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Development of genetic diagnosis for Japanese Retinitis Pigmentosa patients using next generation sequencer

Research Project

Project/Area Number 26462659
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeMulti-year Fund
Section一般
Research Field Ophthalmology
Research InstitutionHamamatsu University School of Medicine

Principal Investigator

Hotta Yoshihiro  浜松医科大学, 医学部, 教授 (90173608)

Co-Investigator(Kenkyū-buntansha) 山本 修一  千葉大学, 大学院医学研究院, 教授 (20230550)
寺崎 浩子  名古屋大学, 医学系研究科, 教授 (40207478)
細野 克博  浜松医科大学, 医学部, 助教 (60402260)
高橋 政代  国立研究開発法人理化学研究所, 多細胞システム形成研究センター, プロジェクトリーダー (80252443)
蓑島 伸生  浜松医科大学, 光尖端医学教育研究センター, 教授 (90181966)
Research Collaborator KURATA KENTARO  
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2016: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2015: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Fiscal Year 2014: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
Keywords網膜色素変性 / 次世代シークエンサー / 遺伝子変異解析 / 遺伝性網膜変性
Outline of Final Research Achievements

Retinitis pigmentosa (RP) is a highly heterogeneous genetic disease. This study was conducted to investigate genetic and clinical features in 2 unrelated Japanese RP patients. To identify causative mutations, 74 genes known to cause RP or Leber congenital amaurosis were examined by targeted next-generation sequencing (NGS). Clinical analyses were based on ophthalmic examination, fundus photography, and electroretinography.
Clinical courses were similar in both patients. The onset of nyctalopia occurred in the first decade. Fundus examination showed typical RP. Although visual acuity was relatively preserved even into the fourth decade, visual field areas exhibited rapid deterioration in their mid-teens, and subsequent severe concentric constriction in the third decade. Mutation analysis revealed both patients’ conditions were due to PRPF31 mutations resulting in autosomal dominant RP. This study suggests that our targeted-NGS approach could be useful for genetic diagnosis for RP.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (28 results)

All 2017 2016 2015 2014

All Journal Article (8 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 8 results,  Open Access: 5 results,  Acknowledgement Compliant: 3 results) Presentation (16 results) (of which Int'l Joint Research: 2 results,  Invited: 1 results) Book (4 results)

  • [Journal Article] 前眼部OCTを用いた水平直筋附着部測定についての検討2017

    • Author(s)
      長谷岡宗・新井慎司・鷲山愛・稲垣理佐子・鈴木寛子・古森美和・彦谷明子・堀田喜裕・佐藤美保
    • Journal Title

      眼科臨床紀要

      Volume: 10(2) Pages: 129-133

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Novel HPS6 mutations identified by whole-exome sequencing in two Japanese sisters with suspected ocular albinism.2016

    • Author(s)
      *Miyamichi D, Asahina M, Nakajima J, Sato M, Hosono K, Nomura T, Negishi T, Miyake N, Hotta Y, Ogata T, Matsumoto N.
    • Journal Title

      J Hum Genet.

      Volume: 61(9) Issue: 9 Pages: 839-842

    • DOI

      10.1038/jhg.2016.56

    • NAID

      40020938230

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Novel OPN1LW/OPN1MW deletion mutations in 2 Japanese families with blue cone monochromacy.2016

    • Author(s)
      Wang C, Hosono K, Kachi S, Suto K, Nakamura M, Terasaki H, Miyake Y, Hotta Y, Minoshima S.
    • Journal Title

      Hum Genome Var.

      Volume: 3 Issue: 1 Pages: 16011-16011

    • DOI

      10.1038/hgv.2016.11

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Evaluation of Surgical Strategy Based on the Intraoperative Superior Oblique Tendon Traction Test2016

    • Author(s)
      Komori M, Suzuki H, Hikoya A, Sawada M, Hotta Y, Sato M.
    • Journal Title

      PLoS One

      Volume: 11(12) Issue: 12 Pages: e0168245-e0168245

    • DOI

      10.1371/journal.pone.0168245

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Genotype-phenotype correlation of the PAX6 gene mutations in aniridia2016

    • Author(s)
      Yokoi T, Nishina S, Fukami M, Ogata T, Hosono K, Hotta Y, Azuma N.
    • Journal Title

      Human Genome Variation

      Volume: 3 Issue: 1 Pages: 15052-15052

    • DOI

      10.1038/hgv.2015.52

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Novel GUCY2D gene mutations in Japanese male twins with Leber congenital amaurosis2015

    • Author(s)
      Hosono K, Harada Y, Kurata K, Hikoya A, Sato M, Minoshima S, Hotta Y.
    • Journal Title

      J. Ophthalmol.

      Volume: 693468 Pages: 1-10

    • DOI

      10.1155/2015/693468

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] The first USH2A mutation analysis of Japanese autosomal recessive retinitis pigmentosa patients: a totally different mutation profile with the lack of frequent mutations found in Caucasian patients.2014

    • Author(s)
      Yang Zhao, Katsuhiro Hosono, Kimiko Suto, Chie Ishigami, Yuki Arai, Akiko Hikoya, Yasuhiko Hirami, Masafumi Ohtsubo, Shinji Ueno, Hiroko Terasaki, Miho Sato, Hiroshi Nakanishi, Shiori Endo, Kunihiro Mizuta, Hiroyuki Mineta, Mineo Kondo, Masayo Takahashi, Shinsei Minoshima, Yoshihiro Hotta.
    • Journal Title

      J Hum Genet.

