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Development of in vitro assay systems using legumes and stone fruits for analyses of potyvirus replication

Research Project

Project/Area Number 26450050
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Plant protection science
Research InstitutionRakuno Gakuen University (2016-2017)
The University of Tokyo (2014-2015)

Principal Investigator

Komoda Yuka  酪農学園大学, 農食環境学群, 講師 (90716482)

Co-Investigator(Kenkyū-buntansha) 中原 健二  北海道大学, 農学研究院, 講師 (90315606)
Project Period (FY) 2014-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2016: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2015: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2014: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywordsポティウイルス / 遺伝子発現 / フレームシフト / 培養細胞 / マメ科 / 核果類 / プロトプラスト / 遺伝子導入
Outline of Final Research Achievements

Potyviruses cause diseases in many important crops. To reveal the replication mechanism of potyviruses, we attempted to generate an in vitro potyviral translation-replication system using their natural host plants. The establishment of the natural host-derived in vitro system remains incomplete. We investigated the expression mechanism of pipo ORF discovered recently in potyviral genomes, by using conventional in vitro and in vivo assay systems. The pipo ORF exists in the -1 (or +2) reading frame relative to the viral polyprotein ORF, and is expressed as a fusion protein with the N-terminal half of P3 (P3N-PIPO). We revealed that the pipo ORF is expressed via transcriptional slippage during viral replication. We also found that, in addition to P3N-PIPO, another frameshift product, P3N-ALT, is also produced via transcriptional slippage.

Report

(5 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (6 results)

All 2018 2016 2015

All Journal Article (2 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results,  Acknowledgement Compliant: 1 results) Presentation (4 results)

  • [Journal Article] Truncated yet functional viral protein produced via RNA polymerase slippage implies underestimated coding capacity of RNA viruses2016

    • Author(s)
      Yuka Hagiwara-Komoda, Sun Hee Choi2, Masanao Sato, Go Atsumi, Junya Abe, Junya Fukuda, Mie N. Honjo, Atsushi J. Nagano, Keisuke Komoda, Kenji S. Nakahara, Ichiro Uyeda, Satoshi Naito
    • Journal Title

      Scientific Reports

      Volume: 6 Issue: 1 Pages: 21411-21411

    • DOI

      10.1038/srep21411

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Construction of infectious cDNA clones derived from the potyviruses Clover yellow vein virus and Bean yellow mosaic virus2015

    • Author(s)
      Kenji S. Nakahara, Kei Nishino, Ichiro Uyeda
    • Journal Title

      Methods in Molecular Biology

      Volume: 1236 Pages: 219-227

    • DOI

      10.1007/978-1-4939-1743-3_16

    • ISBN
      9781493917426, 9781493917433
    • Related Report
      2014 Research-status Report
  • [Presentation] 劣性抵抗性遺伝子cyv1をもつエンドウにおける一細胞レベルでのクローバ葉脈黄化ウイルス増殖能解析2018

    • Author(s)
      薦田(萩原)優香,谷中陽祐,中原健二
    • Organizer
      第59回日本植物生理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 植物ウイルスのRNAポリメラーゼと転写スリップ2016

    • Author(s)
      薦田 優香
    • Organizer
      第6回植物RNA研究ネットワークシンポジウム
    • Place of Presentation
      札幌市(北海道大学)
    • Year and Date
      2016-11-17
    • Related Report
      2016 Research-status Report
  • [Presentation] クローバ葉脈黄化ウイルスがコードするP3N-PIPOおよび新規タンパク質の発現機構2015

    • Author(s)
      薦田(萩原)優香,崔 善熹,佐藤昌直,厚見剛,阿部純也,中原健二,上田一郎,内藤哲
    • Organizer
      日本植物病理学会創立100周年記念大会(平成27年度大会)
    • Place of Presentation
      明治大学駿河台キャンパス(東京都千代田区)
    • Year and Date
      2015-03-28 – 2015-03-31
    • Related Report
      2014 Research-status Report
  • [Presentation] P3N-PIPOと相互作用するエンドウの二つの独立した防御機構はクローバ葉脈黄化ウイルスの毒性を進化的に抑制すると思われる2015

    • Author(s)
      鈴木春香,厚見剛,宮下湧理,比佐雄亮,崔 善熹,中原健二
    • Organizer
      日本植物病理学会創立100周年記念大会(平成27年度大会)
    • Place of Presentation
      明治大学駿河台キャンパス(東京都千代田区)
    • Year and Date
      2015-03-28 – 2015-03-31
    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2019-03-29  

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