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Regulation of nitrogen fixation in actinobacteria

Research Project

Project/Area Number 26450098
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Applied microbiology
Research InstitutionKagoshima University

Principal Investigator

KUCHO Ken-ichi  鹿児島大学, 理工学域理学系, 准教授 (70404473)

Project Period (FY) 2014-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2017: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2016: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2015: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2014: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Keywords順遺伝学 / 突然変異株 / ゲノム解析 / 窒素固定 / 放線菌 / 酸素防御 / 転写制御 / 突然変異体 / 遺伝子発現 / ゲルシフト / 共生 / アンモニア / DNA分解酵素 / 形質転換
Outline of Final Research Achievements

Frankia spp. are nitrogen-fixing actinobacteria and have several unique properties. Frankia develops vesicles, which are spherical multicellular structure devoted to nitrogen fixation. Frankia genomes do not contain regulatory genes for nitrogen-fixation (nif) genes that are typically found in other nitrogen-fixing bacteria.
We isolated 49 Frankia mutants that cannot fix nitrogen. These mutants included those showed aberrant vesicle phenotypes (less number, smaller size, thinner envelope) and reduced nif gene expression. They are considered to carry mutations in genes involved in vesicle differentiation and nif gene regulation. We analyzed genomes of mutants and revertants, and specified a gene that is responsible for the mutant phenotype.

Report

(5 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (15 results)

All 2017 2016 2015 2014 Other

All Int'l Joint Research (4 results) Journal Article (3 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 3 results,  Open Access: 2 results) Presentation (8 results) (of which Int'l Joint Research: 2 results)

  • [Int'l Joint Research] University of New Hampshire(米国)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] University of New Hampshire(米国)

    • Related Report
      2016 Research-status Report
  • [Int'l Joint Research] ニューハンプシャー大学(米国)

    • Related Report
      2015 Research-status Report
  • [Int'l Joint Research] リヨン大学(フランス)

    • Related Report
      2015 Research-status Report
  • [Journal Article] Nitrogen Fixation Mutants of the Actinobacterium <i>Frankia Casuarinae</i> CcI32017

    • Author(s)
      Kucho K, Tamari D, Matsuyama S, Nabekura T, Tisa LS
    • Journal Title

      Microbes and Environments

      Volume: 32 Issue: 4 Pages: 344-351

    • DOI

      10.1264/jsme2.ME17099

    • NAID

      130006286300

    • ISSN
      1342-6311, 1347-4405
    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Isolation of Mutants of the Nitrogen-Fixing Actinomycete <i>Frankia</i>2014

    • Author(s)
      Kakoi K., Yamaura M., Kamiharai T., Tamari D., Abe M., Uchiumi T., Kucho K.
    • Journal Title

      Microbes and Environments

      Volume: 29 Issue: 1 Pages: 31-37

    • DOI

      10.1264/jsme2.ME13126

    • NAID

      130003382027

    • ISSN
      1342-6311, 1347-4405
    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Different dynamics of genome content shuffling among host-specificity groups of the symbiotic actinobacterium Frankia2014

    • Author(s)
      Kucho K., Yamanaka T., Sasakawa H., Mansour S.R., Uchiumi T
    • Journal Title

      BMC Genomics

      Volume: 15 Pages: 609-609

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] 放線菌Frankiaの窒素固定変異体2017

    • Author(s)
      九町健一
    • Organizer
      第27回植物微生物研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 放線菌フランキアの窒素固定オペロンの転写調節機構2017

    • Author(s)
      松木遼太郎
    • Organizer
      第27回植物微生物研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 放線菌Frankia casuarinaeの窒素固定変異株2017

    • Author(s)
      九町健一
    • Organizer
      環境微生物系学会合同大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 放線菌フランキアの窒素固定変異株のスクリーニングと特徴づけ2016

    • Author(s)
      松山伸太朗,玉利大樹,九町健一
    • Organizer
      日本微生物生態学会第31回大会
    • Place of Presentation
      横須賀市文化会館(神奈川県横須賀市)
    • Year and Date
      2016-10-22
    • Related Report
      2016 Research-status Report
  • [Presentation] 山崩れによりかく乱された御嶽山における根粒と根圏土壌中のフランキアの群集構造2016

    • Author(s)
      池邉茉莉,中島沙映,山元巧,柴田銃江,今矢明宏,壁谷大介,齋藤智之,岡本透,小野賢治,森貞和仁,飛田博順,九町 健一
    • Organizer
      日本微生物生態学会第31回大会
    • Place of Presentation
      横須賀市文化会館(神奈川県横須賀市)
    • Year and Date
      2016-10-22
    • Related Report
      2016 Research-status Report
  • [Presentation] 放線菌Frankiaの細胞表層多糖の変化が窒素固定と共生に及ぼす影響2016

    • Author(s)
      九町健一,白石隼大,小川誠也,堅持智博,飛鳥井滉也,金城伶, Philippe Normand,橋本雅仁
    • Organizer
      日本微生物生態学会第31回大会
    • Place of Presentation
      横須賀市文化会館(神奈川県横須賀市)
    • Year and Date
      2016-10-22
    • Related Report
      2016 Research-status Report
  • [Presentation] Isolation and characterization of nitrogen fixation mutants of Frankia2015

    • Author(s)
      Daiki Tamari, Shintaro Matsuyama and Ken-ichi Kucho
    • Organizer
      18th International meeting on Frankia and actinorhizal plants
    • Place of Presentation
      モンペリエ(フランス)
    • Year and Date
      2015-08-25
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] Influences of alteration of surface polysaccharide in Frankia on symbiotic nitrogen fixation2015

    • Author(s)
      Shiraishi H, Ogawa S, Asukai K, Kinjyo R, Kenmochi T, Hashimoto M and Kucho K
    • Organizer
      18th International meeting on Frankia and actinorhizal plants
    • Place of Presentation
      モンペリエ(フランス)
    • Year and Date
      2015-08-25
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research

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Published: 2014-04-04   Modified: 2022-06-07  

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