• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Analysis on molecular mechanism of protein transport to peroxisomes

Research Project

Project/Area Number 26440157
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Plant molecular biology/Plant physiology
Research InstitutionNational Institute for Basic Biology

Principal Investigator

Mano Shoji  基礎生物学研究所, 多様性生物学研究室, 准教授 (20321606)

Co-Investigator(Renkei-kenkyūsha) NISHIMURA MIKIO  基礎生物学研究所, 名誉教授 (80093061)
KANAI MASATAKE  基礎生物学研究所, 多様性生物学研究室, NIBBリサーチフェロー (30611488)
OIKAWA KAZUSATO  理化学研究所, 環境資源科学研究センター, 研究員 (70508457)
KAMIGAKI AKANE  基礎生物学研究所, 多様性生物学研究室, 特別協力研究員 (30399315)
Research Collaborator KONDO MAKI  
GOTO SHINO  
HIKINO KAZUMI  
NAGATA KYOKO  
YAMAGUCHI CHINAMI  
NAKAGAWA TSUYOSHI  
KOUCHI TAKAYUKI  
NISHIHAMA RYUICHI  
YAMATO KATSUYUKI  
Project Period (FY) 2014-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2016: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2015: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2014: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywordsペルオキシソーム / シロイヌナズナ / apem変異体 / タンパク質輸送 / Peroxin (PEX) / GFP / オルガネラ / ゼニゴケ / Peroxin / ユビキチン / タンパク質間相互作用 / タンパク質相互作用
Outline of Final Research Achievements

From imaging analysis using transgenic Marchantia polymorpha expressing PTS1 (Peroxisome targeting signal 1)- or PTS2-Citrine and immunoelectron microscopic analysis revealed the presence of PTS1- and PTS2-dependent protein transport in M. polymorpha. Bioinformatics analysis identified the orthologous genes in M. polymporpha genome. Using this information, we succeeded in generation of some mutants whose peroxisomal genes were disrupted by the CRISPR/Cas9 method. In addition, we generated the Gateway technology-compatible binary vectors, and these vectors functioned in M. polymorpha cells.
From the analysis of one of Arabidopsis apem (aberrant peroxisome morphology), the ubiquitin signaling pathway is involved in protein transport to peroxisomes, and that the defective of ubiquitin-dependent protein transport causes normal peroxisome functions, such as lipid metabolism and photorespiration.

Report

(5 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (36 results)

All 2017 2016 2015 2014 Other

All Journal Article (18 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 17 results,  Open Access: 11 results,  Acknowledgement Compliant: 4 results) Presentation (15 results) (of which Int'l Joint Research: 4 results,  Invited: 7 results) Book (1 results) Remarks (2 results)

  • [Journal Article] A dual-site gateway cloning system for simultaneous cloning of two genes for plant transformation.2017

    • Author(s)
      Aboulela, M., Tanaka, Y., Nishimura, K., Mano, S., Kimura, T., and Nakagawa, T.
    • Journal Title

      Plasmid

      Volume: 92 Pages: 1-11

    • DOI

      10.1016/j.plasmid.2017.05.001

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Development of an R4 dual-site (R4DS) gateway cloning system enabling the efficient simultaneous cloning of two desired sets of promoters and open reading frames in a binary vector for plant research.2017

    • Author(s)
      Aboulela, M., Tanaka, Y., Nishimura, K., Mano, S., Nishimura, M., Ishiguro, S., Kimura, T., and Nakagawa, T.
    • Journal Title

      PLoS One

      Volume: 12 Issue: 5 Pages: 177889-177901

    • DOI

      10.1371/journal.pone.0177889

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] An efficient method for the isolation of highly purified RNA from seeds for use in quantitative transcriptome analysis.2017

    • Author(s)
      Kanai, M., Mano, S., and Nishimura, M.
    • Journal Title

      J. Vis. Exp.

      Volume: 119 Issue: 119

    • DOI

      10.3791/55008

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Analysis of physical interaction between peroxisomes and chloroplast induced by dynamic morphological changes of peroxisomes using femtosecond laser impulsive force2016

    • Author(s)
      Oikawa, K., Mano, S., Hosokawa, Y, and Nishimura, M.
    • Journal Title

      Plant Morphol.

