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Identifying novel angiogenesis-related pathway from differentially expressed genes during retinal development obtained by the microarray analysis

Research Project

Project/Area Number 26460395
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Pathological medical chemistry
Research InstitutionKyoto Prefectural University of Medicine

Principal Investigator

Nakano Masakazu  京都府立医科大学, 医学(系)研究科(研究院), 准教授 (70381944)

Co-Investigator(Kenkyū-buntansha) 田代 啓  京都府立医科大学, 医学(系)研究科(研究院), 教授 (10263097)
Co-Investigator(Renkei-kenkyūsha) KINOSHITA SHIGERU  京都府立医科大学, 大学院医学研究科, 教授 (30116024)
SATO RYUICHI  京都府立医科大学, 大学院医学研究科, 助教 (30717533)
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥4,940,000 (Direct Cost: ¥3,800,000、Indirect Cost: ¥1,140,000)
Fiscal Year 2016: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2015: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2014: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywords血管新生 / 網膜 / 網羅的遺伝子発現解析 / マイクロアレイ / シグナル伝達 / 血管内皮細胞 / ノックダウン / 細胞接着 / 三次元培養 / 網羅的発現解析
Outline of Final Research Achievements

As angiogenesis of mouse retina begins at right after birth, developing mouse retina has been serving as an ideal model for investigating angiogenesis. We previously performed a comprehensive gene expression analysis using pre- and postnatal mouse retina, and obtained several candidate genes that were differentially expressed during retinal development.
We here analyzed whether these genes were functionally involved in the angiogenesis. After confirming the expression results by our highly sensitive qPCR system specialized for developmental retina (Adachi et al., Genes Cells, 2015), we analyzed the effect on angiogenesis of one gene encoding a cell adhesion molecule. When the expression of this gene was transiently suppressed in mouse endothelial cells, we found that the induction of angiogenesis was significantly inhibited.
The angiogenesis-related gene identified in this study should be a promising tool for discovering a novel molecular mechanism of angiogenesis.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (22 results)

All 2017 2016 2015 2014

All Journal Article (10 results) (of which Int'l Joint Research: 4 results,  Peer Reviewed: 10 results,  Open Access: 5 results,  Acknowledgement Compliant: 1 results) Presentation (12 results) (of which Invited: 6 results)

  • [Journal Article] Genetic association study of exfoliation syndrome identifies a protective rare variant at LOXL1 and five new susceptibility loci.2017

    • Author(s)
      Aung T, Nakano M, et al
    • Journal Title

      Nat. Genet.

      Volume: 49

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Downregulation of EGFR in a metastatic brain lesion of EGFR-mutated non-small cell lung cancer using a tyrosine kinase inhibitor: A case report.2017

    • Author(s)
      Takagaki M, Kinoshita M, Nishino K, Nakano M, Adachi H, Ueno M, Kitamura M, Fujimoto Y, Tashiro K, Tomita Y, Imamura F, Yoshimine T.
    • Journal Title

      Oncol. Lett.

      Volume: 13 Issue: 4 Pages: 2085-2088

    • DOI

      10.3892/ol.2017.5677

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Efficient and reliable establishment of lymphoblastoid cell lines by Epstein-Barr virus transformation from a limited amount of peripheral blood.2017

    • Author(s)
      Omi N, Tokuda Y, Ikeda Y, Ueno M, Mori K, Sotozono C, Kinoshita S, Nakano M, Tashiro K.
    • Journal Title

      Sci. Rep.

      Volume: 7 Issue: 1 Pages: 43833-43833

    • DOI

      10.1038/srep43833

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Stronger association of CDKN2B-AS1 variants in female normal-tension glaucoma patients in a Japanese population.2016

    • Author(s)
      Mori K, Nakano M, Tokuda Y, Ikeda Y, Ueno M, Sotozono C, Kinoshita S, Tashiro K.
    • Journal Title

      Invest. Ophthalmol. Vis. Sci.

      Volume: 57 Issue: 14 Pages: 6416-6417

    • DOI

      10.1167/iovs.16-20417

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Genome-wide association study identifies five new susceptibility loci for primary angle closure glaucoma.2016

    • Author(s)
      Khor, C. C., Do, T., Jia, H., Nakano, M., et al
    • Journal Title

      Nat. Genet.

      Volume: 48 Issue: 5 Pages: 556-562

    • DOI

      10.1038/ng.3540

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Trinucleotide Repeat Expansion in TCF4 Gene of Fuchs’ Endothelial Corneal Dystrophy in Japanese.2015

    • Author(s)
      Nakano, M., Okumura, N., Nakagawa, H., Koizumi, N., Ikeda, Y., Ueno, M., Yoshii, K., Adachi, H., Aleff, R., Butz, M., Highsmith, E. W., Tashiro, K., Baratz, K. H., Kinoshita, S., Wieben, E. D.
    • Journal Title

      Invest. Ophthalmol. Vis. Sci.

      Volume: 56 Issue: 8 Pages: 4865-4869

    • DOI

      10.1167/iovs.15-17082

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Stage-specific reference genes significant for quantitative PCR during mouse retinal development.2015

    • Author(s)
      Adachi, H., Tominaga, H., Maruyama, Y., Yoneda, K., Maruyama, K., Yoshii, K., Kinoshita, S., Nakano, M., Tashiro, K.
    • Journal Title

      Genes Cells

      Volume: 20 Issue: 8 Pages: 625-635

    • DOI

      10.1111/gtc.12254

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] A common variant near TGFBR3 is associated with primary open angle glaucoma.2015

    • Author(s)
      Li, Z., Allingham, R. R., Nakano, M., et al
    • Journal Title

      Hum. Mol. Genet.