      Volume: 59 Issue: 9 Pages: 521-528

    • DOI

      10.1038/jhg.2014.65

    • NAID

      40020198536

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Oligomerization of optineurin and its oxidative stress- or E50K mutation-driven covalent cross-linking: possible relationship with glaucoma pathology.2014

    • Author(s)
      Gao J, Ohtsubo M*, Hotta Y, Minoshima S. (*Corresponding Author)
    • Journal Title

      PlosOne

      Volume: 9(7) Issue: 7 Pages: e101206-e101206

    • DOI

      10.1371/journal.pone.0101206

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] RPGRIP1遺伝子異常によるレーバー先天盲の1家系3症例の臨床像2016

    • Author(s)
      宮道大督、仁科幸子、細野克博、横井匡、倉田健太郎、彦谷明子、蓑島伸生、佐藤美保、深見真紀、堀田喜裕、東範行
    • Organizer
      第55回日本網膜硝子体学会総会
    • Place of Presentation
      東京
    • Year and Date
      2016-12-02
    • Related Report
      2016 Annual Research Report
  • [Presentation] Fine genomic analysis of deletion mutations in the locus control region of OPN1LW/OPN1MW genes in 2 Japanese families with blue cone monochromacy2016

    • Author(s)
      Katsuhiro Hosono, Chunxia Wang, Shu Kachi, Kentaro Kurata, Kimiko Suto, Makoto Nakamura, Hiroko Terasaki, Yozo Miyake, Yoshihiro Hotta, Shinsei Minoshima
    • Organizer
      XXII Biennial Meeting of the International Society for Eye Research
    • Place of Presentation
      東京
    • Year and Date
      2016-09-25
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] A novel homozygous c.636delT mutation in SAG in a Japanese patient with retinal dystrophy2016

    • Author(s)
      Kentaro Kurata, Nobutaka Tachibana, Takahiro Matsuoka, Katuhiro Hosono, Akiko Hikoya, Yuuki Ohashi, Miho Sato, Masayo Takahashi, Yoshihiro Hotta
    • Organizer
      XVIIth International Symposium on Retinal Degeneration
    • Place of Presentation
      京都
    • Year and Date
      2016-09-19
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 次世代シークエンサーを用いたレーバー先天盲の1家系3症例の遺伝子変異解析2016

    • Author(s)
      細野克博、仁科幸子、宮道大督、横井匡、彦谷明子、佐藤美保、蓑島伸生、深見真紀、東範行、堀田喜裕
    • Organizer
      第41回日本小児眼科学会
    • Place of Presentation
      横浜
    • Year and Date
      2016-06-24
    • Related Report
      2016 Annual Research Report
  • [Presentation] 頭位異常を契機に診断したJoubert症候群の一例2016

    • Author(s)
      宇佐美貴寛、鈴木寛子、古森美和、彦谷明子、福田冬季子、堀田喜裕、佐藤美保
    • Organizer
      第41回日本小児眼科学会総会
    • Place of Presentation
      横浜
    • Year and Date
      2016-06-24
    • Related Report
      2016 Annual Research Report
  • [Presentation] 長期間のフォローが可能であった完全型先天停在性夜盲の1例2016

    • Author(s)
      倉田健太郎,細野克博,堀田喜裕
    • Organizer
      第64回日本臨床視覚電気生理学会
    • Place of Presentation
      三重
    • Related Report
      2016 Annual Research Report
  • [Presentation] 前眼部OCTを用いた水平直筋付着部測定についての検討2016

    • Author(s)
      長谷岡宗、新井慎司、稲垣理佐子、鈴木寛子、古森美和、彦谷明子、堀田喜裕、佐藤美保
    • Organizer
      第72回日本弱視斜視学会総会
    • Place of Presentation
      横浜
    • Related Report
      2016 Annual Research Report
  • [Presentation] SAG遺伝子の636delT をホモ接合体で持つ網膜ジストロフィの1例2015

    • Author(s)
      松岡貴大、細野克博、立花信貴、彦谷明子、荒井優気、佐藤美保、高橋 政代、堀田喜裕
    • Organizer
      第69回日本臨床眼科学会
    • Place of Presentation
      名古屋
    • Year and Date
      2015-10-22
    • Related Report
      2015 Research-status Report
  • [Presentation] 全エキソーム解析からHPS6遺伝子異常を同定できた眼白日証の姉妹例2015

    • Author(s)
      宮道大督、朝比奈美輝、中島隼也、佐藤美保、細野克博、野村隆仁、根岸貴志、今川英里、三宅紀子、堀田喜裕、緒方勤、松本直道
    • Organizer
      第69回日本臨床眼科学会
    • Place of Presentation
      名古屋
    • Year and Date
      2015-10-22
    • Related Report
      2015 Research-status Report
  • [Presentation] レーバー先天盲の(二卵性)双生児の次世代シークエンサーを用いた遺伝子変異解析2015

