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Simulation Code Optimization for DNS of Turbulence toward Peta-scale Computing

Research Project

Project/Area Number 26390130
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Computational science
Research InstitutionKobe University

Principal Investigator

YOKOKAWA MITSUO  神戸大学, システム情報学研究科, 教授 (70358307)

Co-Investigator(Kenkyū-buntansha) 森下 浩二  神戸大学, 計算科学教育センター, 特命助教 (50634648)
Co-Investigator(Renkei-kenkyūsha) ISHIHARA Takashi  名古屋大学, 大学院工学研究科, 准教授 (10262495)
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,510,000 (Direct Cost: ¥2,700,000、Indirect Cost: ¥810,000)
Fiscal Year 2016: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2015: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2014: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
KeywordsDirect Simulation / Parallel Computation / Tubulence / Phase Shift Method / K Computer / 直接数値シミュレーション / 並列計算 / エイリアス誤差除去 / スーパーコンピュータ / 一様等方性乱流 / 並列化コード
Outline of Final Research Achievements

A parallel direct numerical simulation (DNS) code was developed on the K computer for solving the Navier-Stokes equations in a box with periodic boundary conditions for three orthogonal axes. The objective of the code is to simulate behaviors of homogeneous, isotropic incompressible turbulent flow, or canonical turbulent flow, which is the most standard flow among turbulent flows without boundary walls. Pesudo-spectral method is used for discretization in 3-dimensional space and forth-order Runge-Kutta method is used for temporal discretization. Hybrid parallelization with both OpenMP and MPI are adopted in the code. The DNS with grid points of 12288 cubed were carried out on the K computer with sustained performance of 2.2% on the 37,376 compute nodes. Simulation data for about Reynolds number 2300 were obtained.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (9 results)

All 2016 2015 2014

All Journal Article (4 results) (of which Peer Reviewed: 3 results,  Open Access: 2 results,  Acknowledgement Compliant: 3 results) Presentation (5 results) (of which Int'l Joint Research: 4 results)

  • [Journal Article] Energy spectrum in high-resolution direct numerical simulations of turbulence2016

    • Author(s)
      Takashi Ishihara, Koji Morishita, Mitsuo Yokokawa, Atsuya Uno and Yukio Kaneda
    • Journal Title

      Phys. Rev. Fluids

      Volume: 1 Issue: 8 Pages: 1-9

    • DOI

      10.1103/physrevfluids.1.082403

    • NAID

      120005981191

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] 高レイノルズ数乱流中の渦の組織構造とその時間発展2016

    • Author(s)
      石原卓, 宇野篤也, 森下浩二, 横川三津夫, 金田行雄
    • Journal Title

      ながれ

      Volume: 35 Pages: 109-113

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Accurate Parallel Algorithm for Tracking Inertial Particles in Large-Scale Direct Numerical Simulations of Turbulence2015

    • Author(s)
      T. Ishihara, K. Enohata, K. Morishita, M. Yokokawa, and K. Ishii
    • Journal Title

      Parallel Computing Technologies, LNCS 9251

      Volume: 9251 Pages: 522-527

    • DOI

      10.1007/978-3-319-21909-7_51

    • ISBN
      9783319219080, 9783319219097
    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] 一様等方性乱流の直接数値シミュレーションコードの京コンピュータ向け最適化2014

    • Author(s)
      森下浩二,横川三津夫,宇野篤也,石原卓,金田行雄
    • Journal Title

      研究報告ハイパフォーマンスコンピューティング(HPC)

      Volume: 2014-HPC-147(17) Pages: 1-5

    • NAID

      110009850779

    • Related Report
      2014 Research-status Report
    • Acknowledgement Compliant
  • [Presentation] Vortex Clusters and Their Time Evolution in High-Reynolds-Number Turbulence2016

    • Author(s)
      Ishihara, T., Uno, A., Morishita, K., Yokokawa, M., and Kaneda, Y.
    • Organizer
      APS Division of Fluid Dynamics Meeting
    • Place of Presentation
      Portland, U.S.A.
    • Year and Date
      2016-11-20
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Performance Study on Two-Path Aliasing-Free Calculation of a Spectral DNS Code2016

    • Author(s)
      M. Yokokawa, K. Morishita, A. Uno, T. Ishihara, and Y. Kaneda
    • Organizer
      The 23rd Workshop on Sustained Simulation Performance
    • Place of Presentation
      Tohoku Univ. (Sendai, Miyagi)
    • Year and Date
      2016-03-16
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] 高レイノルズ数乱流中の渦の組織構造とその時間発展2015

    • Author(s)
      石原卓,宇野篤也,森下浩二,横川三津夫,金田行雄
    • Organizer
      第29回数値流体力学シンポジウム
    • Place of Presentation
      九州大学(福岡県・福岡市)
    • Year and Date
      2015-12-15
    • Related Report
      2015 Research-status Report
  • [Presentation] Energy Spectra of Higher Reynolds Number Turbulence by the DNS with up to 12288^3 Grid Points2015

    • Author(s)
      T. Ishihara, Y. Kaneda, K. Morishita, M. Yokokawa, and A. Uno
    • Organizer
      67th Annual Meeting of the APS Division of Fluid Dynamics
    • Place of Presentation
      San Francisco(U.S.A.)
    • Year and Date
      2015-11-23
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Energy Spectrum in High Reynolds Number Turbulence - High Resolution DNS Results2015

    • Author(s)
      K. Morishita, T. Ishihara, Y. Kaneda, M. Yokokawa, and A. Uno
    • Organizer
      67th Annual Meeting of the APS Division of Fluid Dynamics
    • Place of Presentation
      San Francisco(U.S.A.)
    • Year and Date
      2015-11-23
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research

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Published: 2014-04-04   Modified: 2018-03-22  

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