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Comprehensive search and evolutionary analysis of bacterial transferred genes in various aphid species

Research Project

Project/Area Number 26440196
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Evolutionary biology
Research InstitutionToyohashi University of Technology

Principal Investigator

Okamura Keiko  豊橋技術科学大学, エレクトロニクス先端融合研究所, 研究員 (10570533)

Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2016: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2015: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2014: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywordsアブラムシ / 菌細胞 / 相利共生 / 遺伝子水平転移 / オーソログ遺伝子 / 分子系統解析
Outline of Final Research Achievements

The evolutionary dynamics of bacterial transferred genes, which was found from the genome of Acyrthosiphon pisum, was examined. Degenerate primers were designed from LdcA1 gene originated from A. pisum and its orthologous genes, and the degenerate PCR was performed by using the genomic DNAs of 90 aphid species as templates, and the PCR products were all sequenced. From 24 species of aphids Aphidini and Macrosiphini, LdcA1 genes, which were highly homologous to A. pisum LdcA1 gene were found. The phylogenetic analysis of the deduced amino acid sequences of LdcA1 genes acquired from these 24 aphid species showed that the phylogenetic relationship of LdcA1 genes roughly reflected the present taxonomic status of these aphid species, suggesting that the LdcA1 genes were horizontally transferred to a common ancestor of these aphid groups and evolved together with speciation of these aphids groups.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (6 results)

All 2017 2016 2015 2014

All Journal Article (2 results) (of which Peer Reviewed: 2 results,  Open Access: 2 results) Presentation (4 results)

  • [Journal Article] Proposal of Rhodoplanes tepidamans sp. nov. to accommodate the thermotolerant phototrophic bacterium previously referred to as "Rhodoplanes (Rhodopseudomonas) cryptolactis".2017

    • Author(s)
      Hiraishi, A., and Okamura, K.
    • Journal Title

      International Journal of Systematic and Evolutionally Microbiology

      Volume: 印刷中 Issue: 5 Pages: 1540-1545

    • DOI

      10.1099/ijsem.0.001752

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Acidiphilium iwatense sp. nov., isolated from an acid mine drainage treatment plant, and emendation of the genus Acidiphilium.2015

    • Author(s)
      Keiko Okamura, Akiko Kawai, Norio Wakao, Takeshi Yamada, Akira Hiraishi
    • Journal Title

      International journal of systematic and evolutionary microbiology

      Volume: 65 Issue: Pt_1 Pages: 42-48

    • DOI

      10.1099/ijs.0.065052-0

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] ミカンキジラミ共生細菌から得た新規ポリケチド「ディアフォリン」の活性評価2016

    • Author(s)
      山田倫子、潰回雅東、杉野明日香、岡村恵子、中鉢淳
    • Organizer
      日本応用動物昆虫学会大会
    • Place of Presentation
      大阪府堺市
    • Year and Date
      2016-03-26
    • Related Report
      2015 Research-status Report
  • [Presentation] Differencial toxicity of a novel polyketide diaphorin to various organisms2015

    • Author(s)
      T. Yamada, M. Hamada, A. Sugino, K. Okamura, A. Nakabachi
    • Organizer
      The Irago conference 2015
    • Place of Presentation
      Tahara-city, Aichi
    • Year and Date
      2015-10-22
    • Related Report
      2015 Research-status Report
  • [Presentation] ケミカルバイオロジー的手法によるアブラムシ共生関連タンパク質の機能解析2014

    • Author(s)
      上田翔太,岡村恵子,近藤恭光,斉藤臣雄,土'田努,中鉢淳.
    • Organizer
      環境微生物系学会合同大会
    • Place of Presentation
      静岡県浜松市
    • Year and Date
      2014-10-21 – 2014-10-24
    • Related Report
      2014 Research-status Report
  • [Presentation] オルガネラ様防衛共生細菌Profftellaの姉妹系統の探索2014

    • Author(s)
      山本昴平,岡村恵子,杉野明日香,三澤直美,広瀬侑,中鉢淳.
    • Organizer
      環境微生物系学会合同大会
    • Place of Presentation
      静岡県浜松市
    • Year and Date
      2014-10-21 – 2014-10-24
    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2018-03-22  

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