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Explore molecular basis underlying formation of chemical diversity in genus Panax through RNA-Seq analysis of three Panax species with different chemical compositions

Research Project

Project/Area Number 26460119
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Natural medicines
Research InstitutionUniversity of Toyama

Principal Investigator

ZHU Shu  富山大学, 和漢医薬学総合研究所, 助教 (20377360)

Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2016: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2015: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2014: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
KeywordsPanax属植物 / RNA-Seq解析 / トリテルペンサポニン / 生合成遺伝子 / 成分的多様性 / 生合成 / トランスクリプトーム解析 / 次世代シーケンサー
Outline of Final Research Achievements

Genus Panax (Araliaceae), widely known as Ginseng genus, is one of the most important medicinal genera. The underground parts of almost all species in the genus are traditionally-used as medicines, including three highly-esteemed ones as Ginseng, American Ginseng and Notoginseng. Triterpene saponins, generally referred to as ginsenosides, are bioactive constituents of Ginseng drugs. Each Panax species has its own characteristic saponin composition. In this study, three Panax species with closely phylogenetical relationship but with quite different chemical compositions were focused on as representatives. Deep transcriptome analysis by next-generation DNA sequencer has been conducted on the three species to explore the molecular basis responsible for the formation of chemical diversity within genus Panax. The genes involved in biosynthetic pathway of triterpene production from the three species were compared.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (9 results)

All 2017 2016 2015

All Journal Article (4 results) (of which Peer Reviewed: 4 results,  Acknowledgement Compliant: 1 results,  Open Access: 1 results) Presentation (5 results) (of which Int'l Joint Research: 1 results,  Invited: 4 results)

  • [Journal Article] MS/MS similarity networking accelerated target profiling of triterpene saponins in Eleutherococcus senticosus leaves.2017

    • Author(s)
      Ge Y. W., Zhu S., Yoshimatsu K., Komatsu K.
    • Journal Title

      Food Chem.

      Volume: 227 Pages: 444-452

    • DOI

      10.1016/j.foodchem.2017.01.119

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Development of intron length polymorphism markers in genes encoding diketide-CoA synthase and curcumin synthase for discriminating Curcuma species2016

    • Author(s)
      Kita T., Komatsu K., Zhu S., Iida O., Sugimura K., Kawahara N.,Taguchi H., Masamura N., Cai S. Q.
    • Journal Title

      Food Chem.

      Volume: 194 Pages: 1329-1336

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] Genetic and chemical characterization of white and red peony root derived from Paeonia lactiflora2015

    • Author(s)
      Zhu S, Yu XL, Wu YQ, Shiraishi F, Kawahara N, Komatsu K.
    • Journal Title

      J Nat Med.

      Volume: 69 Pages: 35-45

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] A systematic study of the influencing parameters and improvement of quantitative analysis of multi-component with single marker method using notoginseng as research subject2015

    • Author(s)
      Wang C. Q., Jia X. H., Zhu S., Komatsu K., Wang X., Cai S. Q.
    • Journal Title

      Talanta

      Volume: 134 Pages: 587-595

    • DOI

      10.1016/j.talanta.2014.11.028

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Presentation] Integrated quality evaluation of herbal medicines based on genetic and chemical diversity2016

    • Author(s)
      Zhu S.
    • Organizer
      江西省中医薬国際協力推進交流会
    • Place of Presentation
      南昌
    • Year and Date
      2016-11-22
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Effects of Oleanane-type Saponins from the Leaves of Eleutherococcus senticosus on Axonal Outgrowth2016

    • Author(s)
      葛 躍偉,東田千尋,Zhu S.,吉松嘉代,小松かつ子
    • Organizer
      第33回和漢医薬学会学術大会
    • Place of Presentation
      東京
    • Year and Date
      2016-08-27
    • Related Report
      2016 Annual Research Report
  • [Presentation] 遺伝子解析を活用した薬用植物・生薬の資源探索と品質評価について2016

    • Author(s)
      Zhu S.
    • Organizer
      薬用植物フォーラム2016
    • Place of Presentation
      つくば
    • Year and Date
      2016-07-12
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Genetic marker indexed quality evaluation of herbal medicines.2015

    • Author(s)
      Zhu S, Komatsu K.
    • Organizer
      The 2nd International Symposium for the Extension of Multi-Purpose Natural Products
    • Place of Presentation
      Gyeongsan; South Korea
    • Year and Date
      2015-05-28
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] Evaluation of herbal medicines through integrated approaches.2015

    • Author(s)
      Zhu S., He J. Y., Komatsu K
    • Organizer
      The JSPS-NRCT Follow-Up Seminar 2015 and the 31st International Annual Meeting in Pharmaceutical Sciences.
    • Place of Presentation
      Bangkok, Thailand
    • Year and Date
      2015-01-22 – 2015-01-23
    • Related Report
      2014 Research-status Report
    • Invited

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Published: 2014-04-04   Modified: 2018-03-22  

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