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Analysis of the formation mechanism of the hierarchical flow structure in biofluid mechanics

Research Project

Project/Area Number 26400396
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Mathematical physics/Fundamental condensed matter physics
Research InstitutionHiroshima University

Principal Investigator

Iima Makoto  広島大学, 理学研究科, 准教授 (90312412)

Co-Investigator(Kenkyū-buntansha) 横山 直人  京都大学, 工学研究科, 助教 (80512730)
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2016: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2015: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2014: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Keywords生物対流 / 生物流体力学 / 流れ構造 / 微生物遊泳
Outline of Final Research Achievements

We investigated the relationship between information processing of Euglena and the hierarchical flow structure caused by individuals and their collective motion. A number density flux was suggested proportional to the intensity of the optical gradient. This result was incorporated to construct a model equation of localized bioconvection. This equation reproduces the localized bioconvection as well as the bistability of the state, which is suggested by the experiments. For flapping flight, we developed a method to describe the behavior of separation vortices in a low-dimensional dynamical system by using the single vortex approximation.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (31 results)

All 2017 2016 2015 2014

All Journal Article (11 results) (of which Peer Reviewed: 9 results,  Open Access: 1 results,  Acknowledgement Compliant: 5 results) Presentation (17 results) (of which Int'l Joint Research: 4 results,  Invited: 13 results) Book (2 results) Funded Workshop (1 results)

  • [Journal Article] Statistics and stochastic models of an individual motion of photosensitive alga Euglena gracillis2017

    • Author(s)
      Takuma Ogawa, Shunsuke Izumi, Makoto Iima
    • Journal Title

      Journal of the Physical Society of Japan

      Volume: 印刷中

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Studies of the phase gradient at the boundary of the phase diffusion equation, motivated by peculiar wave patterns of rhythmic contraction in the amoeboid movement of Physarum polycephalum2017

    • Author(s)
      M. Iima, H. Kori and T. Nakagaki
    • Journal Title

      Journal of Physics D: Applied Physics

      Volume: 50 Issue: 15 Pages: 154004-154004

    • DOI

      10.1088/1361-6463/aa6269

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Surface switching statistics of rotating fluid: Disk-rim gap effects2017

    • Author(s)
      Yuji Tasaka and Makoto Iima
    • Journal Title

      Physical Review E

      Volume: 95 Issue: 4 Pages: 043113-043113

    • DOI

      10.1103/physreve.95.043113

    • NAID

      120006309133

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The Flux of Euglena gracilis Cells Depends on the Gradient of Light Intensity2016

    • Author(s)
      T. Ogawa, E. Shoji, N. J. Suematsu, H. Nishimori, S. Izumi, A. Awazu and M. Iima
    • Journal Title

      PLoS ONE

      Volume: 11 Issue: 12 Pages: e0168114-e0168114

    • DOI

      10.1371/journal.pone.0168114

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] ミドリムシ遊泳における方向転換時の鞭毛運動の解析2016

    • Author(s)
      山田稔太,飯間信
    • Journal Title

      日本流体力学会年会2016講演論文集

      Volume: 2016 Pages: 139-139

    • Related Report
      2016 Annual Research Report
  • [Journal Article] ミドリムシ生物対流における局在対流セル間相互作用の解析2016

    • Author(s)
      飯間信,山口崇幸
    • Journal Title

      日本流体力学会年会2016講演論文集

      Volume: 2016 Pages: 63-63

    • Related Report
      2016 Annual Research Report
  • [Journal Article] 二次元流中における非対称剥離渦が物体に及ほす力の解析2015

    • Author(s)
      飯間信
    • Journal Title

      日本流体力学会年会2015講演論文集

      Volume: 2015 Pages: 1-2

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] 流れが駆動する平板のピッチ運動2015

    • Author(s)
      横山直人, 飯間信
    • Journal Title

      日本流体力学会年会2015講演論文集

      Volume: 2015 Pages: 1-2

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] 光強度勾配に比例する走光性をもつ生物対流モデルと局在対流構造2014

    • Author(s)
      飯間 信, 庄司 江梨花, 山口 崇幸, 粟津 暁紀, 泉 俊輔, 西森 拓
    • Journal Title

      日本流体力学会年会2014講演論文集(CD-ROM)

      Volume: 2014

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] 生物対流ハターン形成機構の理解に向けたミドリムシの走光性特性の計測2014

    • Author(s)
      庄司 江梨花, 末松 信彦, 泉 俊輔, 西森 拓, 粟津 暁紀, 飯間 信
    • Journal Title

      日本流体力学会年会2014講演論文集(CD-ROM)

      Volume: 2014

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] 平板のピッチ運動と流れの相互作用2014

    • Author(s)
      横山直人, 飯間信
    • Journal Title

      日本流体力学会年会2014講演論文集(CD-ROM)

      Volume: 2014

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] 遊泳微生物の集団運動が作る生物対流2017

    • Author(s)
      飯間信
    • Organizer
      第21回関西大学先端科学技術シンポジウム
    • Place of Presentation
      大阪
    • Year and Date
      2017-01-19
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Interaction of localized convection cells in the bioconvection of Euglena gracilis2016

    • Author(s)
      M. Iima, T. Yamaguchi
    • Organizer
      69th Annual Meeting of The APS Division of Fluid Dynamics
    • Place of Presentation
      Portland, US
    • Year and Date
      2016-11-20
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Hierarchical structures of the collective motion of a photosensitive microorganism2016

