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Elucidation of degradation genes of cold-resistant hydrocarbon degrading bacteria and multifaceted functional analysis of plant growth promotion Rhizospheric bacteria

Research Project

Project/Area Number 26340067
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Modeling and technologies for environmental conservation and remediation
Research InstitutionMuroran Institute of Technology

Principal Investigator

CHANG Young-Cheol  室蘭工業大学, 工学研究科, 教授 (30422025)

Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2016: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2015: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2014: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
KeywordsPenicillium / 炭化水素 / 根圏土壌 / 低温域 / 南極 / メタゲノム / アルキルフェーノル / 低温分解 / MnPの精製 / Penicillium sp. CHY-2株 / 寒冷地 / DGGE / gene / Gene
Outline of Final Research Achievements

Biodegradability of eight different aliphatic and aromatic hydrocarbons (octane, decane, dodecane, ethylbenzene, butylbenzene, naphthalene, acenaphthene, and benzo[a]pyrene) was confirmed using Penicillium sp. CHY - 2 isolated from Antarctic soil. In addition, it was found that the enzyme manganese peroxidase (MnP) derived from strain CHY -2 was involved in the degradation of decane which showed the highest degradation rate among the tested aliphatic and aromatic hydrocarbons. Furthermore, various rhizosphere microorganisms were isolated and found to be involved in hydrocarbon decomposition. As a result of confirming the gene of strain CHY-2 responsible for degradation, genes encoding cytochrome P450 hydroxylase, lignin peroxidase and vanillyl alcohol oxidase were confirmed.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (40 results)

All 2017 2016 2015 2014 Other

All Journal Article (16 results) (of which Int'l Joint Research: 7 results,  Peer Reviewed: 16 results,  Open Access: 5 results,  Acknowledgement Compliant: 10 results) Presentation (19 results) (of which Int'l Joint Research: 9 results,  Invited: 1 results) Book (1 results) Remarks (3 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] Biodegradation of aliphatic and aromatic hydrocarbons using the filamentous fungus Penicillium sp. CHY-2 and characterization of its manganese peroxidase activity2017

    • Author(s)
      Muthusamy Govarthanan,Soichiro Fuzisawa,Toshiki Hosogaia, Young-Cheol Chang
    • Journal Title

      RSC Advances

      Volume: 7 Issue: 34 Pages: 20716-20723

    • DOI

      10.1039/c6ra28687a

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Bioremediation of heavy metals using an endophytic bacterium Paenibacillus sp. RM isolated from the roots of Tridax procumbens2016

    • Author(s)
      M. Govarthanana, R. Mythili, T. Selvankumar, S. Kamala-Kannan, A. Rajasekar, Young-Cheol Chang
    • Journal Title

      3Biotech

      Volume: 6 Issue: 2 Pages: 242-248

    • DOI

      10.1007/s13205-016-0560-1

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Degradation of toxic compounds at low and medium temperature conditions using isolated fungus2016

    • Author(s)
      Young-Cheol Chang, Soichiro Fuzisawa, M. Venkateswar Reddy, Hikari Kobayashi, Eri Yoshida, Yuka Yajima, Tamotsu Hoshino, and DuBok Choi
    • Journal Title

      CLEAN: Soil Air Water

      Volume: 44 Issue: 8 Pages: 992-1000

    • DOI

      10.1002/clen.201500753

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Degradation of toxic compounds at low and medium temperature conditions using isolated fungus2016

    • Author(s)
      Young-Cheol Chang, Soichiro Fuzisawa, M. Venkateswar Reddy, Hikari Kobayashi, Eri Yoshida, Yuka Yajima, Tamotsu Hoshino, DuBok Choi
    • Journal Title

      CLEAN-Soil, Air, Water

      Volume: なし

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Production of poly-3-hydroxybutyrate (P3HB) and poly-3-(hydroxybutyrate-co-hydroxyvalerate) P(3HB-co-3HV) from synthetic wastewater using Hydrogenophaga palleronii2016

