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Design and synthesis of safety-catch caged nucleic acids

Research Project

Project/Area Number 26560452
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Chemical biology
Research InstitutionToho University

Principal Investigator

FURUTA Toshiaki  東邦大学, 理学部, 教授 (90231571)

Project Period (FY) 2014-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2015: ¥1,430,000 (Direct Cost: ¥1,100,000、Indirect Cost: ¥330,000)
Fiscal Year 2014: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywordsケージド化合物 / 光化学 / RNA / プロテアーゼ / ペプチド / ビオチン / ペプチド核酸 / DNA
Outline of Final Research Achievements

The purpose of the study is to develop new caged RNA molecules which can be photochemically activated with cell type specificity. One barrier to using conventional caged compounds in in vivo applications is the lack of cell type specificity or targetability because the compounds are not genetically encoded. To overcome the problems, we designed and synthesized new caged nucleotides which can be photo-activated in the presence of specific enzymes upon 405 nm irradiation. Other types of caging groups having a peptide substrate were synthesized. The group become photoactive after the reaction with endogenously expressed enzymes such as caspase 3. To facilitate the synthesis of appropriately modified caged RNAs, we developed new nucleotide selective caging agents having sequence selectivity. The caging agents have used to prepare caged DNAs and RNAs with sequence selective manner and the resulting caged RNAs can be purified by affinity separation.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • Research Products

    (5 results)

All 2016 2015

All Presentation (5 results) (of which Int'l Joint Research: 1 results,  Invited: 1 results)

  • [Presentation] Development of DNA methyltransferase inhibitors having cell type specificity2016

    • Author(s)
      K. Sakamoto, A. Suzuki, T. Furuta
    • Organizer
      日本化学会 第96春季年会 (2016)
    • Place of Presentation
      同志社大学京田辺キャンパス(京都府・京田辺市)
    • Year and Date
      2016-03-26
    • Related Report
      2015 Annual Research Report
  • [Presentation] Design and synthesis of autophagy inhibitors having cell type specificity2016

    • Author(s)
      S. Takeda, A. Suzuki, T. Furuta
    • Organizer
      日本化学会 第96春季年会 (2016)
    • Place of Presentation
      同志社大学京田辺キャンパス(京都府・京田辺市)
    • Year and Date
      2016-03-26
    • Related Report
      2015 Annual Research Report
  • [Presentation] New caging agent having a PNA tag for sequence selective nucleotide caging2015

    • Author(s)
      W. Hashiba, T. Furuta
    • Organizer
      The International Chemical Congress of Pacific Basin Societies 2015 (Pacifichem 2015)
    • Place of Presentation
      Hawaii (USA)
    • Year and Date
      2015-12-19
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] A new caging agent having a PNA tag for sequence selective nucleotide caging2015

    • Author(s)
      Waka Hashiba, Toshiaki Furuta
    • Organizer
      Pacifichem 2015
    • Place of Presentation
      Honolulu, Hawaii
    • Year and Date
      2015-12-15 – 2015-12-20
    • Related Report
      2014 Research-status Report
  • [Presentation] Chemical tools to control cellular chemistry2015

    • Author(s)
      Toshiaki Furuta
    • Organizer
      第92回 日本生理学会大会
    • Place of Presentation
      神戸国際会議場・展示場(兵庫県神戸市)
    • Year and Date
      2015-03-22
    • Related Report
      2014 Research-status Report
    • Invited

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Published: 2014-04-04   Modified: 2017-05-10  

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