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Elucidation of a chromosome evolution mechanism through the control of transposon

Research Project

Project/Area Number 26650124
Research Category

Grant-in-Aid for Challenging Exploratory Research

Allocation TypeMulti-year Fund
Research Field Genetics/Chromosome dynamics
Research InstitutionOsaka University

Principal Investigator

ISHII Kojiro  大阪大学, 生命機能研究科, 特任准教授(常勤) (40360276)

Project Period (FY) 2014-04-01 – 2016-03-31
Project Status Completed (Fiscal Year 2015)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2015: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Fiscal Year 2014: ¥1,950,000 (Direct Cost: ¥1,500,000、Indirect Cost: ¥450,000)
Keywordsゲノム / 染色体 / トランスポゾン / セントロメア
Outline of Final Research Achievements

As an interspersed repetitive element throughout the genome, transposon has been known to cause various changes in chromosome configuration. We previously found an indirect evidence that that such changes in fission yeast is given through a canonical, stress-induced cellular program. Here we analyzed the control mechanism by which transposon is specifically induced under the condition. Although acetylation of histone H3-K56 has been known to regulate the activity of the fission yeast transposon Tf2 epigenetically, our results indicated that H3-K56 acetylation has no specific contribution to the Tf2 activation in the face of chromosome configuration change. By contrast, clustering of the Tf2 loci within the nucleus was found to be collapsed upon chromosome configuration change. These data suggest the involvement of nuclear higher order structure in the chromosome evolution.

Report

(3 results)
  • 2015 Annual Research Report   Final Research Report ( PDF )
  • 2014 Research-status Report
  • Research Products

    (20 results)

All 2016 2015 2014 Other

All Journal Article (3 results) (of which Peer Reviewed: 3 results,  Open Access: 3 results,  Acknowledgement Compliant: 3 results) Presentation (15 results) (of which Int'l Joint Research: 3 results,  Invited: 7 results) Remarks (2 results)

  • [Journal Article] Acentric chromosome ends are prone to fusion with functional chromosome ends through a homology-directed rearrangement2016

    • Author(s)
      Ohno Y, Ogiyama Y, Kubota Y, Kubo T, Ishii K
    • Journal Title

      Nucleic Acids Research

      Volume: 44 Issue: 1 Pages: 232-244

    • DOI

      10.1093/nar/gkv997

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Shugoshin forms a specialized chromatin domain at subtelomeres that regulates transcription and replication timing.2016

    • Author(s)
      Tashiro S, Handa T, Matsuda A, Ban T, Takigawa T, Miyasato K, Ishii K, Kugou K, Ohta K, Hiraoka Y, Masukata H, Kanoh J.
    • Journal Title

      Nature Commun.

      Volume: 7 Issue: 1 Pages: 10393-10393

    • DOI

      10.1038/ncomms10393

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] The 19S proteasome subunit Rpt3 regulates distribution of CENP-A by associating with centromeric chromatin2014

    • Author(s)
      T. Kitagawa, K. Ishii, K. Takeda, T. Matsumoto
    • Journal Title

      Nature Communications

      Volume: 5 Issue: 1 Pages: 3597-3597

    • DOI

      10.1038/ncomms4597

    • Related Report
      2014 Research-status Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Presentation] 染色体の異数性が生み出す細胞変化2016

    • Author(s)
      石井浩二郎
    • Organizer
      新学術領域研究「がん研究分野の特性等を踏まえた支援活動」公開シンポジウム
    • Place of Presentation
      一橋講堂学術総合センター(東京都千代田区)
    • Year and Date
      2016-02-08
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 新生(ネオ)セントロメアの減数分裂2016

    • Author(s)
      荻山友貴、久保田佳乃、淺川東彦、平岡泰、石井浩二郎
    • Organizer
      第33回染色体ワークショップ
    • Place of Presentation
      松島一の坊(宮城県宮城郡松島町)
    • Year and Date
      2016-01-12
    • Related Report
      2015 Annual Research Report
  • [Presentation] セントロメアの異所的確立と世代を越えた維持2015

    • Author(s)
      石井浩二郎
    • Organizer
      第38回日本分子生物学会年会
    • Place of Presentation
      神戸ポートアイランド(兵庫県神戸市)
    • Year and Date
      2015-12-01
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 減数分裂におけるネオセントロメアの機能性とヘテロクロマチンの寄与2015