    • Author(s)
      M. Venkateswar Reddy, Yasuteru Mawatari, Yuka Yajima, Kohki Satoh, S. Venkata Mohan, Young-Cheol Chang
    • Journal Title

      Bioresource Technology

      Volume: なし Pages: 155-162

    • DOI

      10.1016/j.biortech.2016.03.025

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Antihyperglycemic and antioxidant activities of polysaccharide produced from Pleurotus ferulae in streptozotocin-induced diabetic rats2016

    • Author(s)
      Dubok Choi, YuLan Piao, Sun-Jong Yu, Yeon-Woong Lee, Dong-Hoon Lim, Young-Cheol Chang, Sang-Shin Park, Myung-Koo Lee, Wol-Suk Cha, Don-Sang You, Hoon Cho
    • Journal Title

      Korean J. Chem. Eng.

      Volume: なし Issue: 6 Pages: 1872-1882

    • DOI

      10.1007/s11814-016-0007-8

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Isolation of Bacillus sp. strains capable of decomposing alkali lignin and their application in combination with lactic acid bacteria for enhancing cellulase performance2015

    • Author(s)
      Young-Cheol Chang, DuBok Choi, Kazuhiro Takamizawa, Shintaro Kikuchi
    • Journal Title

      Bioresource Technology

      Volume: 152 Pages: 429-436

    • DOI

      10.1016/j.biortech.2013.11.032

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Bio-augmentation of Cupriavidus sp. CY-1 into 2,4-D contaminated soil: microbial community analysis by culture dependent and independent techniques2015

    • Author(s)
      Young-Cheol Chang, M. Venkateswar Reddy, Honoka Umemoto, Yuki Sato, Mi-Hye Kang, Yuka Yajima, Shintaro Kikuchi
    • Journal Title

      PLoS ONE

      Volume: なし Issue: 12 Pages: e0145057-e0145057

    • DOI

      10.1371/journal.pone.0145057

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Degradation and conversion of toxic compounds into useful bioplastics by Cupriavidus sp. CY-1: Relative expression of PhaC gene under phenol and nitrogen stress2015

    • Author(s)
      Motakatla Venkateswer Reddy , Yuka Yajima, Yasuteru Mawatari, Tamotsu Hoshino, Young-Cheol Chang
    • Journal Title

      Green Chemistry

      Volume: 17 Issue: 9 Pages: 4560-4569

    • DOI

      10.1039/c5gc01156f

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Poly-3-hydroxybutyrate (PHB) production from alkylphenols, mono and poly-aromatic hydrocarbons using Bacillus sp. CYR1: A new strategy for wealth from waste2015

    • Author(s)
      M. Venkateswar Reddy, Yasuteru Mawatari, Yuka Yajima, Chigusa Seki,Tamotsu Hoshino, Young-Cheol Chang
    • Journal Title

      Bioresource Technology

      Volume: 192 Pages: 711-717

    • DOI

      10.1016/j.biortech.2015.06.043

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Genome Sequence of Aquamicrobium sp. SK-2, A Polychlorinated Biphenyl-Utilizing Bacterium Isolated from Sewage Sludge2015

    • Author(s)
      Young-Cheol Chang, Ken Sawada, Eun-Sook Kim, Kweon Jung, and Shintaro Kikuchi
    • Journal Title

      Genome Announcements

      Volume: なし Issue: 3

    • DOI

      10.1128/genomea.00439-15

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] 南極由来の真菌Penicillium sp. CHY-2 株による4-ブチルフェノールの低温分解及びTween 80の効果に関する研究2015

    • Author(s)
      藤澤宗一郎, 小林 ひかり, 吉田 愛里, 大平 勇一, M. Venkateswar Reddy, チャンヨンチョル, 菊池 慎太郎
    • Journal Title

      土木工学会論文集G(環境)

      Volume: 71 Pages: 405-411

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Aquamicrobium sp. SK-2株由来Biphenyl分解酵素BphCの精製と分解特性2015