      Volume: 28 Pages: 29-34

    • NAID

      130006904146

    • Related Report
      2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] Sucrose production mediated by lipid metabolism suppresses physiological interaction of peroxisomes and oil bodies during germination of Arabidopsis thaliana.2016

    • Author(s)
      Cui, S., Hayashi, Y., Otomo, M., Mano, S., Oikawa, K., Hayashi, M. and Nishimura, M.
    • Journal Title

      J. Biol. Chem.

      Volume: 291 Issue: 38 Pages: 19734-19745

    • DOI

      10.1074/jbc.m116.748814

    • Related Report
      2016 Research-status Report
    • Peer Reviewed
  • [Journal Article] Gateway Vectors for Simultaneous Detection of Multiple Protein-Protein Interactions in Plant Cells Using Bimolecular Fluorescence Complementation2016

    • Author(s)
      Kamigaki A, Nito K, Hikino K, Goto-Yamada S, Nishimura M, Nakagawa T, Mano S
    • Journal Title

      PLoS One

      Volume: 11 Issue: 8 Pages: e0160717-e0160717

    • DOI

      10.1371/journal.pone.0160717

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Quantification of the adhesion strength between peroxisomes and chloroplasts by femtosecond laser technology2016

    • Author(s)
      Hosokawa, Y., Iino, T., Oikawa, K., Mano, S., Yamada, K., and Nishimura, M.
    • Journal Title

      Bio-Protoc.

      Volume: 6 Issue: 11

    • DOI

      10.21769/bioprotoc.1834

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Measuring the interactions between peroxisomes and chloroplasts by in situ laser analysis2016

    • Author(s)
      Oikawa, K., Mano, S., Yamada, K., Hosokawa, Y., and Nishimura, M.
    • Journal Title

      Bio-Protoc.

      Volume: 6 Issue: 8

    • DOI

      10.21769/bioprotoc.1790

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Quantifying morphological features of actin cytoskeletal filaments in plant cells based on mathematical morphology.2016

    • Author(s)
      Kimori. Y., K. Hikino, M. Nishimura and S. Mano
    • Journal Title

      J. Theor. Biol.

      Volume: 389 Pages: 123-131

    • DOI

      10.1016/j.jtbi.2015.10.031

    • Related Report
      2016 Research-status Report 2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Phosphorylation of the C Terminus of RHD3 Has a Critical Role in Homotypic ER Membrane Fusion in Arabidopsis.2016

    • Author(s)
      Ueda, H., Yokota, E., Kuwata, K., Kutsuna, N., Mano, S., Shimada, T., Tamura, K., Stefano, G., Fukao, Y., Brandizzi, F., Shimmen, T., Nishimura, M., Hara-Nishimura, I.
    • Journal Title

      Plant Physiol.

      Volume: 170 Issue: 2 Pages: 867-880

    • DOI

      10.1104/pp.15.01172

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Extension of oil biosynthesis during the mid-phase of seed development enhances oil content in Arabidopsis seeds.2016

    • Author(s)
      Kanai, M., Mano, S., Kondo, M., Hayashi, M., and Nishimura, M.
    • Journal Title

      Plant Biotechnology Journal

      Volume: 14 Issue: 5 Pages: 1241-1250

    • DOI

      10.1111/pbi.12489

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Dynamics of the light-dependent transition of plant peroxisomes.2015

    • Author(s)
      Goto-Yamada, S., Mano, S., Yamada, K., Oikawa, K., Hosokawa, Y., Hara-Nishimura, I., and Nishimura, M.
    • Journal Title

      Plant and Cell Physiology

      Volume: 56 Issue: 7 Pages: 1252-1263

    • DOI

      10.1093/pcp/pcv081

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Physical interaction between peroxisomes and chloroplasts elucidated by in situ laser analysis2015

    • Author(s)
      Kazusato Oikawa, Shigeru Matsunaga, Shoji Mano, Maki Kondo, Kenji Yamada, Makoto Hayashi, Takatoshi Kagawa, Akeo Kadota, Wataru Sakamoto, Shoichi Higashi, Masakatsu Watanabe, Toshiaki Mitsui, Akinori Shigemasa, Takanori Iino, Yoichiroh Hosokawa & Mikio Nishimura
    • Journal Title

      Nature Plants

      Volume: 1 Issue: 4 Pages: 15035-15035

    • DOI

      10.1038/nplants.2015.35

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] The Plant Organelles Database 3 (PODB3) update 2014: integrating electron micrographs and new options for plant organelle research.2014

    • Author(s)
      Mano S, Nakamura T, Kondo M, Miwa T, Nishikawa S, Mimura T, Nagatani A, Nishimura M.
    • Journal Title

      Plant Cell Physiol.

