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The Integrated Transcriptome Analysis of Adipocyte and Osteoblast Differentiation

Research Project

Project/Area Number 26462317
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Orthopaedic surgery
Research InstitutionSaitama Medical University

Principal Investigator

Mizuno Yosuke  埼玉医科大学, 医学部, 講師 (30406532)

Co-Investigator(Kenkyū-buntansha) 仲地 豊  埼玉医科大学, 医学部, 助教 (10522097)
Project Period (FY) 2014-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2016: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Fiscal Year 2015: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2014: ¥2,470,000 (Direct Cost: ¥1,900,000、Indirect Cost: ¥570,000)
Keywords非コードRNA / 間葉系幹細胞 / 脂肪細胞分化 / 骨芽細胞分化 / マイクロRNA / RNA / トランスクリプトーム解析 / トランスクリプトーム / 転写開始点 / スプライシングバリアント / 選択的ポリA付加
Outline of Final Research Achievements

Mesenchymal stem cells can differentiate into various cell types. Particularly the regulatory mechanisms of the balance between differentiation to adipocytes and osteoblasts are closely linked to the pathogenesis of metabolic syndrome and osteoporosis. We performed detailed RNA expression analysis using differentiating cells. Differential expression of each exon and ncRNAs are comprehensively analyzed using exon array, miRNA array and RNA-sequencing. As a result, we detected various RNA variants of other genes and ncRNAs that are differentially expressed between both types of differentiation. We estimate that specific RNA variants and ncRNAs which regulate the differentiation are involved in those differentially expressed RNA variants, and currently the experiments for their validation are underway

Report

(5 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (8 results)

All 2017 2016 2015 2014

All Presentation (8 results) (of which Int'l Joint Research: 3 results,  Invited: 2 results)

  • [Presentation] The regulatory mechanisms of osteoblast and adipocyte differentiation reveal ed by the integrated transcriptome analysis2017

    • Author(s)
      Yosuke Mizuno, Yutaka Nakachi, Yukiko Yatsuka, Yasushi Okazaki
    • Organizer
      The 43rd Naito Conference
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] トランスクリプトーム情報を活用した脂肪細胞・骨芽細胞分化制御機構の解明2016

    • Author(s)
      水野 洋介、仲地 豊、八塚 由紀子、岡崎 康司
    • Organizer
      第39回日本分子生物学会年会
    • Place of Presentation
      神奈川県横浜市
    • Related Report
      2016 Research-status Report
  • [Presentation] The regulatory mechanisms of adipocyte and osteoblast differentiation revealed by the integrated transcriptome analysis2016

    • Author(s)
      Yosuke Mizuno, Yutaka Nakachi, Yukiko Yatsuka, Yasushi Okazaki
    • Organizer
      RNA2016
    • Place of Presentation
      京都府京都市
    • Related Report
      2016 Research-status Report
    • Int'l Joint Research
  • [Presentation] 骨芽細胞と脂肪細胞の分化を制御する転写物バリアント、マイクロRNA、非コードRNAの探索2015

    • Author(s)
      水野 洋介、仲地 豊、八塚 由紀子、徳澤 佳美、岡﨑 康司
    • Organizer
      BMB2015
    • Place of Presentation
      兵庫県神戸市、神戸ポートアイランド
    • Year and Date
      2015-12-02
    • Related Report
      2015 Research-status Report
  • [Presentation] The Integrated Transcriptome Analysis of Adipocyte and Osteoblast Differentiation2015

    • Author(s)
      Yosuke Mizuno, Yutaka Nakachi, Yukiko Yatsuka, Yoshimi Tokuzawa, Yasushi Okazaki
    • Organizer
      IMGC2015
    • Place of Presentation
      神奈川県横浜市、横浜市開港記念会館
    • Year and Date
      2015-11-09
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] トランスクリプトーム情報を活用した、骨芽細胞と脂肪細胞の分化機構の統合的解析2015

    • Author(s)
      水野 洋介、仲地 豊、八塚 由紀子、徳澤 佳美、岡﨑 康司
    • Organizer
      第17回日本RNA学会年会
    • Place of Presentation
      北海道札幌市、ホテルライフォート札幌
    • Year and Date
      2015-07-15
    • Related Report
      2015 Research-status Report
  • [Presentation] The Integrated Transcriptome Analysis of Adipocyte and Osteoblast Differentiation2015

    • Author(s)
      Yosuke Mizuno, Yutaka Nakachi, Yukiko Yatsuka, Yoshimi Tokuzawa, Yasushi Okazaki
    • Organizer
      Keystone Symposium 2014, Obesity and the Metabolic Syndrome: Mitochondria and Energy Expenditure (X7)
    • Place of Presentation
      Whistler, British Columbia, Canada
    • Year and Date
      2015-03-24
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] トランスクリプトーム解析で見えてくる脂肪細胞・骨芽細胞分化調節メカニズム2014

    • Author(s)
      水野 洋介
    • Organizer
      第37回日本分子生物学会年会
    • Place of Presentation
      パシフィコ横浜(神奈川県横浜市)
    • Year and Date
      2014-11-25
    • Related Report
      2014 Research-status Report
    • Invited

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Published: 2014-04-04   Modified: 2019-03-29  

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