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Origin

Research Project

Project/Area Number 26620013
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Physical chemistry
Research InstitutionYokohama City University

Principal Investigator

Tachikawa Masanori  横浜市立大学, 大学院生命ナノシステム科学研究科, 教授 (00267410)

Co-Investigator(Kenkyū-buntansha) NAGASSHIMA UMPEI  独立行政法人産業技術総合研究所, ナノシステム研究部門, 総括研究主幹 (90164417)
UDAGAWA TARO  岐阜大学, 工学部, 助教 (70509356)
SHIGA MOTOYUKI  日本原子力研究開発機構, システム計算科学センター, 研究員 (40370407)
Co-Investigator(Renkei-kenkyūsha) KITA YUKIUMI  横浜市立大学, 生命ナノシステム科学研究科, 助教 (40453047)
Project Period (FY) 2014-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2015: ¥1,690,000 (Direct Cost: ¥1,300,000、Indirect Cost: ¥390,000)
Fiscal Year 2014: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Keywords水素結合型強誘電体 / 量子多成分系分子理論 / H/D同位体効果 / 四角酸 / 経路積分法 / 多成分系分子理論
Outline of Final Research Achievements

Recently, we have developed some first-principles approaches for quantum multi-component systems including both electrons and nuclei quantum-mechanically: Multi-component molecular orbital (MC_MO), density functional theory (MC_DFT), quantum Monte Carlo (MC_QMC), and ab initio path integral molecular dynamics (PIMD) methods. In our research project, we have improved our quantum multi-component molecular simulation methods for the efficient sampling with parallel computing and have extended our method to much larger systems. We have applied our methods, especially path integral molecular dynamics method, to hydrogen-bonded ferroelectric systems such as squaric acid. We have analyzed nuclear quantum fluctuation, effective potential change, and geometrical H/D isotope effect.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • Research Products

    (40 results)

All 2016 2015 2014 Other

All Journal Article (28 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 28 results,  Acknowledgement Compliant: 22 results,  Open Access: 3 results) Presentation (10 results) (of which Int'l Joint Research: 5 results,  Invited: 8 results) Remarks (2 results)

  • [Journal Article] Analysis of exponent values of Gaussian-type functions on quantum protons and deuterons in charged or polarized systems2016

    • Author(s)
      M. Hashimoto, T. Ishimoto, M. Tachikawa, and T. Udagawa
    • Journal Title

      Int. J. Quant. Chem.

      Volume: in press

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Vibrational analysis on the revised potential energy curve of the low-barrier hydrogen bond in photoactive yellow protein2015

    • Author(s)
      Yusuke Kanematsu, Hironari Kamikubo, Mikio Kataoka, Masanori Tachikawa
    • Journal Title

      Computational and Structural Biotechnology Journal

      Volume: 14 Pages: 16-19

    • DOI

      10.1016/j.csbj.2015.10.003

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Isotope effect on the circular dichroism spectrum of methylα-D-glucopyranoside in aqueous solution2015

    • Author(s)
      Y. Kanematsu, Y. Kamiya, K. Matsuo, K. Gekko, K. Kato, and M. Tachikawa
    • Journal Title

      Scientific Report

      Volume: 5 Issue: 1 Pages: 17900-17900

    • DOI

      10.1038/srep17900

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Theoretical vibrational spectra of OH-(H2O)2: Effect of quantum distribution and vibrational coupling2015

    • Author(s)
      Y. Ogata, Y. Kawashima, K. Takahashi, and M. Tachikawa
    • Journal Title

      Phys. Chem. Chem. Phys.

      Volume: 17 Issue: 38 Pages: 25505-25515

    • DOI

      10.1039/c5cp03632a

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Multicomponent molecular orbital-climbing image-nudged elastic band method to analyze chemical reactions including nuclear quantum effect: Application to hydrogen transfer reaction2015

    • Author(s)
      T. Udagawa, K. Suzuki, and M. Tachikawa
    • Journal Title

      Chem Phys Chem

      Volume: 16 Issue: 15 Pages: 3156-3160

    • DOI

      10.1002/cphc.201500498

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Effects of monohydration on an adenine-thymine base pair2015

    • Author(s)
      S. Watanabe, Y. Ogata, T. Kawatsu, Y. Kawashima, and M. Tachikawa
    • Journal Title

      Theor. Chem. Acc.

