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Histone chaperone regulates higher order chromatin structure

Research Project

Project/Area Number 26440001
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Molecular biology
Research InstitutionHokkaido University

Principal Investigator

Takahata Shinya  北海道大学, 理学研究院, 助教 (50381588)

Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2016: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2015: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2014: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
KeywordsPdr1 / FACT / HP1 / Spt16 / Pob3 / Swi6 / Histone / H3K9me / Nuclear Receptor / ヘテロクロマチン / ヒストン / ヒストンシャペロン / クロマチン / クロマチンリモデリング
Outline of Final Research Achievements

Histone chaperones cooperatively function for chromatin structure regulation. In this project, we have clarified the mechanism of chromatin regulation by FACT complex. From proteomics analysis,Pdr1, HP1, and Fip1 were identified as FACT associating factors, and chromatin structural changes caused by conjugation with FACT were analyzed. As Pdr1 is a transcription factor that activates the xenobiotics elimination system, it became clear that this activator for the efflux pump system transiently evicts the nucleosome from the promoter chromatin, and reorganizes chromatin structure via FACT.
HP1 (Heterochromatin Protein 1) is known as a platform of heterochromatin forming factors. Our analysis revealed that it stabilizes the nucleosome octamer through the physical interaction with FACT complex at histone H3K9 methylated loci.
Fip1 analysis is currently underway. Our data related to chromatin silencing was obtained near the boundary of CnpA / H3 at the pericentromeric heterochromatin.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (14 results)

All 2017 2016 2015 2014

All Journal Article (6 results) (of which Peer Reviewed: 6 results,  Acknowledgement Compliant: 3 results,  Open Access: 4 results) Presentation (8 results) (of which Int'l Joint Research: 3 results,  Invited: 1 results)

  • [Journal Article] H3K36 methylation state and associated silencing mechanisms.2017

    • Author(s)
      Suzuki S, Murakami Y, Takahata S.
    • Journal Title

      Transcription

      Volume: 8 Issue: 1 Pages: 26-31

    • DOI

      10.1080/21541264.2016.1246076

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Inner nuclear membrane protein Lem2 augments heterochromatin formation in response to nutritional conditions.2016

    • Author(s)
      Tange Y, Chikashige Y, Takahata S, Kawakami K, Higashi M, Mori C, Kojidani T, Hirano Y, Asakawa H, Murakami Y, Haraguchi T, Hiraoka Y.
    • Journal Title

      Genes to Cells

      Volume: 21 Issue: 8 Pages: 812-832

    • DOI

      10.1111/gtc.12385

    • NAID

      120005906898

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Histone H3K36 trimethylation is essential for multiple silencing mechanism in fission yeast.2016

    • Author(s)
      Shota Suzuki, Hiroaki Kato, Yutaka Suzuki, Yuji Chikashige, Yasushi Hiraoka, Hiroshi Kimura, Koji Nagao, Chikashi Obuse, Shinya Takahata and Yota Murakami
    • Journal Title

      Nucleic Acids Research

      Volume: 44 (9) Issue: 9 Pages: 4147-4162

    • DOI

      10.1093/nar/gkw008

    • NAID

      120005819302

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Histone H3K36 trimethylation is essential for multiple silencing mechanisms in fission yeast.2016

    • Author(s)
      Suzuki S, Kato H, Suzuki Y, Chikashige Y, Hiraoka Y, Kimura H, Nagao K, Obuse C, Takahata S, Murakami Y
    • Journal Title

      Nucleic Acids Res.

      Volume: gkw008

    • NAID

      120005819302

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] A role for FACT in repopulation of nucleosomes at inducible genes.2014

    • Author(s)
      Voth WP, Takahata S, Nishikawa JL, Metcalfe BM, Naar AM, Stillman DJ
    • Journal Title

      PLoS One

      Volume: 9(1)

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] A novel method for purification of the endogenously expressed fission yeast Set2 complex.2014

    • Author(s)
      Suzuki S, Nagao K, Obuse C, Murakami Y, Takahata S
    • Journal Title

      Protein Expr Purif

      Volume: 97 Pages: 44-49

    • NAID

      120005438258

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] HP1 and FACT cooperatively regulate global gene expression2016

    • Author(s)
      Shinya Takahata, Shota Suzuki, Aoi Ohnuma, Saori Chida, Koji Nagao, Chikashi Obuse, Yota Murakami
    • Organizer
      The International Conference on Transcription Cycle 2016
    • Place of Presentation
      東京大学理学部小柴ホール(東京都文京区本郷)
    • Year and Date
      2016-12-03
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] H3K9me非依存的に働くヘテロクロマチンタンパク質HP1/Swi6の解析2016

    • Author(s)
      高畑信也、鈴木詔大、村上洋太
    • Organizer
      転写サイクル班会議2016
    • Place of Presentation
      松島一の坊(宮城県宮城郡松島町)
    • Year and Date
      2016-09-05
    • Related Report
      2016 Annual Research Report
  • [Presentation] 分裂酵母におけるH3K36メチル化酵素Set2依存的サイレンシング機構に関する研究2016

    • Author(s)
      鈴木詔大、加藤太陽、高畑信也、村上洋太
    • Organizer
      転写サイクル班会議2016
    • Place of Presentation
      松島一の坊(宮城県宮城郡松島町)
    • Year and Date
      2016-09-05
    • Related Report
      2016 Annual Research Report
  • [Presentation] ヘテロクロマチンタンパク質HP1と結合するFACTの相互作用領域の解析2015

    • Author(s)
      Shinya Takahata, Aoi Ohnuma, Yota Muarakami
    • Organizer
      第38回日本分子生物学会
    • Place of Presentation
      ポートアイランド(兵庫県神戸市)
    • Year and Date
      2015-12-01
    • Related Report
      2015 Research-status Report
  • [Presentation] Roles of FACT for Heterochromatic Silencing in Fission Yeast2015

    • Author(s)
      Shinya Takahata, Saori Chida, Aoi Ohnuma, Yota Murakami
    • Organizer
      The 40th Naito Conference Epigenetics
    • Place of Presentation
      シャトレーゼガトーキングダム(北海道札幌市)
    • Year and Date
      2015-09-15
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] HP1/Swi6 recruits FACT for heterochromatin regulation in fission yeast2015

    • Author(s)
      Shinya Takahata, Saori Chida, Yota Muarakami
    • Organizer
      The 8th International Fission Yeast Meeting
    • Place of Presentation
      生田神社(兵庫県神戸市)
    • Year and Date
      2015-06-21
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] 高畑信也、千田早織、村上洋太2015

    • Author(s)
      FACT複合体によるクロマチンサイレンシングの分子機構
    • Organizer
      転写サイクル冬の若手ワークショップ
    • Place of Presentation
      伊香保温泉松本楼(群馬県渋川市)
    • Year and Date
      2015-02-05 – 2015-02-07
    • Related Report
      2014 Research-status Report
  • [Presentation] FACT複合体によるクロマチンサイレンシングの分子機構2014

    • Author(s)
      高畑信也、千田早織、村上洋太
    • Organizer
      第32回染色体ワークショップ/第13回核ダイナミクス研究会 合同開催
    • Place of Presentation
      安芸グランドホテル(広島県廿日市)
    • Year and Date
      2014-12-15 – 2014-12-17
    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2018-03-22  

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