    • Author(s)
      菅原 豪人, 小山 大貴, 澤田 研, チャンヨンチョル, 菊池 慎太郎
    • Journal Title

      土木工学会論文集G(環境)

      Volume: 71 Pages: 413-419

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Characterization, stability, and antioxidant activity of Salicornia herbaciea seed oil2014

    • Author(s)
      Dubok Choi, Geum-Sook Lim, Yu Lan Piao, On-You Choi,Ki-An Cho, Choon-Bae Park, Young-Cheol Chang, Young-Il Song, Myung-Koo Lee, and Hoon Cho
    • Journal Title

      Korean J. Chem. Eng.

      Volume: 31 Issue: 12 Pages: 2221-2228

    • DOI

      10.1007/s11814-014-0163-7

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] A study on liquid culture of Pleurotus florid Mutant L-456 using waste vegetable oil containing high fatty acid2014

    • Author(s)
      Ki-An Cho, On-You Choi, Hyun Suk Choi, Ha Young Koh, and Young-Cheol Chang
    • Journal Title

      J. of Adv. Eng. and Tech.

      Volume: 6 Pages: 7-12

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] A new biological pretreatment Method for enhancing cellulase performabce2014

    • Author(s)
      Young-Choel Chang, Shintaro Kikuchi
    • Journal Title

      Journal of Bioremediation & Biodegradation

      Volume: 5 Issue: 02 Pages: 1-2

    • DOI

      10.4172/2155-6199.1000e142

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] Penicillium sp. CHY-2株による模擬汚染土壌中の4-tert-ブチルフェノール分解特性2016

    • Author(s)
      小野寺瑠依,梅本穂乃香,矢島 由佳,チャン ヨンチョル
    • Organizer
      第68回日本生物工学会年次大会講演集
    • Place of Presentation
      富山国際会議場、富山市、富山県
    • Year and Date
      2016-09-28
    • Related Report
      2016 Annual Research Report
  • [Presentation] Degradation of petroleum hydrocarbons using the fungus Penicillium sp. CHY-2 and bacteria Pseudomonas aeruginosa TW-12016

    • Author(s)
      Soichiro Fuzisawa, Yuko Asano, Hikaru Fukuda, Toshiki Hosogai, Satoru Hayashi, Yuka Yajima, Young-Cheol Chang
    • Organizer
      7th Forum on Studies of the Environmental and Public Health Issues in the Asian Mega-cities (EPAM2016)
    • Place of Presentation
      Muroran Institute of Technology, Muroran, Hokkaido, Japan
    • Year and Date
      2016-09-01
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Degradation of 4-tert-butylphenol from the artificially contaminated soil using Penicillium sp. CHY-22016

    • Author(s)
      Rui Onodera, Honoka Umemoto, Yuki Nakamura, Yuka Yajima, Young-Cheol Chang
    • Organizer
      7th Forum on Studies of the Environmental and Public Health Issues in the Asian Mega-cities (EPAM2016)
    • Place of Presentation
      Muroran Institute of Technology, Muroran, Hokkaido, Japan
    • Year and Date
      2016-09-01
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Characterization of Cupriavidus sp. CY-1 and its bio-augmentation into 2,4-D contaminated soil2016

    • Author(s)
      Honoka Umemoto, M. Venkateswar Reddy, Yuka Yajima, Young-Cheol Chang
    • Organizer
      JSED2016
    • Place of Presentation
      Muroran, Japan
    • Year and Date
      2016-03-11
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Biodegradation of 4-butylphenol at low temperature conditions using the isolated fungi2016

    • Author(s)
      Soichiro Fuzisawa, Yuka Yajima, Young-Cheol Chang
    • Organizer
      JSED2016
    • Place of Presentation
      Muroran, Japan
    • Year and Date
      2016-03-11
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Purification and characteristics of a Biphenyl-degrading enzyme BphC from strain SK-22016

