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Effects of RNA purification procedures on mRNA-based body fluid identification

Research Project

Project/Area Number 26460895
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Legal medicine
Research InstitutionNational Research Institute of Police Science

Principal Investigator

Akutsu Tomoko  科学警察研究所, 法科学第一部, 室長 (50356151)

Co-Investigator(Kenkyū-buntansha) 櫻田 宏一  東京医科歯科大学, 大学院医歯学総合研究科, 教授 (10334228)
Project Period (FY) 2014-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2016: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2015: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2014: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
KeywordsmRNA / 抽出・精製方法 / マルチプレックスRT-PCR / RNA
Outline of Final Research Achievements

To ascertain the effects of purification procedures on the mRNA-based body fluid identification, comparative analyses of the yield and quality of total RNA were performed between different purification procedures. As a result, silica column can purify higher-quality RNA; however, the sensitivity of the real-time RT-PCR analysis was higher in the magnetic beads-purified samples caused by the relative efficiency of extracting short-length RNA from degraded samples. We also show that the quantification of relative levels of body fluid-specific genes could be influenced by the purification procedure. Although use of high-quality RNA is generally required for gene expression analysis, the relevance of short RNA fragments cannot be ruled out in forensic samples. Then, a multiplex RT-PCR assay, which can be applied regardless of the purification procedure, was developed as a robust tool for body fluid identification. Each amplicon could be detected and quantified by chip electrophoresis.

Report

(5 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (6 results)

All 2018 2017 2016 2015

All Journal Article (3 results) (of which Peer Reviewed: 2 results,  Acknowledgement Compliant: 1 results) Presentation (3 results) (of which Int'l Joint Research: 1 results)

  • [Journal Article] Evaluation of skin- or sweat-characteristic mRNAs for inferring the human origin of touched contact traces2018

    • Author(s)
      Akutsu Tomoko、Watanabe Ken、Takamura Ayari、Sakurada Koichi
    • Journal Title

      Legal Medicine

      Volume: 33 Pages: 36-41

    • DOI

      10.1016/j.legalmed.2018.05.003

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Quantitative evaluation of candidate genes and development of a multiplex RT-PCR assay for the forensic identification of vaginal fluid2017

    • Author(s)
      Tomoko Akutsu, Ken Watanabe, Ayari Takamura, Koichi Sakurada
    • Journal Title

      Forensic Science International: Genetics Supplement Series

      Volume: 6 Pages: e211-e213

    • DOI

      10.1016/j.fsigss.2017.09.078

    • Related Report
      2017 Annual Research Report
  • [Journal Article] Comparison of automated and manual purification of total RNA for mRNA-based identification of body fluids2015

    • Author(s)
      Tomoko Akutsu, Tetsushi Kitayama, Ken Watanabe, Koichi Sakurada
    • Journal Title

      Forensic Science International: Genetics

      Volume: 14 Pages: 11-17

    • DOI

      10.1016/j.fsigen.2014.09.007

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] Quantitative evaluation of candidate genes and development of a multiplex RT-PCR assay for the forensic identification of vaginal fluid2017

    • Author(s)
      Tomoko Akutsu, Ken Watanabe, Ayari Takamura, Koichi Sakurada
    • Organizer
      27th Congress of International Society for Forensic Genetics
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] リアルタイムRT-PCR法による法科学的資料の汗垢証明mRNAマーカーの評価2017

    • Author(s)
      阿久津智子、渡邊賢、髙村彩里、櫻田宏一
    • Organizer
      第86回日本法医学会学術関東地方集会
    • Related Report
      2017 Annual Research Report
  • [Presentation] mRNAを指標とした膣液証明法に関する基礎的検討2016

    • Author(s)
      阿久津智子、渡邊賢、髙村彩里、櫻田宏一
    • Organizer
      日本法科学技術学会第22回学術集会
    • Place of Presentation
      中野サンプラザ
    • Year and Date
      2016-11-10
    • Related Report
      2016 Research-status Report

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Published: 2014-04-04   Modified: 2019-03-29  

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