      Volume: 55 Issue: 1 Pages: e1-e1

    • DOI

      10.1093/pcp/pct140

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Chaperone and Protease Functions of LON Protease 2 Modulate the Peroxisomal Transition and Degradation with Autophagy.2014

    • Author(s)
      Goto-Yamada S, Mano S, Nakamori C, Kondo M, Yamawaki R, Kato A, Nishimura M.
    • Journal Title

      Plant Cell Physiol.

      Volume: 55 Issue: 3 Pages: 482-96

    • DOI

      10.1093/pcp/pcu017

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] ER bodies in plants of the Brassicales order: Biogenesis and association with innate immunity.2014

    • Author(s)
      Nakano, RT., K. Yamada, P. Bednarek, M. Nishimura and I. Hara-Nishimura
    • Journal Title

      Frontiers in Plant Science

      Volume: 5 Issue: 5 Pages: 1-17

    • DOI

      10.4161/auto.28529

    • NAID

      120005439544

    • Related Report
      2014 Research-status Report
  • [Journal Article] nteraction between chaperone and protease functions of LON2, and autophagy during the functional transition of peroxisomes.2014

    • Author(s)
      Goto-Yamada, S., Mano, S., and Nishimura, M.
    • Journal Title

      Plant and Signaling Behavior

      Volume: 9

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Measurement of the number of peroxisomes.2014

    • Author(s)
      Shibata, M., Oikawa, K., Mano, S., and Nishimura, M.
    • Journal Title

      Bio-Protocol

      Volume: 4

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] ゼニゴケにおけるプロモータースワップ用Gateway ベクター R4pMpGWB,およびプロモーター解析用Gateway ベクターR4L1pMpGWB の開発2017

    • Author(s)
      真野昌二、西浜竜一、石田咲子、曳野和美、近藤真紀、西村幹夫、大和勝幸、河内孝之、中川強
    • Organizer
      第58回日本植物生理学会年会
    • Place of Presentation
      鹿児島大学(鹿児島県鹿児島市)
    • Year and Date
      2017-03-16
    • Related Report
      2016 Research-status Report
  • [Presentation] ペルオキシソーム形成に関わる新規因子APEM6の局在とその機能2017

    • Author(s)
      神垣あかね、真野昌二、西村幹夫
    • Organizer
      第58回日本植物生理学会年会
    • Place of Presentation
      鹿児島大学(鹿児島県鹿児島市)
    • Year and Date
      2017-03-16
    • Related Report
      2016 Research-status Report
  • [Presentation] Identification and characterization of molecular players for peroxisome biogenesis and functions based on imaging-based approach.2017

    • Author(s)
      Mano, S., Goto-Yamada, S., Oikawa, K., and Nishimura, M.
    • Organizer
      Taiwan-Japan Plant Biology 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 植物の高次機能を支えるペルオキシソーム機能発現と形成機構2017

    • Author(s)
      真野昌二、及川和聡、後藤-山田志野、Cui Songkui、林誠、西村幹夫
    • Organizer
      ConBio2017
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Development of two Gateway binary vector series for the assembly of three DNA fragments and promoter analysis in Marchantia polymorpha2017

    • Author(s)
      Mano, S., Nishihama, R., Ishida, S., Kazumi, H., Kondo, M., Yamato, K., Kohchi, T., and Nakagawa, T.
    • Organizer
      The 65th NIBB Conference Marchantia Workshop 2017 Renaissance of Marchantia polymorpha - the genome and beyond
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] イメージング技術を用いた植物ペルオキシソーム研究2017

    • Author(s)
      真野昌二
    • Organizer
      第1回プラントバイオイメージング研究会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] Roles of LON protease and autophagy in the peroxisome quality control.2017

    • Author(s)
      Goto-Yamada, S., Mano, S., Oikawa, K., and Nishimura, M.
    • Organizer
      EUROBIOTEC 2017 EXPO
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] What are roles of peroxisomes in plant reproduction?2016