      Volume: 134 Issue: 7 Pages: 84-84

    • DOI

      10.1007/s00214-015-1686-7

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] H/D isotope effect on charge-inverted hydrogen-bonded systems: Systematic classification of three different types in H3XH...YH3 (X = C, Si, or Ge, and Y = B, Al, or Ga) with multicomponent calculation2015

    • Author(s)
      T. Udagawa and M. Tachikawa
    • Journal Title

      J. Comput. Chem.

      Volume: 36 Issue: 22 Pages: 1647-1654

    • DOI

      10.1002/jcc.23978

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Performance Test of Multicomponent Quantum Mechanical Calculation with Polarizable Continuum Model for Proton Chemical Shift2015

    • Author(s)
      Y. Kanematsu and M. Tachikawa
    • Journal Title

      J. Phys. Chem. A

      Volume: なし Issue: 20 Pages: 4933-4938

    • DOI

      10.1021/jp512877a

    • Related Report
      2015 Annual Research Report 2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Why does deuterium substitution lead to the contraction of X...Pi distance? Origin of the reverse Ubbelohde effect in XH...Pi interaction2015

    • Author(s)
      T. Udagawa and M. Tachikawa
    • Journal Title

      Theor. Chem. Acc.

      Volume: なし Issue: 3

    • DOI

      10.1007/s00214-015-1633-7

    • Related Report
      2015 Annual Research Report 2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Ferromagnetic spin coupling in the chromium dimer cation: Measurements by photodissociation spectroscopy combined with coupled-cluster calculations2015

    • Author(s)
      K. Egashira, Y. Yamada, Y. Kita, and M. Tachikawa,
    • Journal Title

      J. Chem. Phys.

      Volume: 142 Issue: 5

    • DOI

      10.1063/1.4907197

    • Related Report
      2015 Annual Research Report 2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Quantum simulation for muoniated and deuterated methyl radicals in implicit water solvent: combined ab initio path integral molecular dynamics and the polarizable continuum model simulation study2015

    • Author(s)
      K. Yamada, Y. Kawashima, and M. Tachikawa
    • Journal Title

      Mol. Sim.

      Volume: なし Issue: 10-12 Pages: 832-839

    • DOI

      10.1080/08927022.2014.938070

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Theoretical analysis of geometry and NMR isotope shift in hydrogen-bonding center of photoactive yellow protein by combination of multicomponent quantum mechanics and ONIOM scheme2014

    • Author(s)
      Y. Kanematsu and M. Tachikawa
    • Journal Title

      J. Chem. Phys

      Volume: 141 Issue: 18

    • DOI

      10.1063/1.4900987

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Is the structure of hydroxide dihydrate OH-(H2O)2? : An ab initio path integral molecular dynamics study2014

    • Author(s)
      Y. Ogata, Y. Kawashima, K. Takahashi, and M. Tachikawa
    • Journal Title

      Theor. Chem. Acc.

      Volume: 134 Issue: 1 Pages: 1587-1582

    • DOI

      10.1007/s00214-014-1587-1

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Nuclear quantum effect and temperature dependency on the hydrogen-bonded structure of 7-azaindole dimer2014

    • Author(s)
      N. Kungwana, Y. Ogata, S. Hannongbua, and M. Tachikawa
    • Journal Title

      Theor. Chem. Acc.

      Volume: 133 Issue: 9 Pages: 1553-1562

    • DOI

      10.1007/s00214-014-1553-y

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] H/D isotope effect on structures, binding energies, and basis set superposition errors in F-(H2O)n (n = 1-3) clusters2014

    • Author(s)
      T. Udagawa, T. Ishimoto, and M. Tachikawa
    • Journal Title

      Chem. Phys.

