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Detection of circulating tumor DNA in cell-free DNA in gastric cancer patients and imatinib-resistant GIST patients using next-generation sequencer

Research Project

Project/Area Number 26461977
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Digestive surgery
Research InstitutionOsaka University

Principal Investigator

Kurokawa Yukinori  大阪大学, 医学系研究科, 助教 (10470197)

Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2016: ¥1,170,000 (Direct Cost: ¥900,000、Indirect Cost: ¥270,000)
Fiscal Year 2015: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2014: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
KeywordsctDNA / 次世代シーケンサー / 胃癌 / GIST
Outline of Final Research Achievements

We investigated whether tumor-specific mutations could be detected in circulating tumor DNA (ctDNA) from the peripheral blood in patients with gastric cancer or imatinib-resistant GIST.
Cell-free DNA was extracted in blood samples in 6 patients with gastric cancer. Identical TP 53 mutations could be detected in ctDNA in 3 of the 6 patients. All 3 patients had extremely progressive disease, and the fraction rates of ctDNA were also consistent with tumor volume and disease course. Regarding GIST, imatinib-resistant lesions had single nucleotide substitutions in C-KIT exon 13 in three patients and exon 18 in one patient. Identical secondary C-KIT mutations could be detected in ctDNA with a mutant fraction range of 0.010- 9.385%, and the fraction rate of ctDNA was consistent with tumor volume and disease course.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (3 results)

All 2016 2015

All Journal Article (2 results) (of which Peer Reviewed: 2 results,  Open Access: 1 results) Presentation (1 results)

  • [Journal Article] Detecting secondary c-KIT mutations in the peripheral blood of patients with imatinib-resistant gastrointestinal stromal tumor.2016

    • Author(s)
      Wada N, Kurokawa Y, Takahashi T, Hamakawa T, Hirota S, Naka T, Miyazaki Y, Makino T, Yamasaki M, Nakajima K, Takiguchi S, Mori M, Doki Y.
    • Journal Title

      Oncology

      Volume: 90 Issue: 2 Pages: 112-117

    • DOI

      10.1159/000442948

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Monitoring gastric cancer progression with circulating tumour DNA2015

    • Author(s)
      Hamakawa T, Kukita Y, Kurokawa Y, Miyazaki Y, Takahashi T, Yamasaki M, Miyata H, Nakajima K, Taniguchi K, Takiguchi S, Mori M, Doki Y, Kato K
    • Journal Title

      British Journal of Cancer

      Volume: 112 Issue: 2 Pages: 352-356

    • DOI

      10.1038/bjc.2014.609

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Presentation] イマチニブ耐性GIST患者の末梢血におけるC-KITの変異検索2016

    • Author(s)
      和田範子、黒川幸典、高橋剛、宮崎安弘、牧野知紀、山崎誠、中島清一、瀧口修司、森正樹、土岐祐一郎
    • Organizer
      第71回日本消化器外科学会総会
    • Place of Presentation
      徳島
    • Year and Date
      2016-07-14
    • Related Report
      2016 Annual Research Report

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Published: 2014-04-04   Modified: 2018-03-22  

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