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Identification of susceptibility variants to type 1 diabetes using whole-exome sequencing

Research Project

Project/Area Number 26461344
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Metabolomics
Research InstitutionInternational University of Health and Welfare (2015-2016)
Saitama Medical University (2014)

Principal Investigator

Awata Takuya  国際医療福祉大学, 大学病院, 教授 (40184303)

Co-Investigator(Renkei-kenkyūsha) KURIHARA SUSUMU  埼玉医科大学, 医学部, 准教授 (90286104)
OKAZAKI YASUSHI  埼玉医科大学, 医学部, 教授 (80280733)
NISHIDA NAO  国立研究開発法人国立国際医療研究センター, 肝炎・免疫研究センター, 上級研究員 (50456109)
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2016: ¥1,040,000 (Direct Cost: ¥800,000、Indirect Cost: ¥240,000)
Fiscal Year 2015: ¥1,300,000 (Direct Cost: ¥1,000,000、Indirect Cost: ¥300,000)
Fiscal Year 2014: ¥2,340,000 (Direct Cost: ¥1,800,000、Indirect Cost: ¥540,000)
Keywords1型糖尿病 / 疾患感受性遺伝子 / 全エクソーム解析 / 2型糖尿病 / トール様受容体 / バリアント / SNP / 変異 / 多型 / 疾患感受性 / 日本人 / 遺伝 / 自然免疫 / エクソーム解析 / 感受性 / 次世代シーケンス
Outline of Final Research Achievements

We performed whole-exosome sequencing of 21 patients with type 1 diabetes mellitus. Among the detected susceptibility variant candidates, we focused on low-frequency nonsynonymous mutations found in one gene of the Toll-like receptor (TLR) family, which is important for innate immunity. In case-control association tests including over 5000 subjects, the frequency of homozygotes of the mutation was significantly increased in patients with type 1 diabetes, and in a family of type 1 diabetes brothers, it was found that both brothers were homozygotes of this mutation. Interestingly, wild-type alleles were significantly increased in type 2 diabetes. We are currently conducting functional analysis.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (4 results)

All 2015 2014

All Journal Article (4 results)

  • [Journal Article] 1型糖尿病に関連した遺伝子研究の歴史と最近の流れ2015

    • Author(s)
      粟田卓也
    • Journal Title

      月刊糖尿病

      Volume: 7 Pages: 76-86

    • Related Report
      2015 Research-status Report
  • [Journal Article] 緩徐進行1型糖尿病の病態とそれを考慮した治療介入2015

    • Author(s)
      粟田卓也
    • Journal Title

      プラクティス

      Volume: 32 Pages: 668-677

    • Related Report
      2015 Research-status Report
  • [Journal Article] 1型糖尿病に関連した遺伝子研究の歴史と最近の流れ2015

    • Author(s)
      粟田卓也
    • Journal Title

      月刊糖尿病

      Volume: 7 Pages: 76-86

    • Related Report
      2014 Research-status Report
  • [Journal Article] 1型糖尿病の遺伝素因2014

    • Author(s)
      粟田卓也
    • Journal Title

      ホルモンと臨床

      Volume: 60 Pages: 933-941

    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2018-03-22  

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