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Functional analysis of candidate brain cancer-causing genes that were identified by transposon mutagenesis

Research Project

Project/Area Number 26430108
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Tumor biology
Research InstitutionThe University of Tokyo

Principal Investigator

Koso Hideto  東京大学, 医科学研究所, 特任講師 (50612876)

Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2016: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2015: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2014: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywordsミュータジェネシス / トランスポゾン / グリオーマ / グリオブラストーマ / がん抑制遺伝子 / LARP4B / 脳腫瘍 / 小脳髄芽腫 / マウスモデル
Outline of Final Research Achievements

Transposon-based insertional mutagenesis provides a method for an unbiased forward genetic screen for cancer genes in mice. Using this system, we identified an RNA-binding protein, La-related protein 4b (LARP4B), as a candidate cancer gene for GBM. The patterns of transposon insertions predict that Larp4b has a tumor suppressor function. LARP4B expression was consistently decreased in human GBM cell lines. Moreover, heterozygous deletion of LARP4B was detected in nearly 80% of GBMs in TCGA database. LARP4B loss resulted in low expression levels, and was associated with poor patient survival. LARP4B transduction into GBM cell lines strongly inhibited proliferation. Loss of function of Larp4b in mouse primary astrocytes promoted proliferation and led to tumor formation in combination with deficiency of p53 and Nf1. Taken together, these data provide strong evidence that LARP4B serves as a tumor suppressor gene in GBM.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (14 results)

All 2017 2016 2015 2014

All Journal Article (7 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 7 results,  Open Access: 2 results,  Acknowledgement Compliant: 3 results) Presentation (7 results)

  • [Journal Article] Forkhead box protein P1 is essential for lens epithelium transition to the fiber cells during development but does not play roles for retinal development.2017

    • Author(s)
      Suzuki-Kerr H, Baba Y, Tsuhako A, Koso H, Dekker JD, Tucker H, Kuribayashi H, Watanabe S.
    • Journal Title

      Invest. Ophthalmol. Vis. Sci.

      Volume: 58 Issue: 4 Pages: 1916-1929

    • DOI

      10.1167/iovs.16-20085

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Role of transcription factor Tgif2 in photoreceptor differentiation in the mouse retina.2016

    • Author(s)
      Kuribayashi H, Tsuhako A, Kikuchi M, Yoshida N, Koso H, Watanabe S.
    • Journal Title

      Experimental Eye Research

      Volume: 152 Pages: 34-42

    • DOI

      10.1016/j.exer.2016.09.005

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Conditional rod photoreceptor ablation reveals Sall1 as a microglial marker and regulator of microglial morphology in the retina.2016

    • Author(s)
      Koso H, Tsuhako A, Lai CY, Baba Y, Otsu M, Ueno K, Nagasaki M, Suzuki Y, Watanabe S.
    • Journal Title

      Glia

      Volume: 64 Issue: 11 Pages: 2005-2024

    • DOI

      10.1002/glia.23038

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Identification of RNA-binding protein LARP4B as a tumor suppressor in glioma2016

    • Author(s)
      Koso H, Yi H, Sheridan P, Miyano S, Ino Y, Todo T, Watanabe S.
    • Journal Title

      Cancer Research

      Volume: 76 Issue: 8 Pages: 2254

    • DOI

      10.1158/0008-5472.can-15-2308

    • URL

      https://pure.teikyo.jp/en/publications/d20fb61e-58eb-46e9-8445-90d64c9465a6

    • Related Report
      2016 Annual Research Report 2015 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Expression pattern of Ccr2 and Cx3cr1 in inherited retinal degeneration.2015

    • Author(s)
      Kohno H, Koso H, Okano K, Sundermeier TR, Saito S, Watanabe S, Tsuneoka H, Sakai T.
    • Journal Title

      Journal of Neuroinflammation

      Volume: 12 Issue: 1 Pages: 188-188

    • DOI

      10.1186/s12974-015-0408-3

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Transposon mutagenesis identifies genes and evolutionary forces driving gastrointestinal tract tumor progression.2015

    • Author(s)
      Takeda H, Wei Z, Koso H, Rust AG, Yew CC, Mann MB, Ward JM, Adams DJ, Copeland NG, Jenkins NA.
    • Journal Title

      Nature Genetics

      Volume: 47 Issue: 2 Pages: 142-150

    • DOI

      10.1038/ng.3175

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Identification of FoxR2 as an oncogene in medulloblastoma2014

    • Author(s)
      Koso H, Tsuhako A, Lyons E, Ward JM, Rust AG, Adams DJ, Jenkins NA, Copeland NG, Watanabe S
    • Journal Title

      Cancer Research

      Volume: 74 (8) Issue: 8 Pages: 2351-61

    • DOI

      10.1158/0008-5472.can-13-1523

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] マウス神経系における細胞競合の検討2017

    • Author(s)
      高祖秀登
    • Organizer
      細胞競合・ダイイングコード 合同若手ワークショップ
    • Place of Presentation
      大坂
    • Related Report
      2016 Annual Research Report
  • [Presentation] Cancer Gene Discovery Using Transposon-based Insertional Mutagenesis2017

    • Author(s)
      高祖秀登
    • Organizer
      Advanced Genome Science International Symposium
    • Place of Presentation
      東京
    • Related Report
      2016 Annual Research Report
  • [Presentation] Identification of RNA-binding protein LARP4B as a tumor suppressor gene in glioma2016

    • Author(s)
      高祖秀登
    • Organizer
      細胞競合コロキウム
    • Place of Presentation
      定山渓ビューホテル(北海道 札幌市)
    • Year and Date
      2016-03-18
    • Related Report
      2015 Research-status Report
  • [Presentation] グリオーマにおける新規がん抑制遺伝子LARP4Bの同定2016

    • Author(s)
      高祖秀登
    • Organizer
      癌学会
    • Place of Presentation
      横浜
    • Related Report
      2016 Annual Research Report
  • [Presentation] 誘導型杆体視細胞変性モデルマウスの作成と解析2015

    • Author(s)
      高祖 秀登、津波古あさの、頼貞儀、馬場行広、大津真、植野和子、長﨑正朗、鈴木穰、渡邉すみ子
    • Organizer
      Retina Research Meeting
    • Place of Presentation
      JPタワー(東京都 千代田区)
    • Year and Date
      2015-10-31
    • Related Report
      2015 Research-status Report
  • [Presentation] Transposon mutagenesis identifies genes that transform neural stem cells into cancer-initiating cells2015

    • Author(s)
      Hideto Koso
    • Organizer
      1st International Symposium on Cell Competition
    • Place of Presentation
      京都大学(京都府 京都市)
    • Year and Date
      2015-09-10
    • Related Report
      2015 Research-status Report
  • [Presentation] トランスポゾン・ミュータジェネシスによる小脳髄芽腫の新規原因遺伝子の同定2014

    • Author(s)
      高祖秀登
    • Organizer
      第73回日本癌学会学術総会
    • Place of Presentation
      パシフィコ横浜
    • Year and Date
      2014-09-26
    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2018-03-22  

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