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Studies about the regulatory mechanisms of gene expression focusing on the small RNA in dinoflagellates

Research Project

Project/Area Number 26450289
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Aquatic life science
Research InstitutionKitasato University

Principal Investigator

Kobiyama Atsushi  北里大学, 海洋生命科学部, 准教授 (60337988)

Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2016: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2015: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2014: ¥2,080,000 (Direct Cost: ¥1,600,000、Indirect Cost: ¥480,000)
Keywords渦鞭毛藻 / 低分子RNA / 遺伝子発現 / 発現調節機構
Outline of Final Research Achievements

We aimed to clarify the regulatory mechanisms of gene expression in a dinoflagellate, Alexandrium tamarense, and focused on the functions of small RNA (sRNA). We had already isolated 34-nt sRNA; we investigated the possible existence of molecules that bind to the sRNA to clarify the function of the sRNA of A. tamarense, and we revealed the possibility that the sRNA binds to some molecules in the cell. We determined the nucleotide sequences of the peripheral region of the sRNA gene on genomic DNA and predicted the precursor cDNA of the sRNA. We tried to isolate a similar sRNA from A. catenella and Symbiodinium. As a result, a similar sRNA was isolated from only A. catenella. Next, to confirm the existence of Argonaute proteins in A. tamarense, we employed PCR and amplified the DNA fragment encoding the PIWI domain of Argonaute. Moreover, we revealed that putative transcription factor binds to the 5' untranscribed region of an A. tamarense gene.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (1 results)

All 2015

All Presentation (1 results)

  • [Presentation] 渦鞭毛藻Alexandrium catenellaにおける低分子RNAの解析2015

    • Author(s)
      小檜山篤志,石橋陽,山田雄一郎,緒方武比古
    • Organizer
      平成27年度日本水産学会秋季大会
    • Place of Presentation
      東北大学 川内北キャンパス( 宮城県仙台市)
    • Year and Date
      2015-09-22
    • Related Report
      2015 Research-status Report

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Published: 2014-04-04   Modified: 2018-03-22  

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