    • Author(s)
      M. Iima
    • Organizer
      Interdisciplinary Applications of Nonlinear Science
    • Place of Presentation
      Kagoshima
    • Year and Date
      2016-11-03
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] ミドリムシ遊泳における方向転換時の鞭毛運動の解析2016

    • Author(s)
      山田稔大, 飯間信
    • Organizer
      流体力学会年会2016
    • Place of Presentation
      名古屋
    • Year and Date
      2016-09-26
    • Related Report
      2016 Annual Research Report
  • [Presentation] 単一渦近似における剥離渦の切り離し基準2016

    • Author(s)
      飯間信
    • Organizer
      日本物理学会第71回年次大会
    • Place of Presentation
      金沢
    • Year and Date
      2016-09-13
    • Related Report
      2016 Annual Research Report
  • [Presentation] Loalized bioconvection patterns: Experiments and Theories2016

    • Author(s)
      M. Iima
    • Organizer
      Patterns and Waves 2016
    • Place of Presentation
      Sapporo
    • Year and Date
      2016-08-01
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Formation of spatially localized bioconvection patterns by suspension of photomovement microorganism, Euglena gracilis.2016

    • Author(s)
      M. Iima
    • Organizer
      Fourth International Conference: Nonlinear Waves -- Theory and Applications
    • Place of Presentation
      Beijing, China
    • Year and Date
      2016-06-25
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Localized Bioconvection2016

    • Author(s)
      M. Iima
    • Organizer
      New Frontiers in Nonlinear Sciences
    • Place of Presentation
      ニセコ
    • Year and Date
      2016-03-06
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] Separation vortices dynamics of the single vortex model2016

    • Author(s)
      M. Iima
    • Organizer
      The second workshop on Applied and Computational Complex Analysis (ACCA-JP/UK)
    • Place of Presentation
      京都
    • Year and Date
      2016-01-18
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] 局在対流のダイナミクス2015

    • Author(s)
      飯間信
    • Organizer
      さきがけ・CREST「数学」領域ワークショップ 探索における収穫と今後の熟成について2015
    • Place of Presentation
      山梨
    • Year and Date
      2015-11-14
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] Analytical Study of the Dynamics of the Separation Vortices from the Body Using Single Vortex Approximation2015

    • Author(s)
      M. Iima
    • Organizer
      8th International Congress on Industrial and Applied Mathematics
    • Place of Presentation
      北京 (中国)
    • Year and Date
      2015-08-10
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] Collective Behavior and Localized Bioconvection Patterns of Euglena Suspension Illuminated from Below2015

    • Author(s)
      M. Iima
    • Organizer
      8th International Congress on Industrial and Applied Mathematics
    • Place of Presentation
      北京 (中国)
    • Year and Date
      2015-08-10
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] ミドリムシ生物対流における局在パターン2015

    • Author(s)
      飯間信
    • Organizer
      エアロ・アクアバイオメカニズム学会第32回定例講演会
    • Place of Presentation
      東京
    • Year and Date
      2015-03-23
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] Analysis of the dynamics of localized convection patterns2014

    • Author(s)
      M. Iima
    • Organizer
      International conference on mathematical fluid dynamics, present and future
    • Place of Presentation
      Tokyo
    • Year and Date
      2014-11-11 – 2014-11-14
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] 光強度勾配に比例する走光性をもつ生物対流モデルと局在対流構造2014

    • Author(s)
      飯間信*, 庄司江梨花, 山口崇幸, 泉俊輔, 粟津暁紀,西森拓
    • Organizer
      流体力学会年会2014
    • Place of Presentation
      仙台
    • Year and Date
      2014-09-15 – 2014-09-17
    • Related Report
      2014 Research-status Report
  • [Presentation] Localized Bioconvection patterns in Euglena gracilis suspensions2014

    • Author(s)
      M. Iima, E. Shoji, A. Awazu, H. Nishimori and S. Izumi
    • Organizer
      the Joint Annual Meeting of the Japanese Society for Mathematical Biology and the Society for Mathematical Biology
    • Place of Presentation
      Osaka
    • Year and Date
      2014-07-28 – 2014-08-01
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] Two types of localized bioconvection patterns in Euglena gracilis suspensions in an annular container2014

    • Author(s)
      M. Iima, E. Shoji, A. Awazu, H. Nishimori and S. Izumi
    • Organizer
      7th World Congress of Biomechanics
    • Place of Presentation
      Boston, USA
    • Year and Date
      2014-07-06 – 2014-07-11
    • Related Report
      2014 Research-status Report
    • Invited
  • [Book] 数理解析研究所講究録「RIMS 共同研究『生物流体における計測問題』」2015

    • Author(s)
      飯間信(編)
    • Total Pages
      113
    • Publisher
      数理解析研究所
    • Related Report
      2015 Research-status Report
  • [Book] 数理解析研究所講究録「RIMS 共同研究『生物流体における流れ構造の解析と役割」2014

    • Author(s)
      飯間信(編)
    • Total Pages
      149
    • Publisher
      京都大学数理解析研究所
    • Related Report
      2014 Research-status Report
  • [Funded Workshop] Workshop on "Aspects of motions in biofluid problems"2015

    • Place of Presentation
      京都
    • Year and Date
      2015-10-26
    • Related Report
      2015 Research-status Report

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Published: 2014-04-04   Modified: 2018-03-22  

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