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Why do organisms oscillate? – Investigation of biological function of glycolytic oscillations in yeast cells -

Research Project

Project/Area Number 26330326
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Life / Health / Medical informatics
Research InstitutionYokohama National University

Principal Investigator

Amemiya Takashi  横浜国立大学, 大学院環境情報研究院, 教授 (60344149)

Co-Investigator(Kenkyū-buntansha) 伊藤 公紀  横浜国立大学, 大学院環境情報研究院, 教授 (40114376)
山口 智彦  国立研究開発法人産業技術総合研究所, その他部局等, 研究員 (70358232)
Research Collaborator YAMAMOTO TETSUYA  東京都立産業技術高等専門学校, ものづくり工学科, 教授 (00259839)
SASAKI SATOSHI  東京工科大学, 応用生物学部, 教授 (70262110)
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2016: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2015: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2014: ¥3,120,000 (Direct Cost: ¥2,400,000、Indirect Cost: ¥720,000)
Keywords細胞 / 解糖系 / 振動反応 / 同期現象 / 酵母細胞 / がん細胞 / 解糖系振動 / 代謝 / 同期 / 細胞間コミュニケーション / 解糖系振動反応 / 情報伝達 / 生命機能
Outline of Final Research Achievements

This study has aimed to clarify biological function of oscillations and synchronization of organisms. We experimentally observed glycolytic oscillations in yeast cells at a single cell level, though yeasts were considered not to exhibit the oscillations above a critical cell density. Analyses of a mathematical model of glycolytic oscillations revealed that the efficiency of energy acquisition is about 7 to 8 % higher in the oscillatory glycolysis than in the stationary-state glycolysis. We also revealed that yeast cells encapsulated in alginate microparticles at a high cell-density exhibited complete synchronization in the glycolytic oscillations.Glycolytic oscillations in cervical cancer HeLa cells that have metabolic similarities with yeast cells were also observed at a single cell level for the first time.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (32 results)

All 2017 2016 2015 2014

All Journal Article (5 results) (of which Peer Reviewed: 2 results,  Acknowledgement Compliant: 1 results,  Open Access: 1 results) Presentation (26 results) (of which Int'l Joint Research: 7 results,  Invited: 10 results) Funded Workshop (1 results)

  • [Journal Article] がん(HeLa)細胞の解糖系振動反応の1細胞観察2017

    • Author(s)
      雨宮隆,柴田賢一,伊藤良洋,渡邉昌俊,伊藤公紀,山口智彦
    • Journal Title

      信学技報

      Volume: 116(437) Pages: 5-8

    • Related Report
      2016 Annual Research Report
  • [Journal Article] Collective and individual glycolytic oscillations in yeast cells encapsulated in alginate microparticles2015

    • Author(s)
      Amemiya, T., Obase, K., Hiramatsu, N., Itoh, K., Shibata, K., Takinoue, M., Yamamoto, T. & Yamaguchi , T.
    • Journal Title

      Chaos

      Volume: 25 Issue: 6 Pages: 0646061-0646067

    • DOI

      10.1063/1.4921692

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] マイクロカプセル内の酵母細胞における解糖系振動現象および同期現象2015

    • Author(s)
      雨宮隆,小長谷耕平,平松直樹,柴田賢一,伊藤公紀
    • Journal Title

      信学技報

      Volume: 115 Pages: 15-16

    • Related Report
      2015 Research-status Report
  • [Journal Article] Glycolytic synchronization in yeast cells via ATP and other metabolites: Mathematical analyses by two-dimensional reaction-diffusion models2014

    • Author(s)
      Serizawa, H., Amemiya, T., Itoh, K.
    • Journal Title

      Natural Science

      Volume: 6 Issue: 10 Pages: 719-732

    • DOI

      10.4236/ns.2014.610072

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] 癌細胞における解糖系振動反応2014

    • Author(s)
      雨宮 隆
    • Journal Title

      信学技報

      Volume: 114 Pages: 21-23

    • Related Report
      2014 Research-status Report
  • [Presentation] Glycolytic oscillations in cancer cells2016

    • Author(s)
      Takashi Amemiya, Kenichi Shibata, Yoshihiro Itoh
    • Organizer
      26th Annual Meeting of MRS-J (2016)
    • Place of Presentation
      横浜市開港記念会館(Yokohama)
    • Year and Date
      2016-12-19
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Electrochemical and Nanoscale Instabilities2016