    • Author(s)
      細野克博、佐藤美保、原田祐子、倉田健太郎、彦谷明子、蓑島伸生、堀田喜裕
    • Organizer
      第71回日本弱視斜視学会総会/第40回日本小児眼科学会総会
    • Place of Presentation
      神戸
    • Year and Date
      2015-07-03
    • Related Report
      2015 Research-status Report
  • [Presentation] Visual Outcomes of Japanese Patients with Retinitis Pigmentosa and Usher Syndrome Caused by USH2A Mutations2015

    • Author(s)
      Suto K, Hosono K, Nagase Y, Nakanishi H, Mizuta K, Minoshima S, Hotta Y
    • Organizer
      ARVO 2015
    • Place of Presentation
      Denver
    • Year and Date
      2015-05-03
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] 常染色体劣性網膜色素変性患者におけるEYS遺伝子各エキソンのコピー数変異解析2015

    • Author(s)
      細野克博、蓑島伸生、彦谷明子、佐藤美保、堀田喜裕
    • Organizer
      第119回日本眼科学会総会
    • Place of Presentation
      札幌
    • Year and Date
      2015-04-16
    • Related Report
      2015 Research-status Report
  • [Presentation] A twin with Leber congenital amaurosis possibly caused by the GUCY2D gene mutation2014

    • Author(s)
      Yuko Harada, Katsuhiro Hosono, , Akiko Hikoya, Shinsei Minoshima, Miho Sato, Yoshihiro Hotta
    • Organizer
      AAPOS-JAPO-JASA Joint Meeting
    • Place of Presentation
      京都
    • Year and Date
      2014-11-30 – 2014-12-01
    • Related Report
      2014 Research-status Report
  • [Presentation] 常染色体劣性網膜色素変性の日本人患者におけるUSH2A遺伝子の変異解析2014

    • Author(s)
      堀田喜裕、細野克博、趙洋、須藤希実子、石上智愛、荒井優気、彦谷明子、平見恭彦、大坪正史、上野真治、寺﨑浩子、佐藤美保、中西啓、遠藤志織、水田邦博、峯田周幸、近藤峰生、高橋政代、蓑島伸生
    • Organizer
      日本人類遺伝学会第59回大会・日本遺伝子診療学会第21回大会
    • Place of Presentation
      東京
    • Year and Date
      2014-11-19 – 2014-11-22
    • Related Report
      2014 Research-status Report
  • [Presentation] The first USH2A mutation analysis of Japanese Autosomal Recessive Retinitis Pigmentosa patients: A totally different mutation profile with the lack of frequent mutations found in Caucasian patients2014

    • Author(s)
      Katsuhiro Hosono, Yang Zhao, Kimiko Suto, Chie Ishigami, Yuuki Arai, Akiko Hikoya, Yasuhiko Hirami, Masafumi Ohtsubo, Shinji Ueno, Hiroko Terasaki, Miho Sato, Hiroshi Nakanishi, Shiori Endo, Kunihiro Mizuta, Hiroyuki Mineta, Mineo Kondo, Masayo Takahashi, Shinsei Minoshima, and Yoshihiro Hotta
    • Organizer
      XVIth International Symposium on Retinal Degeneration
    • Place of Presentation
      California
    • Year and Date
      2014-07-13 – 2014-07-18
    • Related Report
      2014 Research-status Report
  • [Presentation] Mutation Analysis of the USH2A Gene in Japanese Patients with Autosomal Recessive Retinitis Pigmentosa2014

    • Author(s)
      Katsuhiro Hosono, Yang Zhao, Chie Ishigami, Shinji Ueno, Hiroshi Nakanishi, Hiroko Terasaki, Mineo Kondo, Masayo Takahashi, Shinsei Minoshima, and Yoshihiro Hotta
    • Organizer
      ARVO2014
    • Place of Presentation
      Orland
    • Year and Date
      2014-05-05 – 2014-05-08
    • Related Report
      2014 Research-status Report
  • [Book] 今日の眼疾患治療指針 遺伝子診断2016

    • Author(s)
      堀田喜裕
    • Total Pages
      4
    • Publisher
      医学書院
    • Related Report
      2016 Annual Research Report
  • [Book] 今日の眼疾患治療指針 中心性輪紋状脈絡膜ジストロフィ2016

    • Author(s)
      堀田喜裕
    • Total Pages
      2
    • Publisher
      医学書院
    • Related Report
      2016 Annual Research Report
  • [Book] 網膜変性疾患診療のすべて 脳回状脈絡膜萎縮2016

    • Author(s)
      堀田喜裕
    • Total Pages
      5
    • Publisher
      医学書院
    • Related Report
      2016 Annual Research Report
  • [Book] RETINA Medicine ゲノムと網膜関連疾患の関与を探る 網膜色素変性2014

    • Author(s)
      堀田喜裕、細野克博
    • Total Pages
      94
    • Publisher
      先端医学社
    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2018-03-22  

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