      Volume: 24 Issue: 13 Pages: 3880-3892

    • DOI

      10.1093/hmg/ddv128

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] A common variant mapping to CACNA1A is associated with susceptibility to exfoliation syndrome.2015

    • Author(s)
      Aung T
    • Journal Title

      Nature Genetics

      Volume: 47 Issue: 4 Pages: 387-392

    • DOI

      10.1038/ng.3226

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Novel common variants and susceptible haplotype for exfoliation glaucoma specific to Asian population2014

    • Author(s)
      Nakano M, Ikeda Y, Tokuda Y, Fuwa M, Ueno M, Imai K, Sato R, Omi N, Adachi H, Kageyama M, Mori K, Kinoshita S,Tashiro K
    • Journal Title

      Sci Rep

      Volume: 4 Issue: 1 Pages: 5340-5340

    • DOI

      10.1038/srep05340

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] 新規生理的血管新生関連候補遺伝子が血管新生に与える影響の解析2016

    • Author(s)
      足立博子, 富永洋之, 丸山悠子, 米田一仁, 丸山和一, 外園千恵, 木下茂, 中野正和, 田代啓.
    • Organizer
      第6回4大学連携研究フォーラム
    • Place of Presentation
      京都
    • Year and Date
      2016-12-07
    • Related Report
      2016 Annual Research Report
  • [Presentation] 緑内障を最新ゲノム解析技術で解き明かす2016

    • Author(s)
      中野正和
    • Organizer
      第11回緑内障若手研究者の会
    • Place of Presentation
      京都
    • Year and Date
      2016-11-05
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Fuchs角膜内皮ジストロフィのゲノムワイド関連解析2016

    • Author(s)
      中野正和
    • Organizer
      第17回眼科DNAチップ研究会
    • Place of Presentation
      京都
    • Year and Date
      2016-11-03
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Genome-wide association study of Fuchs endothelial corneal dystrophy in a Japanese population2016

    • Author(s)
      Nakano M, Adachi H, Tokuda Y, Nakagawa H, Ikeda Y, Ueno M, Sotozono C, Kinoshita S, Tashiro K.
    • Organizer
      66th Annual Meeting of the American Society of Human Genetics
    • Place of Presentation
      Vancouver, Canada
    • Year and Date
      2016-10-18
    • Related Report
      2016 Annual Research Report
  • [Presentation] 血管新生関連候補遺伝子が血管内皮細胞の管腔形成能に与える影響の解析2015

    • Author(s)
      足立博子, 富永洋之, 丸山悠子, 米田一仁, 丸山和一, 木下茂, 中野正和, 田代啓.
    • Organizer
      第38回日本分子生物学会年会・第88回日本生化学会大会 合同大会
    • Place of Presentation
      神戸
    • Year and Date
      2015-12-01
    • Related Report
      2015 Research-status Report
  • [Presentation] マウス血管内皮細胞株を用いた管腔形成能評価系の確立2015

    • Author(s)
      足立博子, 富永洋之, 丸山悠子, 米田一仁, 丸山和一, 木下茂, 中野正和, 田代啓.
    • Organizer
      第5回4大学連携研究フォーラム
    • Place of Presentation
      京都
    • Year and Date
      2015-11-25
    • Related Report
      2015 Research-status Report
  • [Presentation] 遺伝子からゲノムへ -ポストゲノム時代のゲノム医科学研究-2015

    • Author(s)
      中野正和
    • Organizer
      東京理科大学長万部キャンパス「現代科学セミナー」
    • Place of Presentation
      長万部
    • Year and Date
      2015-07-04
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] Genetics study of Fuchs’ endothelial corneal dystrophy: What we have learned from glaucoma genetics study2015

    • Author(s)
      Nakano, M.
    • Organizer
      The 1st Advanced Biomedical Engineering Research Center Symposium
    • Place of Presentation
      Kyotanabe
    • Year and Date
      2015-02-21
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] Genetics study of exfoliation syndrome/exfoliation glaucoma2015

    • Author(s)
      Nakano, M.
    • Organizer
      Kyoto International Workshop in Visual Science 2015
    • Place of Presentation
      Kyoto
    • Year and Date
      2015-02-20
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] 発達段階の異なるマウス網膜を用いた相対定量PCR法の確立2014

    • Author(s)
      足立博子, 富永洋之, 丸山悠子, 米田一仁, 丸山和一, 吉井健悟, 木下茂, 中野正和, 田代啓.
    • Organizer
      第4回4大学連携研究フォーラム
    • Place of Presentation
      京都
    • Year and Date
      2014-12-02
    • Related Report
      2014 Research-status Report
  • [Presentation] Genome-wide association study of exfoliation syndrome/exfoliation glaucoma in a Japanese population2014

    • Author(s)
      Nakano, M., Ikeda, Y., Tokuda, Y., Adachi, H., Ueno, M., Imai, K., Sato, R., Omi, N., Mori, K., Kinoshita, S., Tashiro, K.
    • Organizer
      64th Annual Meeting of the American Society of Human Genetics
    • Place of Presentation
      San Diego
    • Year and Date
      2014-10-18 – 2014-10-22
    • Related Report
      2014 Research-status Report
  • [Presentation] 大規模データに基づくゲノム医科学研究2014

    • Author(s)
      中野正和
    • Organizer
      宇宙航空研究開発機構 (JAXA) バイオインフォマティクス勉強会
    • Place of Presentation
      筑波
    • Year and Date
      2014-09-17
    • Related Report
      2014 Research-status Report
    • Invited

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Published: 2014-04-04   Modified: 2018-03-22  

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