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Development of an analysis system of infrared spectroscopy for membrane proteins under existence of membrane potential

Research Project

Project/Area Number 26640047
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Neurochemistry/Neuropharmacology
Research InstitutionInstitute for Molecular Science

Principal Investigator

FURUTANI Yuji  分子科学研究所, 生命・錯体分子科学研究領域, 准教授 (80432285)

Research Collaborator TAKADA Noriko  分子科学研究所, 装置開発室
AOYAMA Masaki  分子科学研究所, 装置開発室
MIZUTANI Nobuo  分子科学研究所, 装置開発室
KONDO Takuhiko  分子科学研究所, 装置開発室
Project Period (FY) 2014-04-01 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2016: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2015: ¥910,000 (Direct Cost: ¥700,000、Indirect Cost: ¥210,000)
Fiscal Year 2014: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywords膜タンパク質 / 膜電位 / 赤外分光法 / イオンチャネル / 生物物理
Outline of Final Research Achievements

Effect of membrane potential on the structure and dynamics of membrane proteins must be important for elucidating their molecular mechanisms such as generation of action potential in a nerve cell. In this study, we aimed to develop a new technique of infrared spectroscopy for analyzing changes in a protein structure and its internal hydrogen bonds under the membrane potential. Surface-enhancement of infrared absorption and reconstitution of membrane proteins have been examined. We obtained several results useful for conducting infrared spectroscopy on membrane proteins under existence of the membrane potential in future.

Report

(4 results)
  • 2016 Annual Research Report   Final Research Report ( PDF )
  • 2015 Research-status Report
  • 2014 Research-status Report
  • Research Products

    (38 results)

All 2017 2016 2015 2014 Other

All Int'l Joint Research (4 results) Journal Article (12 results) (of which Int'l Joint Research: 3 results,  Peer Reviewed: 12 results,  Open Access: 6 results,  Acknowledgement Compliant: 1 results) Presentation (16 results) (of which Int'l Joint Research: 5 results,  Invited: 13 results) Book (2 results) Remarks (4 results)

  • [Int'l Joint Research] トロント大学(カナダ)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] バレンシア大学(スペイン)

    • Related Report
      2016 Annual Research Report
  • [Int'l Joint Research] トロント大学(カナダ)

    • Related Report
      2015 Research-status Report
  • [Int'l Joint Research] バレンシア大学(スペイン)

    • Related Report
      2015 Research-status Report
  • [Journal Article] Structural insights into the nucleotide base specificity of P2X receptors.2017

    • Author(s)
      Kasuya G, Fujiwara Y, Tsukamoto H, Morinaga S, Ryu S, Touhara K, Ishitani R, Furutani Y, Hattori M, Nureki O.
    • Journal Title

      Sci Rep.

      Volume: 7 Issue: 1 Pages: 45208-45208

    • DOI

      10.1038/srep45208

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Simple and Rapid Fabrication of PDMS Microfluidic Devices Compatible with FTIR Microspectroscopy2016

    • Author(s)
      Monpichar Srisa-Art and Yuji Furutani
    • Journal Title

      Bull. Chem. Soc. Jpn.

      Volume: 89 Issue: 2 Pages: 195-202

    • DOI

      10.1246/bcsj.20150357

    • NAID

      130005125593

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Live-cell single-molecule imaging of the cytokine receptor MPL for analysis of dynamic dimerization2016

    • Author(s)
      Akihiko Sakamoto, Takashi Tsukamoto, Yuji Furutani, Yuki Sudo, Kazuyuki Shimada, Akihiro Tomita, Hitoshi Kiyoi, Takashi Kato and Takashi Funatsu
    • Journal Title

      J. Mol. Cell Biol.

      Volume: 印刷中

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] 光誘起赤外差分光法による微生物型ロドプシンのイオン輸送機構の研究2016