    • Author(s)
      Mano, S., Hikino, K., Kato, K., and Goto-Yamada, S.
    • Organizer
      日本動物学会第87回沖縄大会2016
    • Place of Presentation
      沖縄コンベンションセンター(沖縄県宜野湾市)
    • Year and Date
      2016-11-17
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Dynamics of peroxisomes and oil bodies based on imaging approach: Molecular players, mechanisms, and roles in metabolisms2016

    • Author(s)
      Mano, S., Oikawa, K., Goto-Yamada, S., Shibata, M., Cui, S., Hayashi, M., and Nishimura, M.
    • Organizer
      第57回日本植物生理学会年会
    • Place of Presentation
      岩手大学(岩手県・盛岡市)
    • Year and Date
      2016-03-18
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] Chaperone and protease functions of LON protease 2 modulate the peroxisomal transition and degradation with autophagy2016

    • Author(s)
      Goto-Yamada, S., Mano, S., Nakamori, C., Kondo, M., Yamawaki, R, Kato, A., and Nishimura, M.
    • Organizer
      第57回日本植物生理学会年会
    • Place of Presentation
      岩手大学(岩手県・盛岡市)
    • Year and Date
      2016-03-18
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] 受精を支える植物ペルオキシソームの形成と機能の意義2015

    • Author(s)
      真野昌二、山口千波、曳野和美、加藤恭子、西村幹夫
    • Organizer
      BMB2015
    • Place of Presentation
      神戸ポートアイランド(兵庫県・神戸市)
    • Year and Date
      2015-12-01
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] 形態変化を伴ったオルガネラ間相互作用の解析~オルガネラ間接着力測定の試み~2015

    • Author(s)
      及川和聡、真野昌二、近藤真紀、坂本亘、三ツ井敏明、飯野敬矩、細川陽一郎、西村幹夫
    • Organizer
      日本植物学会第79回大会シンポジウム
    • Place of Presentation
      朱鷺メッセ(新潟県・新潟市)
    • Year and Date
      2015-09-06
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] ペルオキシソーム形成に関わる新規因子APEM6の解析2015

    • Author(s)
      神垣あかね、真野昌二、西村幹夫
    • Organizer
      第56回日本植物生理学会年会
    • Place of Presentation
      東京農業大学(東京都)
    • Year and Date
      2015-03-16 – 2015-03-18
    • Related Report
      2014 Research-status Report
  • [Presentation] Photosynthesis-dependent physical interaction between peroxisomes and chloroplasts elucidated by in situ laser analysis2015

    • Author(s)
      Oikawa, K., Matsunaga, S., Mano, S., Kondo, M., Hayashi, M., Sakamoto, W., Mitsui, T., Iino, T., Hosokawa, Y., and Nishimura, M.
    • Organizer
      The 2nd International Symposium on Plant Environmental Sensing
    • Place of Presentation
      東京農業大学(東京都)
    • Year and Date
      2015-03-13 – 2015-03-15
    • Related Report
      2014 Research-status Report
  • [Presentation] 植物ペルオキシソームの機能転換におけるプロテアーゼ、シャペロン、オートファジーの協調的作用2014

    • Author(s)
      後藤(山田)志野、真野 昌二、中森 ちひろ、近藤 真紀、山脇 隆一、加藤 朗、西村 いくこ、西村 幹夫
    • Organizer
      第37回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(横浜)
    • Year and Date
      2014-11-25 – 2014-11-27
    • Related Report
      2014 Research-status Report
  • [Book] Sexual reproduction in animals and plants2014

    • Author(s)
      Goto-Yamada, S., Mano, S., and Nishimura, M.
    • Total Pages
      480
    • Publisher
      Springer Japan
    • Related Report
      2014 Research-status Report
  • [Remarks] 真野グループ 研究業績

    • URL

      http://www.nibb.ac.jp/plantorganelles/paper.html

    • Related Report
      2016 Research-status Report
  • [Remarks] 研究業績

    • URL

      http://www.nibb.ac.jp/plantorganelles/paper.html

    • Related Report
      2015 Research-status Report

URL: 

Published: 2014-04-04   Modified: 2019-03-29  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi