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Studies on metabolic pathway of free oligosaccharides generated in the ER lumen

Research Project

Project/Area Number 26650040
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Functional biochemistry
Research InstitutionKagoshima University (2015)
The Institute of Physical and Chemical Research (2014)

Principal Investigator

Harada Yoichiro  鹿児島大学, 医歯(薬)学総合研究科, 特任准教授 (80464147)

Project Period (FY) 2014-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2015: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2014: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywords小胞体 / アスパラギン結合型糖鎖 / 遊離糖鎖 / 代謝 / 輸送
Outline of Final Research Achievements

In buddin yeast, oligosaccharyltransferase generates free oligosaccharides (fOSs) by degrading dolichol-linked oligosaccharides in the lumen of the endoplasmic reticulum. Although it has been known that fOSs are transported into the cytosol and catabolized by the cytosol/vacuolar mannosidase, the molecular mechanism underlying the fOS catabolism remains largely elusive. Here we used non-essential gene knockout collection of budding yeast to screen genes involved in fOS catabolism and found that the knockout of HRD1 results in the two-fold increase in the amounts of fOSs. This result strongly indicate that HRD1 is involved in the catabolism of fOSs.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • Research Products

    (11 results)

All 2016 2015 2014

All Journal Article (6 results) (of which Peer Reviewed: 6 results,  Acknowledgement Compliant: 4 results,  Open Access: 1 results) Presentation (5 results) (of which Invited: 2 results)

  • [Journal Article] Non-lysosomal degradation of phophorylated oligosaccharides is initiated by the cytosolic endo-beta-N-acetylglucosaminidase.2016

    • Author(s)
      Y. Harada, C Huang, S. Yamaki, N. Dohmae, and T. Suzuki
    • Journal Title

      J. Biol. Chem.

      Volume: 291 Issue: 15 Pages: 8048-8058

    • DOI

      10.1074/jbc.m115.685313

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Cytosolic-free oligosaccharides are predominantly generated by the degradation of dolichol-linked oligosaccharides in mammalian cells.2015

    • Author(s)
      Y. Harada, Y. Masahara-Negishi, and T. Suzuki.
    • Journal Title

      Glycobiology

      Volume: 25 Issue: 11 Pages: 1196-1205

    • DOI

      10.1093/glycob/cwv055

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Endo-β-N-acetylglucosaminidase forms N-GlcNAc protein aggregates during ER-associated degradation in Ngly1-defective cells.2015

    • Author(s)
      Chengcheng Huang, Yoichiro Harada, Akira Hosom, Yuki Masahara-Negishi, Junichi Seino, Haruhiko Fujihira, Yoko Funakoshi, Takehiro Suzuki, Naoshi Dohmae, Tadashi Suzuki
    • Journal Title

      Proc. Natl. Acad. Sci. USA

      Volume: 112 Issue: 5 Pages: 1398-1403

    • DOI

      10.1073/pnas.1414593112

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Generation and degradation of free asparagine-linked glycans.2015

    • Author(s)
      Yoichiro Harada, Hiroto Hirayama, and Tadashi Suzuki
    • Journal Title

      Cell Mol. Life Sci.

      Volume: NA Issue: 13 Pages: 2509-2533

    • DOI

      10.1007/s00018-015-1881-7

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Non-lysosomal degradation pathway for N-linked glycans and dolichol linked oligosaccharides2014

    • Author(s)
      Tadashi Suzuki and Yoichiro Harada
    • Journal Title

      Biochem. Biophys. Res. Commun.

      Volume: 453 Issue: 2 Pages: 213-219

    • DOI

      10.1016/j.bbrc.2014.05.075

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Interaction of 70-kDa heat shock protein with glycosaminoglycans and acidic glycopolymers2014

    • Author(s)
      Yoichiro Harada, Estelle Garenaux, Takehiro Nagatsuka, Hirotaka Uzawa, Yoshihiro Nishida, Chihiro Sato, Ken Kitajima
    • Journal Title

      Biochem. Biophys. Res. Communication

      Volume: 453 Issue: 2 Pages: 229-234

    • DOI

      10.1016/j.bbrc.2014.05.137

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] Metabolically programmed quality control system for dolichol-linked oligosaccharides2014

    • Author(s)
      Harada Y, Nakajima K, Masahara-Negishi Y, Freeze HH, Angata T, Taniguchi N, Suzuki T.
    • Organizer
      2014 SFG and JSCR joint meeting, Satellite symposium IV
    • Place of Presentation
      Hilton Hawaiian Village, Hawaii
    • Year and Date
      2014-11-16 – 2014-11-19
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] PNGase-independent formation of free oligosaccharides is predominant in mammalian cells2014

    • Author(s)
      Harada Y, Masahara-Negishi Y, Suzuki T.
    • Organizer
      2014 SFG and JSCR joint meeting, Satellite symposium II
    • Place of Presentation
      Hilton Hawaiian Village, Hawaii
    • Year and Date
      2014-11-16 – 2014-11-19
    • Related Report
      2014 Research-status Report
  • [Presentation] Metabolically programmed quality control system for dolichol-linked oligosaccharides2014

    • Author(s)
      Harada Y, Nakajima K, Masahara-Negishi Y, Freeze HH, Angata T, Taniguchi N, Suzuki T.
    • Organizer
      2014 SFG and JSCR joint meeting
    • Place of Presentation
      Hilton Hawaiian Village, Hawaii
    • Year and Date
      2014-11-16 – 2014-11-19
    • Related Report
      2014 Research-status Report
  • [Presentation] Degradation of aberrant dolichol-linked oligosaccharides by a putative pyrophosphatase2014

    • Author(s)
      Harada Y, Suzuki T.
    • Organizer
      日本生化学会
    • Place of Presentation
      国立京都国際会館、京都
    • Year and Date
      2014-10-15 – 2014-10-18
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] グルコース飢餓によって誘導されるドリコールオリゴ糖の未成熟分解の発見とその分子機構の解明に向けて2014

    • Author(s)
      原田 陽一郎、鈴木 匡
    • Organizer
      日本糖質学会
    • Place of Presentation
      名古屋大学、名古屋
    • Year and Date
      2014-08-10 – 2014-08-12
    • Related Report
      2014 Research-status Report

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Published: 2014-04-04   Modified: 2017-05-10  

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