    • Author(s)
      古谷祐詞
    • Journal Title

      日本レーザー医学会誌

      Volume: 36 Pages: 460-465

    • NAID

      130005966857

    • Related Report
      2015 Research-status Report
    • Peer Reviewed
  • [Journal Article] Chimeras of Channelrhodopsin-1 and -2 from Chlamydomonas reinhardtii Exhibit Distinctive Light-induced Structural Changes from Channelrhodopsin-2.2015

    • Author(s)
      Asumi Inaguma, Hisao Tsukamoto, Hideaki E. Kato, Tetsunari Kimura, Toru Ishizuka, Satomi Oishi, Hiromu Yawo, Osamu Nureki, Yuji Furutani
    • Journal Title

      J. Biol. Chem.

      Volume: 290 Issue: 18 Pages: 11623-11634

    • DOI

      10.1074/jbc.m115.642256

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Specific interactions between alkali metal cations and the KcsA channel studied using ATR-FTIR spectroscopy2015

    • Author(s)
      Y. Furutani, H. Shimizu, Y. Asai, S. Oiki, H. Kndori
    • Journal Title

      Biophysics and Physicobiology

      Volume: 12 Issue: 0 Pages: 37-45

    • DOI

      10.2142/biophysico.12.0_37

    • NAID

      130005098800

    • ISSN
      2189-4779
    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] New insights into metal ion-crown ether complexes revealed by SEIRA spectroscopy2015

    • Author(s)
      Yoshiya Inokuchi, Takayuki Ebata, Toshiaki Ikeda, Takeharu Haino, Tetsunari Kimura, Hao Guo, Yuji Furutani
    • Journal Title

      New Journal of Chemistry

      Volume: 39 Issue: 11 Pages: 8673-8680

    • DOI

      10.1039/c5nj01787d

    • NAID

      120005829506

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] Retinal attachment instability is diversified among mammalian melanopsins2015

    • Author(s)
      H. Tsukamoto, Y. Kubo, D.L. Farrens, M. Koyanagi, A. Terakita, Y. Furutani
    • Journal Title

      The Journal of Biological Chemistry

      Volume: 290 Issue: 45 Pages: 27176-27187

    • DOI

      10.1074/jbc.m115.666305

    • Related Report
      2015 Research-status Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Infrared spectroscopic studies on the V-ATPase2015

    • Author(s)
      H. Kandori*, Y. Furutani, T. Murata
    • Journal Title

      Biochim. Biophys Acta

      Volume: 1847 Issue: 1 Pages: 134-141

    • DOI

      10.1016/j.bbabio.2014.07.020

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] Self-assembly of the chaperonin GroEL nanocage induced at submicellar detergent2014

    • Author(s)
      Jin Chen, Hisashi Yagi, Yuji Furutani, Takashi Nakamura, Asumi Inaguma, Hao Guo, Yan Kong, Yuji Goto
    • Journal Title

      Scientific Reports

      Volume: 4 Issue: 1 Pages: 5614-5614

    • DOI

      10.1038/srep05614

    • NAID

      120006557631

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access
  • [Journal Article] "Hydrogen-bonding changes of internal water molecules upon the actions of microbial rhodopsins studied by FTIR spectroscopy "2014

    • Author(s)
      Y. Furutani, H. Kandori
    • Journal Title

      Biochim. Biophys. Acta

      Volume: 1837 Issue: 5 Pages: 598-605

    • DOI

      10.1016/j.bbabio.2013.09.004

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Journal Article] 赤外分光法による膜タンパク質の分子機構研究2014

    • Author(s)
      古谷祐詞
    • Journal Title

      Molecular Science

      Volume: 8

    • NAID

      130004688035

    • Related Report
      2014 Research-status Report
    • Peer Reviewed
  • [Presentation] Amide I vibrations could be fingerprints of ion-protein interactions of potassium ion channels with alkali metal cations2016