    • Author(s)
      Hideto Sugawara, Tatsuya Koike, Yuka Yajima, Ken Sawada, Young-Cheol Chang
    • Organizer
      JSED2016
    • Place of Presentation
      Muroran, Japan
    • Year and Date
      2016-03-11
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Metabolic control of benzaldehyde oxidoreduction reaction by Pseudomonas putida2016

    • Author(s)
      Ryohei Yanagawa, Young-Cheol Chang, Koji Uwai and Shintaro Kikuchi
    • Organizer
      JSED2016
    • Place of Presentation
      Muroran, Japan
    • Year and Date
      2016-03-11
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Aquamicrobium sp. SK-2株由来Biphenyl分解酵素BphCの精製と分解特性2015

    • Author(s)
      菅原 豪人, 小山 大貴, 澤田 研, チャンヨンチョル, 菊池 慎太郎
    • Organizer
      第52回環境工学フォーラム
    • Place of Presentation
      福島県, 郡山市
    • Year and Date
      2015-11-27
    • Related Report
      2015 Research-status Report
  • [Presentation] 南極由来の真菌Penicillium sp. CHY-2 株による4-ブチルフェノールの低温分解及びTween 80の効果に関する研究2015

    • Author(s)
      藤澤宗一郎, 小林 ひかり, 吉田 愛里, 大平 勇一, M. Venkateswar Reddy, チャンヨンチョル, 菊池 慎太郎、
    • Organizer
      第52回環境工学フォーラム
    • Place of Presentation
      福島県, 郡山市
    • Year and Date
      2015-11-27
    • Related Report
      2015 Research-status Report
  • [Presentation] Isolation and characterization of Cupriavidus sp. CY-1 and its bio-augmentation into 2,4-D contaminated soil: microbial community analysis by culture dependent and independent techniques2015

    • Author(s)
      Young-Cheol Chang, Honoka Umemoto, Soichiro Fuzisawa, Hideto Sugawara, M. Venkateswar Reddy, Yuka Yajima, Shintaro Kikuchi
    • Organizer
      EPAM2015
    • Place of Presentation
      Xiamen, China
    • Year and Date
      2015-10-30
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Polyhydroxybutyrate (PHB) production with Cupriavidus sp. CY-1 using various toxic compounds: PhaC gene expression analysis under stress conditions2015

    • Author(s)
      M. Venkateswar Reddy, Young-Cheol Chang
    • Organizer
      EPAM2015
    • Place of Presentation
      Xiamen, China
    • Year and Date
      2015-10-30
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] アルキルフェノール及び多環芳香族炭化水素を原料としたBacillus sp. CYR1株によるポリヒドロキシブチレート(PHB)の産生2015

    • Author(s)
      モタカトラ カテスワーレディ, 矢島 由佳, 張 ヨンチョル
    • Organizer
      第67回日本生物工学大会
    • Place of Presentation
      鹿児島県, 鹿児島市
    • Year and Date
      2015-10-26
    • Related Report
      2015 Research-status Report
  • [Presentation] Concepts of Natural Type River-Rehabilitation and Outlook of River Ecosystem Restoration2015

    • Author(s)
      Young-Cheol Chang
    • Organizer
      Proceedings of International Conference: Communications for Safe Cities
    • Place of Presentation
      Seoul, Korea
    • Year and Date
      2015-10-07
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Phenol, Alkylphenols, and Polycyclic Aromatic Hydrocarbons (PAHs) Degradation Using the Bacteria Hydrogenophaga palleronii2015

    • Author(s)
      M. Venkateswar Reddy, Young-Cheol Chang, Shintaro Kikuchi
    • Organizer
      Joint Seminar on Environmental Science and Disaster Mitigation Research 2015
    • Place of Presentation
      環境科学・防災研究センター(北海道室蘭市)
    • Year and Date
      2015-03-13 – 2015-03-14
    • Related Report
      2014 Research-status Report
  • [Presentation] Selection and characterization of an alkylphenol-degrading fungus isolated from Antarctic soil2014

