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Contribution of chemical characteristics of glycopeptide to dynamics of organic matter in the sea

Research Project

Project/Area Number 26550019
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Environmental dynamic analysis
Research InstitutionNational Institute of Advanced Industrial Science and Technology

Principal Investigator

Tsukasaki Ayumi  国立研究開発法人産業技術総合研究所, 環境管理研究部門, 研究員 (40585402)

Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2016: ¥650,000 (Direct Cost: ¥500,000、Indirect Cost: ¥150,000)
Fiscal Year 2015: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2014: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Keywords海洋有機物 / 糖鎖 / ペプチド鎖 / 物質循環
Outline of Final Research Achievements

For better understanding of the dynamics of organic matter in the ocean interior, particulate organic matter (POM) in oceanic surface water is a key material as a starting material in food chain and biological carbon pump. In our previous studies we reported that most of POM existed as glycopeptide. The details of molecular-level structures including sugar chains are unknown. In this study, we applied various chemical fractionation and the electrophoretic separation for sugar chains to the POM samples and tried to clarify chemical characteristics of the glycopeptides. Some band and background were detected on electrophoretogram. The bands were sugar chains with unmodified reduced terminus and consistent with 3-13 glucose polymer. The background sugar chains had broad degree of polymerization. These visible sugar chains accounted for only 1.6% of sugar of POM. It was suggested that most of sugars in POM were large polymers which could not migrate in the gel for the electrophoresis.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (1 results)

All 2016

All Presentation (1 results) (of which Int'l Joint Research: 1 results)

  • [Presentation] Chemical characterization of detrital sugar chains with peptides in oceanic surface particulate organic matter2016

    • Author(s)
      Ayumi Tsukasaki, Tamihito Nishida, Eiichiro Tanoue
    • Organizer
      2016 Ocean Sciences Meeting
    • Place of Presentation
      he Ernest N. Morial Convention Center, New Orleans, USA
    • Year and Date
      2016-02-23
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research

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Published: 2014-04-04   Modified: 2018-03-22  

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