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In vitro selection of novel functional RNAs and peptides by means of natural RNA library

Research Project

Project/Area Number 26560429
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Biomolecular chemistry
Research InstitutionThe University of Tokyo

Principal Investigator

Katoh Takayuki  東京大学, 大学院理学系研究科(理学部), 助教 (90567760)

Project Period (FY) 2014-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2016: ¥1,560,000 (Direct Cost: ¥1,200,000、Indirect Cost: ¥360,000)
Fiscal Year 2015: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2014: ¥780,000 (Direct Cost: ¥600,000、Indirect Cost: ¥180,000)
Keywords機能性ペプチド / 機能性RNA / in vitroセレクション / アゴニスト / マイクロRNA
Outline of Final Research Achievements

We developed a new method for screening novel functional RNAs and peptides that specifically bind to target molecules in cell. Here, we prepared a total RNA library derived from various human tissues, then mixed them with folate molecules covalently immobilized on magnetic beads to isolate folate-binding RNAs. The RNA library was also subjected to in vitro translation to prepare a peptide library, which was then used to screen Keap1 binding peptides by means of mRNA display.

Report

(5 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Research-status Report
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (4 results)

All 2017 2016

All Journal Article (2 results) (of which Peer Reviewed: 2 results,  Open Access: 2 results,  Acknowledgement Compliant: 2 results) Presentation (2 results)

  • [Journal Article] tRid, an enabling method to isolate previously inaccessible small RNA fractions.2016

    • Author(s)
      Kazuki Futai, Naohiro Terasaka, Takayuki Katoh, Hiroaki Suga.
    • Journal Title

      Methods

      Volume: 106 Pages: 105-111

    • DOI

      10.1016/j.ymeth.2016.04.033

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] A human microRNA precursor binding to folic acid discovered by small RNA transcriptomic SELEX.2016

    • Author(s)
      Naohiro Terasaka, Kazuki Futai, Takayuki Katoh, Hiroaki Suga.
    • Journal Title

      RNA

      Volume: 22 Issue: 12 Pages: 1918-1928

    • DOI

      10.1261/rna.057737.116

    • Related Report
      2016 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] 試験管内選択によるヒト内在性タンパク質間相互作用の網羅的探索法の開発2017

    • Author(s)
      矢嶋亮・加藤敬行・菅裕明
    • Organizer
      日本化学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Exploration of human protein-protein or peptide-protein interactions by means of mRNA display.2017

    • Author(s)
      Yajima, R., Hideshima, T., Katoh T., Suga H.
    • Organizer
      日本化学会
    • Related Report
      2017 Annual Research Report

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Published: 2014-04-04   Modified: 2019-03-29  

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