    • Author(s)
      Tomohiko Yamaguchi
    • Organizer
      Gordon Research Conference on Oscillations & Dynamic Instabilities in Chemical Systems
    • Place of Presentation
      Stowe (VT, USA)
    • Year and Date
      2016-07-17
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Intra- and inter-cellular analysis of glycolytic oscillations in cervical cancer HeLa cells2016

    • Author(s)
      Kenichi Shibata, Takashi Amemiya, Masatoshi Watanabe, Kiminori Itoh, Tomohiko Yamaguchi
    • Organizer
      Internal Workshop, Symposium on Nonlinear Sciences - The history for 30 years and vision for the future -
    • Place of Presentation
      AIST waterfront, Tokyo
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Distance dependency of synchronized glycolytic oscillations in yeast cells encapsulated in alginate microparticles2016

    • Author(s)
      Yu Kawakita, Kenichi Shibata, Takashi Amemiya, Kiminori Itoh, Tomohiko Yamaguchi
    • Organizer
      Internal Workshop, Symposium on Nonlinear Sciences - The history for 30 years and vision for the future -
    • Place of Presentation
      AIST waterfront, Tokyo
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Matter and life, and beyond2016

    • Author(s)
      Tomohiko Yamaguchi
    • Organizer
      Internal Workshop, Symposium on Nonlinear Sciences - The history for 30 years and vision for the future -
    • Place of Presentation
      AIST waterfront, Tokyo
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 大域結合されたβ細胞集団の膜電位バースト2016

    • Author(s)
      Du Yiechen,柴田賢一,真原仁,雨宮隆
    • Organizer
      第26回非線形反応と協同現象研究会
    • Place of Presentation
      明治大学(東京)
    • Related Report
      2016 Annual Research Report
  • [Presentation] Intra and inter-cellular analysis of glycolytic oscilltions in cervical cancer HeLa cells2016

    • Author(s)
      柴田賢一,雨宮隆,伊藤良洋,渡邉昌俊,伊藤公紀,山口智彦
    • Organizer
      第26回非線形反応と協同現象研究会
    • Place of Presentation
      明治大学(東京)
    • Related Report
      2016 Annual Research Report
  • [Presentation] 酵母細胞集団間の解糖系同期現象の距離依存性解析2016

    • Author(s)
      川北侑羽,柴田賢一,雨宮隆
    • Organizer
      第26回非線形反応と協同現象研究会
    • Place of Presentation
      明治大学(東京)
    • Related Report
      2016 Annual Research Report
  • [Presentation] HeLa細胞の解糖系振動反応のpH依存性2016

    • Author(s)
      麻野拓摩,柴田賢一,雨宮隆
    • Organizer
      第26回非線形反応と協同現象研究会
    • Place of Presentation
      明治大学(東京)
    • Related Report
      2016 Annual Research Report
  • [Presentation] 自己組織化とバイオミメティクス2016

    • Author(s)
      山口智彦
    • Organizer
      第67回コロイドおよび界面化学討論会
    • Place of Presentation
      旭川教育大学(北海道)
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] ジャボチンスキーのおくりもの2016

    • Author(s)
      山口智彦
    • Organizer
      第26回非線形反応と協同現象研究会
    • Place of Presentation
      明治大学(東京)
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Life and Matter, and Beyond2016

    • Author(s)
      Tomohiko Yamaguchi
    • Organizer
      先端科学技術シンポジウム-自己組織化と新しいナノ物質科学-
    • Place of Presentation
      秋葉原プラザ(東京)
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Metabolic network and glycolytic oscillations in yeast and cancer cells2015

    • Author(s)
      Amemiya, T., Obase, K., Hiramatsu, N., Itoh, K., Shibata, K., Takinoue, M., Yamamoto, T. & Yamaguchi, T.
    • Organizer
      Pacifichem 2015
    • Place of Presentation
      ホノルル,ハワイ
    • Year and Date
      2015-12-15
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Function and application of glycolytic oscillations in cells2015

    • Author(s)
      Amemiya, T.
    • Organizer
      25th Annual Meeting of MRS-Japan 2015
    • Place of Presentation
      横浜市開港記念会館,横浜
    • Year and Date
      2015-12-08
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] 代謝振動反応を指標とした休眠細胞検出法の確立に向けた基礎研究2015

    • Author(s)
      伊藤良洋,柴田賢一,伊藤公紀,雨宮隆
    • Organizer
      第25回非線形反応と協同現象研究会
    • Place of Presentation
      旭川医科大学
    • Year and Date
      2015-10-03
    • Related Report
      2015 Research-status Report
  • [Presentation] 細胞の階層性ダイナミクスを用いた毒性評価概念の創出2015