    • Author(s)
      Young-Cheol Chang, Eri Yoshida, Yuki Sato, Daiki Koyama, M. Venkateswar Reddy, Tatsuo Iwasa, Shintaro Kikuchi
    • Organizer
      The 5th Forum on Studies of the Environmental and Public Health Issues in the Asia Mega-cities (EPAM2014)
    • Place of Presentation
      Seoul,Korea
    • Year and Date
      2014-11-10 – 2014-11-11
    • Related Report
      2014 Research-status Report
  • [Presentation] An Environmentally-Friendly Pretreatment Method for Enhancing Cellulase Performance2014

    • Author(s)
      Young-Cheol Chang, Shintaro Kikuchi
    • Organizer
      The 5th Forum on Studies of the Environmental and Public Health Issues in the Asia Mega-cities (EPAM2014)
    • Place of Presentation
      Seoul,Korea
    • Year and Date
      2014-11-10 – 2014-11-11
    • Related Report
      2014 Research-status Report
  • [Presentation] 2,4-D分解菌Y1株による汚染土壌浄化における微生物相の多様性評価2014

    • Author(s)
      Yuki Sato, Honoka Umemoto, Young-Cheol Chang, Shintaro Kikuchi
    • Organizer
      環境微生物系学会合同大会
    • Place of Presentation
      アクトシティ浜松(静岡県浜松市)
    • Year and Date
      2014-10-21 – 2014-10-24
    • Related Report
      2014 Research-status Report
  • [Presentation] 南極由来真菌による4-ブチルフェノール分解特性2014

    • Author(s)
      吉田 愛里、山内 瑞穂、星野 保、張ヨンチョル、菊池 愼太郎
    • Organizer
      日本生物工学会
    • Place of Presentation
      札幌コンベンションセンター(北海道札幌市)
    • Year and Date
      2014-09-09 – 2014-09-11
    • Related Report
      2014 Research-status Report
  • [Presentation] ビフェニル分解酵素BphCの精製及び特性評価2014

    • Author(s)
      小山大貴、澤田研、張ヨンチョル、菊池慎太郎
    • Organizer
      日本生物工学会
    • Place of Presentation
      札幌コンベンションセンター(北海道札幌市)
    • Year and Date
      2014-09-09 – 2014-09-11
    • Related Report
      2014 Research-status Report
  • [Book] 室蘭工大 未来をひらく技術と研究2014

    • Author(s)
      関根 ちひろ、武田 圭生、桃野 直樹、雨海 有佑、清水 一道、佐々木 眞、澤口 直哉、田畑 昌祥、馬渡 康輝、平井 伸治、葛谷 俊博、香山 晃、桃野 正、長船 康裕、田邉 博義、板倉 賢一、空閑 良壽、山中 真也、中野 博人、張ヨンチョル (分担執筆)
    • Total Pages
      230
    • Publisher
      北海道新聞社刊
    • Related Report
      2014 Research-status Report
  • [Remarks] 室蘭工業大学 研究者データベース

    • URL

      http://rdsoran.muroran-it.ac.jp/html/100000221_ja.html

    • Related Report
      2016 Annual Research Report
  • [Remarks] 微生物工学研究室

    • URL

      http://www.mmm.muroran-it.ac.jp/~ychang/

    • Related Report
      2015 Research-status Report
  • [Remarks] 研究者データーベース

    • URL

      http://rd-soran.muroran-it.ac.jp/profile/ja.2GDBVy94mRvrKNMaBJdBnQ==.html

    • Related Report
      2015 Research-status Report
  • [Patent(Industrial Property Rights)] ポリヒドロキシブチレートの製造方法及び該方法に利用される新規微生物2015

    • Inventor(s)
      チャン ヨンチョル
    • Industrial Property Rights Holder
      チャン ヨンチョル
    • Industrial Property Rights Type
      特許
    • Filing Date
      2015-06-10
    • Related Report
      2015 Research-status Report

URL: 

Published: 2014-04-04   Modified: 2021-12-27  

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