    • Author(s)
      Yuji Furutani and Hisao Tsukamoto
    • Organizer
      The 9th Korea-Japan Seminars on Biomolecular Sciences: Experiments and Simulations
    • Place of Presentation
      Commodore Hotel, Gyeongju, Korea
    • Year and Date
      2016-11-16
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] PDMSマイクロ流路を用いた電気化学計測と可視・赤外分光法の融合的アプローチ2016

    • Author(s)
      古谷祐詞、Akkapol Suea-Ngam
    • Organizer
      第10回分子科学討論会
    • Place of Presentation
      神戸ファッションマート(兵庫県神戸市)
    • Year and Date
      2016-09-15
    • Related Report
      2016 Annual Research Report
  • [Presentation] オプトジェネティクスで活躍する微生物型ロドプシンの分子機構研究2016

    • Author(s)
      古谷祐詞
    • Organizer
      生化学若い研究者の会 第56回生命科学夏の学校
    • Place of Presentation
      旅館かつら(宮城県白石市)
    • Year and Date
      2016-08-26
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] 赤外分光計測によるカリウムチャネルのイオン選択機構の研究2016

    • Author(s)
      古谷祐詞
    • Organizer
      第1回イオンチャネル研究会~チャネルどんたく~
    • Place of Presentation
      福岡大学病院(福岡県福岡市)
    • Year and Date
      2016-07-07
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Molecular Mechanisms of Retinal Proteins with Involvement of Water Molecules Studied by Light-Induced Difference Infrared Spectroscopy2016

    • Author(s)
      Yuji Furutani
    • Organizer
      26th IUPAC International Symposium on Photochemistry
    • Place of Presentation
      Osaka City Central Public Hall (Osaka, Osaka Pref.)
    • Year and Date
      2016-04-05
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Ion-Protein Interactions between a Potassium Channel and Alkali Metal Cations Studied by ATR-FTIR Spectroscopy2016

    • Author(s)
      Yuji Furutani
    • Organizer
      60th Annual Meeting of Biophysical Society (selected as a Platform Talk)
    • Place of Presentation
      Los Angeles, California, USA
    • Year and Date
      2016-03-01
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research
  • [Presentation] The molecular mechanisms of ion channel proteins studied by stimulus-induced difference FT-IR spectroscopy2016

    • Author(s)
      Yuji Furutani
    • Organizer
      Pure and Applied Chemistry International Conference (PCCON) 2016, The 4th CU-IMS Symposium
    • Place of Presentation
      Bangkok, Thailand
    • Year and Date
      2016-02-10
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] 赤外分光法によるレチナールタンパク質の機能発現機構の解明2015

    • Author(s)
      古谷祐詞
    • Organizer
      第29回カロテノイド研究談話会
    • Place of Presentation
      東京都八王子市(首都大学東京)
    • Year and Date
      2015-09-04
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] Infrared Difference Spectroscopy is a Key Technique for Deciphering the Molecular Mechanisms of Ion Pump and Channel Proteins2015

    • Author(s)
      Yuji Furutani
    • Organizer
      OIIB (Okazaki Institute for Integrative Bioscience) Summer School 2015
    • Place of Presentation
      愛知県岡崎市(岡崎コンファレンスセンター)
    • Year and Date
      2015-08-13
    • Related Report
      2015 Research-status Report
    • Int'l Joint Research / Invited
  • [Presentation] イオンチャネルの分子機構解明への赤外分光解析による挑戦2015

    • Author(s)
      古谷祐詞
    • Organizer
      分子研研究会「膜タンパク質内部のプロトン透過を考える」
    • Place of Presentation
      愛知県岡崎市(岡崎コンファレンスセンター)
    • Year and Date
      2015-04-20
    • Related Report
      2015 Research-status Report
    • Invited
  • [Presentation] Structural Changes of Membrane Proteins Studied by Difference FTIR Spectroscopy; Microbial Rhodopsins and Potassium Ion Channels2014

