • Organizer
      日本植物分類学会第15大会
    • Place of Presentation
      富山大学
    • Year and Date
      2016-03-06
    • Related Report
      2015 Annual Research Report
  • [Presentation] ミヤマタネツケバナCardamine nipponicaの系統解析とPHYEの分子進化2015

    • Author(s)
      池田啓,Lovisa Gustafson, Christian Brochmann,瀬戸口浩彰
    • Organizer
      日本植物学会第79大会
    • Place of Presentation
      新潟市朱鷺メッセコンベンションセンター
    • Year and Date
      2015-09-05
    • Related Report
      2015 Annual Research Report
  • [Presentation] Contrasting phylogeographic patterns and demographic history between mainland and Ryukyu Islands populations of wild radish.2015

    • Author(s)
      Qingxiang Han, Yuki Mitsui, Hiroyuki Higashi, Hiroaki Setoguchi
    • Organizer
      日本植物分類学会第14大会
    • Place of Presentation
      福島大学
    • Year and Date
      2015-03-05 – 2015-03-08
    • Related Report
      2014 Annual Research Report
  • [Presentation] カンアオイ属の分子系統:亜属間の系統関係とSect. Heterotropaの系統地理.2015

    • Author(s)
      高橋大樹,寺峰孜,瀬戸口浩彰
    • Organizer
      日本植物分類学会第14大会
    • Place of Presentation
      福島大学
    • Year and Date
      2015-03-05 – 2015-03-08
    • Related Report
      2014 Annual Research Report
  • [Presentation] 周北極-高山植物エゾノツガザクラPhyllodoce caeruuleaの系統地理.2014

    • Author(s)
      池田啓,阪口翔太,Valentin Yakubov,Viachenslav Barkalov,瀬戸口浩彰
    • Organizer
      日本植物学会第78大会
    • Place of Presentation
      明治大学(生田)
    • Year and Date
      2014-09-11 – 2014-09-14
    • Related Report
      2014 Annual Research Report
  • [Presentation] カンアオイ属の分子系統:亜属間の系統関係とSect. Heterotropaの系統地理.2014

    • Author(s)
      高橋大樹,瀬戸口浩彰
    • Organizer
      日本植物学会第78大会
    • Place of Presentation
      明治大学(生田)
    • Year and Date
      2014-09-11 – 2014-09-14
    • Related Report
      2014 Annual Research Report
  • [Presentation] Molecular evolution of photoreceptor genes between sister species and non-nueutral divergence along latitude.2014

    • Author(s)
      Ikeda, H., Gustafsson, L., Brochmann, C., Nagatani, A., Setoguchi, H.
    • Organizer
      Botany 2014 (American Society of Botany)
    • Place of Presentation
      Bose Conference Center, Idaho
    • Year and Date
      2014-07-26 – 2014-07-30
    • Related Report
      2014 Annual Research Report
  • [Book] 日本の野生植物 第4巻 イワウメ科(分担執筆)2017

    • Author(s)
      瀬戸口浩彰
    • Total Pages
      348
    • Publisher
      平凡社
    • Related Report
      2016 Annual Research Report
  • [Remarks] 京都大学大学院人間・環境学研究科 瀬戸口浩彰研究室

    • URL

      http://setolab.h.kyoto-u.ac.jp

    • Related Report
      2014 Annual Research Report

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Published: 2014-04-04   Modified: 2022-02-16  

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