      Volume: 441 Pages: 101-108

    • DOI

      10.1016/j.chemphys.2014.07.014

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Positron-attachment to acetonitrile, acetaldehyde, and acetone molecules: Vibrational enhancement of positron affinities with configuration interaction level of multi-component molecular orbital approach2014

    • Author(s)
      M. Tachikawa
    • Journal Title

      J. Phys.: Conf. Ser.

      Volume: 488 Issue: 1 Pages: 012053-012053

    • DOI

      10.1088/1742-6596/488/1/012053

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Molecular Dynamics Simulations of Self-Assembled Nanocubes in Methanol2014

    • Author(s)
      T. Mashiko, K. Yamada, S. Hiraoka, U. Nagashima, and M. Tachikawa
    • Journal Title

      Molecular Simulation

      Volume: - Issue: 10-12 Pages: 845-849

    • DOI

      10.1080/08927022.2014.940523

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Theoretical prediction of the binding of a positron to a formaldehyde molecule using a first-principles calculation2014

    • Author(s)
      Yurika Yamada, Yukiumi Kita, and Masanori Tachikawa
    • Journal Title

      Phys. Rev. A

      Volume: 89, 062711 Issue: 6 Pages: 5-5

    • DOI

      10.1103/physreva.89.062711

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Multi-component molecular orbital study on positron attachment to alkali-metal hydride molecules: nature of chemical bonding and dissociation limits of [LiH; e+]2014

    • Author(s)
      T. Oyamada and M. Tachikawa
    • Journal Title

      Eur. Phys. J. D

      Volume: 68 Issue: 8 Pages: 231-239

    • DOI

      10.1140/epjd/e2014-40708-4

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Electron-nucleus correlation functional for multi-component density functional theory2014

    • Author(s)
      T. Udagawa, T. Tsuneda, and M. Tachikawa
    • Journal Title

      Phys. Rev. A

      Volume: 89 Issue: 5

    • DOI

      10.1103/physreva.89.052519

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Development of multicomponent hybrid density functional theory with polarizable continuum model for the analysis of nuclear quantum effect and solvent effect on NMR chemical shift2014

    • Author(s)
      Y. Kanematsu and M. Tachikawa
    • Journal Title

      J. Chem. Phys.

      Volume: 140 Issue: 16

    • DOI

      10.1063/1.4872006

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Accurate Prediction of Hyperfine Coupling Constant in Muoniated and Hydrogenated Ethyl Radicals: Ab Initio Path Integral Simulation Study with Density Functional Theory Method2014

    • Author(s)
      K. Yamada, Y. Kawashima, M. Tachikawa
    • Journal Title

      J. Chem. Theory. Comput.

      Volume: 10 Issue: 5 Pages: 2005-2015

    • DOI

      10.1021/ct500027z

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Theoretical investigation of the binding of a positron to vibrational excited states of hydrogen cyanide molecule2014

    • Author(s)
      Yukiumi Kita and Masanori Tachikawa
    • Journal Title

      Euro. Phys. J. D

      Volume: 68, 116 Issue: 5 Pages: 7-7

    • DOI

      10.1140/epjd/e2014-40799-9

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Quantum Monte Carlo and high-level ab initio molecular orbital investigation of dissociation channels of the positronic alkali-metal hydrides, [XH;e+] (X= Li, Na, and K)2014

    • Author(s)
      Yurika Yamada, Yukiumi Kita, Masanori Tachikawa, Mike D. Towler, and Richard J. Needs
    • Journal Title

      Euro. Phys. J. D

      Volume: 68 Issue: 3 Pages: 6-6

    • DOI

      10.1140/epjd/e2014-40734-2

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Theoretical investigation of a positron binding to an aspartame molecule using the ab initio multicomponent molecular orbital approach2014

    • Author(s)
      Y. Oba and M. Tachikawa
    • Journal Title

      Int. J. Quant. Chem.

      Volume: 114 Issue: 17 Pages: 1146-1149

    • DOI

      10.1002/qua.24641

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] An Ab Initio Path Integral Molecular Dynamics Study of the Nuclear Quantum Effect on Out-of-plane Ring Deformation of Hydrogen2014

    • Author(s)
      Y. Kawashima, M. Tachikawa
    • Journal Title

      J. Chem. Theory Comp.

      Volume: 10 Issue: 1 Pages: 153-163

    • DOI

      10.1021/ct4007986

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Why is N...Be distance of NH3H+...DBeH shorter than that of NH3D+...HBeH? Paradoxical geometrical isotope effects for partially isotope-substituted dihydrogen-bonded isotopomers2014

    • Author(s)
      T. Udagawa and M. Tachikawa
    • Journal Title

      J. Comput. Chem. (Communication)

      Volume: 35 Issue: 4 Pages: 271-274

    • DOI

      10.1002/jcc.23505

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Muon-Electron Hyperfine Coupling Constants of Muoniated Ethyl Radical: a Path Integral Simulation Study with Semiempirical Molecular Orbital Method2014

    • Author(s)
      K. Yamada, Y. Kawashima, and M. Tachikawa
    • Journal Title

      Chin. J. Phys.