    • Author(s)
      Yuji Furutani
    • Organizer
      16th International Conference on Retinal Proteins
    • Place of Presentation
      Nagahama Royal Hotel, Nagahama, Shiga
    • Year and Date
      2014-10-05 – 2014-10-10
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] ATR-FTIR spectroscopic analyses of interaction modes underlying unique ion selectivity of a two-pore domain potassium channel TWIK-12014

    • Author(s)
      Hisao Tsukamoto, Koichi Nakajo, Yoshihiro Kubo, Yuji Furutani
    • Organizer
      The 52nd Annual Meeting of the Biophysical Society of Japan (BSJ2014)
    • Place of Presentation
      Sapporo Convention Center, Sapporo, Hokkaido
    • Year and Date
      2014-09-25 – 2014-09-27
    • Related Report
      2014 Research-status Report
  • [Presentation] 赤外分光法による膜タンパク質の動作機構研究2014

    • Author(s)
      古谷祐詞
    • Organizer
      第8回分子科学討論会 奨励賞受賞講演
    • Place of Presentation
      広島県東広島市(広島大学)
    • Year and Date
      2014-09-24
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] 赤外分光法による膜タンパク質研究2014

    • Author(s)
      古谷祐詞
    • Organizer
      岡山大学大学院医歯薬学総合研究科 第3回生体物理化学セミナー
    • Place of Presentation
      岡山県岡山市(岡山大学)
    • Year and Date
      2014-09-19
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] 赤外分光法による膜タンパク質の動作機構研究2014

    • Author(s)
      古谷祐詞
    • Organizer
      大阪大学生命機能研究科 FBSコロキウム
    • Place of Presentation
      大阪府吹田市(大阪大学)
    • Year and Date
      2014-06-18
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] Protein-ion interactions of membrane proteins studied by Fourier-transform infrared spectroscopy2014

    • Author(s)
      Yuji Furutani
    • Organizer
      18th East Asian Workshop on Chemical Dynamics
    • Place of Presentation
      Busan, Republic of Korea
    • Year and Date
      2014-05-19 – 2014-05-21
    • Related Report
      2014 Research-status Report
    • Invited
  • [Book] 光と生命の事典1(「75 菌類のロドプシン」、第3章光の情報利用 3.1 光環境応答)2016

    • Author(s)
      古谷祐詞
    • Total Pages
      422
    • Publisher
      朝倉書店
    • Related Report
      2015 Research-status Report
  • [Book] Optogenetics -Light-Sensing Proteins and Their Applications- (Chapter 5 "Molecular Mechanisms for Ion Transportation of Microbial Rhodopsins Studied by Light-Induced Difference FTIR Spectroscopy")2015

    • Author(s)
      Yuji Furutani
    • Total Pages
      409
    • Publisher
      Springer
    • Related Report
      2015 Research-status Report
  • [Remarks] 分子科学研究所生命・錯体分子科学研究領域生体分子情報研究部門 准教授 古谷祐詞

    • URL

      https://groups.ims.ac.jp/organization/furutani_g/index.html

    • Related Report
      2016 Annual Research Report
  • [Remarks] 分子科学研究所 生命・錯体分子科学研究領域 生体分子情報研究部門 准教授 古谷祐詞

    • URL

      https://groups.ims.ac.jp/organization/furutani_g/

    • Related Report
      2015 Research-status Report
  • [Remarks] 分子科学研究所 研究者詳細 准教授 古谷 祐詞

    • URL

      https://www.ims.ac.jp/research/assoc/furutani.html

    • Related Report
      2014 Research-status Report
  • [Remarks] 分子科学研究所 生命・錯体分子科学研究領域 生体分子情報研究部門 准教授 古谷 祐詞

    • URL

      http://groups.ims.ac.jp/organization/furutani_g/

    • Related Report
      2014 Research-status Report

URL: 

Published: 2014-04-04   Modified: 2018-03-22  

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