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Recognition of ribosomes damaged by vero-toxin

Research Project

Project/Area Number 26440004
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Molecular biology
Research InstitutionKyoto University

Principal Investigator

Kitabatake Makoto  京都大学, ウイルス・再生医科学研究所, 助教 (10321754)

Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2016: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2015: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2014: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Keywordsリボソーム / 品質管理 / ユビキチン / RNA / ベロ毒素
Outline of Final Research Achievements

To understand the fate of nonfunctional ribosomal RNAs damaged by Vero-toxin, we created a mutant 25S rRNA which has a point mutation in the Vero-toxin target site. In a S. cerevisiae model strain, this mutant RNA was degraded by Mms1-dependent pathway. We identified novel factors related to this pathway. We found that one factor is physically associating to Mms1 complex (E3 ligase) and the ribosomes, indicating that this will be a bridge protein between the two complex. The other factor we newly identified was a kinase. We revealed that the active site mutation of this kinase completely abrogated the degradation of the mutant RNA, showing that the signal transduction system is involved in the elimination of nonfunctional ribosomes. Taken together, a series of experiments shed light on these unappreciated factors involved in this pathway.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (8 results)

All 2016 2015

All Journal Article (1 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results,  Acknowledgement Compliant: 1 results) Presentation (7 results) (of which Int'l Joint Research: 2 results,  Invited: 2 results)

  • [Journal Article] Crt10 directs the cullin-E3 ligase Rtt101 to nonfunctional 25S rRNA decay2015

    • Author(s)
      Sakata T, Fujii K, Ohno M, Kitabatake M
    • Journal Title

      Biochem. Biophys. Res. Commu

      Volume: 457 Issue: 1 Pages: 90-4

    • DOI

      10.1016/j.bbrc.2014.12.072

    • NAID

      120005567895

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] 真核生物リボソームの品質管理に関わる新たな因子2016

    • Author(s)
      北畠真、坂田知子、大野睦人
    • Organizer
      第4回リボソームミーティング
    • Place of Presentation
      大阪医科大学 看護学部講堂
    • Year and Date
      2016-09-17
    • Related Report
      2016 Annual Research Report
  • [Presentation] “A bridge that links an E3 ubiquitin ligase complex and nonfunctional 60S ribosomal particles.”2016

    • Author(s)
      Makoto Kitabatake, Tomoko Sakata, Mutsuhito Ohno
    • Organizer
      RNA society meeting 2016
    • Place of Presentation
      the International Conference Center in Kyoto
    • Year and Date
      2016-06-28
    • Related Report
      2016 Annual Research Report
  • [Presentation] A bridge that links an E3 ubiquitin ligase complex and nonfunctional 60S ribosomal particles2016

    • Author(s)
      Makoto Kitabatake, Tomoko Sakata, Mutsuhito Ohno
    • Organizer
      RNA2016
    • Place of Presentation
      京都国際会議場
    • Year and Date
      2016-06-28
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Quality Control of Eukaryotic Ribosomes2016

    • Author(s)
      Makoto Kitabatake, Tomoko Sakata, Mutsuhito Ohno
    • Organizer
      The 18th Tokyo RNA Club ― Ribosome and Translational Apparatus
    • Place of Presentation
      武田ホール、東京大学
    • Year and Date
      2016-01-14
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] Selective ubiquitination and degradation of defective 60S particles2016

    • Author(s)
      Makoto Kitabatake, Tomoko Sakata, Mutsuhito Ohno
    • Organizer
      RNA2016 Satellite-symposium “Nascent biology and Ribosome functions"
    • Place of Presentation
      Inamori Hall, Kyoto University
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Crt10 directs the cullin-E3 ligase Rtt101 to nonfunctional 25S rRNA decay2015

    • Author(s)
      Makoto Kitabatake, Tomoko Sakata, Kotaro Fujii and Mutsuhito Ohno
    • Organizer
      10th EMBO Conf on Ribosome Synthesis
    • Place of Presentation
      Brussels, Belgium
    • Year and Date
      2015-08-19
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] 真核生物60Sリボソームの品質管理とストレス応答経路との関わり2015

    • Author(s)
      北畠真、坂田知子、藤井耕太郎、大野睦人
    • Organizer
      第3回リボソームミーティング
    • Place of Presentation
      ANAホリデイ・イン リゾート宮崎
    • Year and Date
      2015-03-17 – 2015-03-18
    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2018-03-22  

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