      Volume: 52 Pages: 126-137

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] Path integral simulation on muoniated radicals2016

    • Author(s)
      Masanori Tachikawa
    • Organizer
      The International Conference of Computational Methods in Sciences andEngineering (ICCMSE 2016)
    • Place of Presentation
      Athens, Greece
    • Year and Date
      2016-03-17
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Path integral simulation on muoniated acetone radical2016

    • Author(s)
      Masanori Tachikawa
    • Organizer
      Seventh Asia-Pacific Conference of Theoretical and Computational Chemistry (APCTCC7)
    • Place of Presentation
      Kaohsiung, Taiwan
    • Year and Date
      2016-01-25
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Path integral simulation on muoniated acetone radical2016

    • Author(s)
      Masanori Tachikawa
    • Organizer
      International USMM &CMSI Workshop
    • Place of Presentation
      Hongo, Tokyo
    • Year and Date
      2016-01-05
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Quantum Monte Carlo calculation of Positron-attached Polyatomic Molecules2015

    • Author(s)
      Masanori Tachikawa
    • Organizer
      The International Chemical Congress of Pacific Basin Societies 2015 (PACIFICHEM 2015)
    • Place of Presentation
      Honolulu, Hawaii, USA
    • Year and Date
      2015-12-15
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] First-principles Calculation for Positron Binding to Molecules2015

    • Author(s)
      Masanori Tachikawa
    • Organizer
      6th JCS, International Symposium on Theoretical Chemistry
    • Place of Presentation
      Smolenice Castle, Slovakia
    • Year and Date
      2015-10-11
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Positron-attachment to small molecules : Vibrational enhancement of positron affinities with configuration interaction level of multi-component molecular orbital approach2015

    • Author(s)
      Masanori Tachikawa
    • Organizer
      The International Conference of Computational Methods in Sciences and Engineering 2015 (ICCMSE 2015)
    • Place of Presentation
      Athens, Greece, Metropolitan
    • Year and Date
      2015-03-20 – 2015-03-23
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] First-principles calculation for positron binding to molecules2014

    • Author(s)
      Masanori Tachikawa
    • Organizer
      XIXth Quantum Systems in Chemistry, Physics and Biology (QSCP2014)
    • Place of Presentation
      Tamsui, Taipei, Taiwan
    • Year and Date
      2014-11-11 – 2014-11-17
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] First-principles calculation for positron binding to molecules2014

    • Author(s)
      Masanori Tachikawa
    • Organizer
      10th Congress of the World Association of Theoretical and Computational Chemists (WATOC2014)
    • Place of Presentation
      Santiago, Chile
    • Year and Date
      2014-10-07 – 2014-10-11
    • Related Report
      2014 Research-status Report
  • [Presentation] First-principles calculation for positron binding to molecules2014

    • Author(s)
      Masanori Tachikawa
    • Organizer
      9th Congress on Electronic Structure: Principles and Applications. ESPA 2014
    • Place of Presentation
      Badajoz,Spain
    • Year and Date
      2014-07-02 – 2014-07-04
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] Multi-component molecular theory for hydrogen-bonded systems and positronic compounds2014

    • Author(s)
      Masanori Tachikawa
    • Organizer
      5th French-Japanese Workshop on Computational Methods in Chemistry
    • Place of Presentation
      Strasbourg, France
    • Year and Date
      2014-06-30 – 2014-07-01
    • Related Report
      2014 Research-status Report
    • Invited
  • [Remarks] 横浜市立大学量子物理化学研究室(立川研究室)

    • URL

      http://www-user.yokohama-cu.ac.jp/~tachi/

    • Related Report
      2015 Annual Research Report
  • [Remarks] 横浜市立大学 立川研究室

    • URL

      http://www-user.yokohama-cu.ac.jp/~tachi/

    • Related Report
      2014 Research-status Report

URL: 

Published: 2014-04-04   Modified: 2017-05-10  

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