Development of a high efficient screening technique of small molecules binding to a target site of protein
Project/Area Number |
26350976
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Research Category |
Grant-in-Aid for Scientific Research (C)
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Allocation Type | Multi-year Fund |
Section | 一般 |
Research Field |
Chemical biology
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Research Institution | Institute of Physical and Chemical Research |
Principal Investigator |
Kondoh Yasumitsu 国立研究開発法人理化学研究所, 環境資源科学研究センター, 専任研究員 (80333342)
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Project Period (FY) |
2014-04-01 – 2017-03-31
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Project Status |
Completed (Fiscal Year 2016)
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Budget Amount *help |
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2016: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2015: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2014: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
|
Keywords | ケミカルアレイ / プロリンリンカー / p38MAPキナーゼ |
Outline of Final Research Achievements |
Small molecules are important tools to investigate biological system in chemical biology research. A strategy is important for efficient screening of small molecules specifically binding to target protein from chemical library. In this research, I have developed technology to improve detectivity of chemical array and method for efficient screening of small molecules specifically binding to a focused site of target protein using the advanced chemical array.
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Report
(4 results)
Research Products
(68 results)
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[Journal Article] Chemical-induced inhibition of blue light-mediated seedling development caused by disruption of upstream signal transduction involving cryptochromes in Arabidopsis thaliana.2017
Author(s)
Ong WD, Okubo-Kurihara E, Kurihara Y, Shimada S, Makita Y, Kawashima M, Honda K, Kondoh Y, Watanabe N, Osada H, Cutler SR, Sudesh K, Matsui M
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Journal Title
Plant Cell Physiol
Volume: 58
Pages: 95-105
DOI
Related Report
Peer Reviewed / Open Access / Int'l Joint Research
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[Journal Article] Potential role of the formation of tunneling nanotubes in HIV-1 spread in macrophages.2016
Author(s)
Hashimoto M, Bhuyan F, Hiyoshi M, Noyori O, Nasser H, Miyazaki M, Saito T, Kondoh Y, Osada H, Kimura S, Hase K, Ohno H, Suzu S
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Journal Title
J Immunol
Volume: 196
Issue: 4
Pages: 1832-1841
DOI
Related Report
Peer Reviewed / Open Access / Int'l Joint Research
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[Journal Article] A Novel Antiviral Target Structure Involved in the RNA Binding, Dimerization, and Nuclear Export Functions of the Influenza A Virus Nucleoprotein.2015
Author(s)
Kakisaka M, Sasaki Y, Yamada K, Kondoh Y, Hikono H, Osada H, Tomii K, Saito T, Aida Y
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Journal Title
PLoS Pathog
Volume: 11
Issue: 7
Pages: e1005062-e1005062
DOI
Related Report
Peer Reviewed / Open Access
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[Journal Article] Toxic tau oligomer formation blocked by capping of cysteine residues with 1,2-dihydroxybenzene groups.2015
Author(s)
Soeda Y, Yoshikawa M, Almeida OF, Sumioka A, Maeda S, Osada H, Kondoh Y, Saito A, Miyasaka T, Kimura T, Suzuki M, Koyama H, Yoshiike Y, Sugimoto H, Ihara Y, Takashima A
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Journal Title
Nat Commun
Volume: 6
Issue: 1
Pages: 10216-10216
DOI
Related Report
Peer Reviewed / Open Access / Int'l Joint Research
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[Journal Article] Synthesis of Vpr-binding derivative for use as a novel HIV-1 inhibitor.2015
Author(s)
Hagiwara K, Ishii H, Murakami T, Takeshima SN, Chutiwitoonchai N, Kodama EN, Kawaji K, Kondoh Y, Honda K, Osada H, Tsunetsugu-Yokota Y, Suzuki M, Aida Y
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Journal Title
PLoS One
Volume: 10
Issue: 12
Pages: e0145573-e0145573
DOI
Related Report
Peer Reviewed / Open Access
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[Journal Article] A small compound targeting TACC3 revealed its different spatiotemporal contributions for spindle assembly in cancer cells.2014
Author(s)
Yao R, Kondoh Y, Natsume Y, Yamanaka H, Inoue M, Toki H, Takagi R, Shimizu T, Yamori T, Osada H, Noda T
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Journal Title
Oncogene
Volume: in press
Issue: 33
Pages: 1-11
DOI
Related Report
Peer Reviewed / Open Access
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[Presentation] Identification of the molecular targets and electrophilic properties of covalent-binding anti-cancer compounds.2016
Author(s)
Shota Uesugi, Makoto Muroi, Yasumitsu Kondoh, Tetsuro Yamashita, Yoshihito Shiono, Masaru Hashimoto, Hiroyuki Osada, Ken-ichi Kimura
Organizer
1st UGAS, Iwate University International Symposium 2016
Place of Presentation
Education and Research Building, Iwate University (Morioka, Iwate)
Year and Date
2016-12-17
Related Report
Int'l Joint Research
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[Presentation] Effect of fluoropyrimidines on aflatoxin production.2016
Author(s)
Toshiyoshi Yamamoto, Takahiro Kagemoto, Kurin Iimura, Yasumitsu Kondoh, Kaori Honda, Hiroyuki Osada, Shohei Sakudai
Organizer
International Symposium of Mycotoxicology 2016
Place of Presentation
Yayoi Auditorium, The University of Tokyo (Tokyo)
Year and Date
2016-12-01
Related Report
Int'l Joint Research
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[Presentation] The Unusual Suspects: Fragment Screening of Carbohydrate-binding Proteins.2016
Author(s)
Jonas Aretz, Upendra Rao Anumala, Paul Robin Wratil, Hannes Baukmann, Eike-Christian Wamhoff, Jonas Hanske, Hoang Giang Nguyen, Yasumitsu Kondoh, Kaori Honda, Nobumoto Watanabe, Hiroyuki Osada, Werner Reutter, Marc Nazae, Christoph Rademacher.
