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Elucidation of the inhibitory mechanism of a lysine deacetylase Siruin by endogenous metabolites

Research Project

Project/Area Number 26650011
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Molecular biology
Research InstitutionInstitute of Physical and Chemical Research

Principal Investigator

Ito Akihiro  国立研究開発法人理化学研究所, 吉田化学遺伝学研究室, 専任研究員 (40391859)

Co-Investigator(Renkei-kenkyūsha) Moto Kenichi  国立研究開発法人理化学研究所, 小林脂質生物学研究室, 専任研究員 (90333335)
Kudo Norio  国立研究開発法人理化学研究所, 環境資源科学研究センター, 研究員 (80632421)
Project Period (FY) 2014-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥4,030,000 (Direct Cost: ¥3,100,000、Indirect Cost: ¥930,000)
Fiscal Year 2015: ¥2,210,000 (Direct Cost: ¥1,700,000、Indirect Cost: ¥510,000)
Fiscal Year 2014: ¥1,820,000 (Direct Cost: ¥1,400,000、Indirect Cost: ¥420,000)
KeywordsSirtuin / 代謝物質 / アセチル化 / SIRT2 / サーチュイン
Outline of Final Research Achievements

Sirtuins possess NAD-dependent deacetylase activity and is involved in diverse biological processes including aging. The enzymatic activity of sirtuins is known to be regulated by cellular NAD/NADH ratio. However, endogenous inhibitors for sirtuins have not been identified yet. Here, we identified N-acyldopamines as endogenous SIRT2 inhibitors. We found that a number of N-acyldopamine species including N-palmitoyldopamine inhibit both in vitro and in vivo SIRT2 activity. In addition, X-ray crystallographic analysis of the SIRT2―N-palmitoyldopamine complex revealed the molecular mechanism by which N-acyldopamines inhibit the SIRT2 activity.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • Research Products

    (8 results)

All 2016 2015 2014

All Journal Article (3 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 3 results,  Open Access: 1 results) Presentation (4 results) (of which Int'l Joint Research: 1 results,  Invited: 2 results) Book (1 results)

  • [Journal Article] Efficient N-Acyldopamine Synthesis2016

    • Author(s)
      Matsumoto Y, Ito A, Uesugi M, Kittaka A
    • Journal Title

      Chem. Pharm. Bull.

      Volume: in press

    • NAID

      130005160071

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The subcellular localization and activity of cortactin is regulated by acetylation and interaction with Keap12015

    • Author(s)
      Ito A, Shimazu T, Maeda S, Shah AA, Tsunoda T, Iemura S, Natsume T, Suzuki T, Motohashi H, Yamamoto M, Yoshida M.
    • Journal Title

      Science Signaling.

      Volume: 8 Issue: 404 Pages: 404-404

    • DOI

      10.1126/scisignal.aad0667

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Kinetic and structural basis for acyl-group selectivity and NAD(+) dependence in sirtuin-catalyzed deacylation2015

    • Author(s)
      Feldman, J. L., Dittenhafer-Reed, K. E., Kudo, N., Thelen, J. N., Ito, A., Yoshida, M., and Denu, J. M.
    • Journal Title

      Biochemistry

      Volume: 54 Issue: 19 Pages: 3037-3050

    • DOI

      10.1021/acs.biochem.5b00150

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Presentation] Novel functions of lipid metabolites as endogenous SIRT2 inhibitors2016

    • Author(s)
      Akihiro Ito,, Norio Kudo, Akiko Nakata, Satoko Maeda, Minoru Yoshida
    • Organizer
      The 8th Korea-Japan Chemical Biology Symposium
    • Place of Presentation
      Pacific Hotel Okinawa, Naha, Okinawa
    • Year and Date
      2016-01-19
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] NAD依存性脱アセチル化酵素SIRT2による細胞運動制御機構とその内因性阻害物質2015

    • Author(s)
      伊藤昭博、吉田 稔
    • Organizer
      第2回北陸エピジェネティクス研究会
    • Place of Presentation
      富山大学、富山市、富山県
    • Year and Date
      2015-11-11
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] NAD依存的脱アセチル化酵素SIRT2による細胞運動制御機構2015

    • Author(s)
      伊藤昭博、前田里子、吉田稔
    • Organizer
      日本薬学会第135年会
    • Place of Presentation
      神戸学院大学(兵庫県神戸市)
    • Year and Date
      2015-03-26
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] SIRT2 regulates cell migration through Keap1-mediated cell periphery localization of cortactin2014

    • Author(s)
      Akihiro Ito, Satoko Maeda, Minoru Yoshida
    • Organizer
      Max Planck Joint Research Center for Systems Chemical Biology 3rd Annual Symposium
    • Place of Presentation
      Schloss Ringberg, Kreuth, Germany
    • Year and Date
      2014-05-23
    • Related Report
      2014 Research-status Report
  • [Book] 「NAD+関連タンパク質」、生体の化学 [増大特集]細胞シグナル操作方法2015

    • Author(s)
      伊藤昭博、八代田陽子、吉田稔
    • Publisher
      医学書院
    • Related Report
      2015 Annual Research Report

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Published: 2014-04-04   Modified: 2017-05-10  

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