    • Author(s)
      小長谷耕平,平松直樹,柴田賢一,伊藤公紀,雨宮隆
    • Organizer
      第25回非線形反応と協同現象研究会
    • Place of Presentation
      旭川医科大学
    • Year and Date
      2015-10-03
    • Related Report
      2015 Research-status Report
  • [Presentation] 細胞における解糖系振動反応の医療情報への応用2015

    • Author(s)
      雨宮隆
    • Organizer
      電子情報通信学会,2015ソサイエティ大会
    • Place of Presentation
      東北大学川内北キャンパス
    • Year and Date
      2015-09-09
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] マイクロカプセル内の酵母細胞における解糖系振動現象および同期現象2015

    • Author(s)
      雨宮隆,小長谷耕平,平松直樹,柴田賢一,伊藤公紀
    • Organizer
      電子情報通信学会 有機エレクトロニクス研究会
    • Place of Presentation
      大濱信泉記念館,石垣市
    • Year and Date
      2015-04-29
    • Related Report
      2015 Research-status Report
  • [Presentation] Glycolytic oscillations in yeast and cancer cells2014

    • Author(s)
      Amemiya, T.
    • Organizer
      24th Annual Meeting of MRS-Japan 2014
    • Place of Presentation
      横浜市開港記念会館(横浜)
    • Year and Date
      2014-12-10 – 2014-12-12
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] 酵母解糖系における振動反応の時空間制御2014

    • Author(s)
      平松直樹,柴田賢一,伊藤公紀,山本哲也,山口智彦,雨宮隆
    • Organizer
      第24回非線形反応と協同現象研究会
    • Place of Presentation
      東京電気大学(千住)
    • Year and Date
      2014-12-06
    • Related Report
      2014 Research-status Report
  • [Presentation] 酵母マイクロカプセル化における解糖系振動反応の酵母間相互作用の解析2014

    • Author(s)
      小長谷耕平,柴田賢一,伊藤公紀,瀧ノ上正浩,雨宮隆
    • Organizer
      第24回非線形反応と協同現象研究会
    • Place of Presentation
      東京電気大学(千住)
    • Year and Date
      2014-12-06
    • Related Report
      2014 Research-status Report
  • [Presentation] 酵母におけるG0細胞周期と解糖系振動反応の関連性の解析2014

    • Author(s)
      伊藤良洋,柴田賢一,伊藤公紀,雨宮隆
    • Organizer
      第24回非線形反応と協同現象研究会
    • Place of Presentation
      東京電気大学(千住)
    • Year and Date
      2014-12-06
    • Related Report
      2014 Research-status Report
  • [Presentation] 酵母解糖系振動反応を利用したバイオアッセイの検討2014

    • Author(s)
      飯塚一歩,柴田賢一,伊藤公紀,雨宮隆
    • Organizer
      第24回非線形反応と協同現象研究会
    • Place of Presentation
      東京電気大学(千住)
    • Year and Date
      2014-12-06
    • Related Report
      2014 Research-status Report
  • [Presentation] 癌細胞における解糖系振動反応2014

    • Author(s)
      雨宮 隆
    • Organizer
      電気情報通信学会 有機エレクトロニクス
    • Place of Presentation
      奄美大島商工会議所(鹿児島)
    • Year and Date
      2014-11-28 – 2014-11-29
    • Related Report
      2014 Research-status Report
  • [Presentation] Cell-to-cell communication in yeasts via ATP2014

    • Author(s)
      Amemiya, T.
    • Organizer
      IUMRS-ICA2014
    • Place of Presentation
      福岡大学(福岡)
    • Year and Date
      2014-08-24 – 2014-08-30
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] Metabolic network and glycolytic oscillations in yest and other cells2014

    • Author(s)
      Amemiya, T., Miyata, T., Hiramatsu, N., Shibata, K., Itoh, K.
    • Organizer
      Gordon Research Conference, Oscillations & Dynamic Instabilities in Chemical Systems
    • Place of Presentation
      Girona, Spain
    • Year and Date
      2014-07-13 – 2014-07-18
    • Related Report
      2014 Research-status Report
  • [Funded Workshop] Internal Workshop, Symposium on Nonlinear Sciences - The history for 30 years and vision for the future -2016

    • Place of Presentation
      AIST Waterfront (Tokyo)
    • Year and Date
      2016-09-07
    • Related Report
      2016 Annual Research Report

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Published: 2014-04-04   Modified: 2018-03-22  

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