Organizer
10th Drug Design & Medicinal Chemistry
Place of Presentation
Maritim Hotel Berlin (Berlin, Germany)
Year and Date
2016-05-11
Related Report
Int'l Joint Research
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[Presentation] Identification of MTH1 inhibitors by chemical arrays.2016
Author(s)
Tatsuro Kawamura, Makoto Kawatani, Yasumitsu Kondoh, Makoto Muroi, Yushi Futamura, Harumi Aono, Miho Tanaka, Kaori Honda, Hiroyuki Osada
Organizer
RIKEN-Max Planck Joint Research Center Fifth Annual Symposium
Place of Presentation
Harnack-Haus, Tagungshotel der Max-Planck-Gesellschaft (Berlin, Germany)
Year and Date
2016-04-18
Related Report
Int'l Joint Research
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[Presentation] Fragment arrays for early druggability assessments.2016
Author(s)
Jonas Aretz, Yasumitsu Kondoh, Kaori Honda, Upendra Rao Anumala, Marc Nazare, Nobumoto Watanabe, Hiroyuki Osada, Christoph Rademacher
Organizer
RIKEN-Max Planck Joint Research Center Fifth Annual Symposium
Place of Presentation
Harnack-Haus, Tagungshotel der Max-Planck-Gesellschaft (Berlin, Germany)
Year and Date
2016-04-18
Related Report
Int'l Joint Research
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[Presentation] Identification of NTCP-targeting small molecules that inhibit HBV entry by cell-based and in vitro technologies.2015
Author(s)
Watashi K, Tsukuda S, Shimura S, Kaneko M, Sluder A, Peel M, Kamisuki S, Matsunaga S, Morishita R, Futamura Y, Kondoh Y, Suzuki R, Aizaki H, Sugiyama M, Borroto-Esoda K, Ryo A, Sugawara F, Osada H, Tanaka Y, Mizokami M, Wakita T
Organizer
2015 International Meeting on Molecular Biology of Hepatitis B Viruses
Place of Presentation
Dolce Bad Nauheim (Germany)
Year and Date
2015-10-04
Related Report
Int'l Joint Research
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[Presentation] Chemical array for screening of bio-active compounds.2015
Author(s)
Yasumitsu Kondoh, Kaori Honda, Tomomi Sekine, Nobumoto Watanabe, Hiroyuki Osada
Organizer
RIKEN-Max Planck Joint Research Center for Systems Chemical Biology The Fourth Symposium
Place of Presentation
Kobe Port Island Center (Kobe, Japan)
Year and Date
2015-05-11
Related Report
Int'l Joint Research
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[Presentation] Identification of low-molecular inhibitors for salicylic acid signaling pathway by a high-throughput chemical screening2015
Author(s)
Nobuaki Ishihama, Yoshiteru Noutoshi, Seung-won Choi, Ivana Saska, Yuko Nomura, Hirofumi Nakagami, Kazutaka Murayama, Mikako Shirouzu, Yasumitsu Kondoh, Hiroyuki Osada, Ken Shirasu
Organizer
第56回日本植物生理学会年会
Place of Presentation
東京農業大学世田谷キャンパス(東京)
Year and Date
2015-03-16 – 2015-03-18
Related Report
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