    • Author(s)
      荻山友貴、久保田佳乃、淺川東彦、平岡泰、石井浩二郎
    • Organizer
      第23回DNA複製・組換え修復ワークショップ研究会
    • Place of Presentation
      焼津グランドホテル(静岡県焼津市)
    • Year and Date
      2015-10-19
    • Related Report
      2015 Annual Research Report
  • [Presentation] Immediate cellular response to chromosomal aneuploidy2015

    • Author(s)
      Ishii K.
    • Organizer
      Gordon Research Conference: Chromosome Dynamics
    • Place of Presentation
      Waterville Valley (USA)
    • Year and Date
      2015-06-28
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Immediate cellular response to chromosomal aneuploidy2015

    • Author(s)
      Ohno Y, Kubota Y, Ishii K.
    • Organizer
      The eighth international fission yeast meeting
    • Place of Presentation
      生田神社会館(兵庫県神戸市)
    • Year and Date
      2015-06-21
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 体細胞分裂期にエピジェネティックに形成されたネオセントロメアの減数分裂期の機能性2015

    • Author(s)
      石井浩二郎
    • Organizer
      第9回日本エピジェネティクス研究会年会
    • Place of Presentation
      一橋講堂学術総合センター(東京都千代田区)
    • Year and Date
      2015-05-25
    • Related Report
      2015 Annual Research Report
  • [Presentation] Meiotic behaviors of neocentromeres2015

    • Author(s)
      Ogiyama Y, Asakawa H, Hiraoka Y, Ishii K.
    • Organizer
      EMBO Workshop: Dynamic kinetochore
    • Place of Presentation
      Copenhagen (Denmark)
    • Year and Date
      2015-05-18
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 分裂酵母ヒストンH2Aバリアントのセントロメアでの働き2015

    • Author(s)
      石井浩二郎
    • Organizer
      第2回ヒストンバリアント研究会
    • Place of Presentation
      神奈川県横浜市
    • Year and Date
      2015-02-28
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] 酵母LTR因子と染色体編成変化2015

    • Author(s)
      石井浩二郎
    • Organizer
      国立遺伝学研究所研究会「転移因子と宿主の相互作用による生命進化」
    • Place of Presentation
      静岡県三島市
    • Year and Date
      2015-02-26 – 2015-02-27
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] Immediate cellular response to chromosomal aneuploidy2014

    • Author(s)
      Kojiro Ishii
    • Organizer
      4D Nucleome 2014
    • Place of Presentation
      広島県廿日市市
    • Year and Date
      2014-12-17 – 2014-12-20
    • Related Report
      2014 Research-status Report
  • [Presentation] 染色体異数性に対する初期応答2014

    • Author(s)
      石井浩二郎
    • Organizer
      第32回染色体ワークショップ
    • Place of Presentation
      広島県廿日市市
    • Year and Date
      2014-12-15 – 2014-12-17
    • Related Report
      2014 Research-status Report
  • [Presentation] De novo generation of heterochromatic siRNAs in fission yeast2014

    • Author(s)
      Kojiro Ishii
    • Organizer
      The 16th Tokyo RNA Club
    • Place of Presentation
      東京都文京区
    • Year and Date
      2014-11-28
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] 宿主の染色体伝達欠損に伴うトランスポゾン制御変化2014

    • Author(s)
      石井浩二郎
    • Organizer
      第37回日本分子生物学会年会
    • Place of Presentation
      神奈川県横浜市
    • Year and Date
      2014-11-25 – 2014-11-27
    • Related Report
      2014 Research-status Report
    • Invited
  • [Presentation] 染色体異数性の初期応答2014

    • Author(s)
      石井浩二郎
    • Organizer
      日本遺伝学会第86回大会
    • Place of Presentation
      滋賀県長浜市
    • Year and Date
      2014-09-17 – 2014-09-19
    • Related Report
      2014 Research-status Report
  • [Remarks] 石井研ホームページ

    • URL

      http://www.fbs.osaka-u.ac.jp/labs/ishii/index.html

    • Related Report
      2015 Annual Research Report
  • [Remarks] 石井研究室ホームページ

    • URL

      http://www.fbs.osaka-u.ac.jp/labs/ishii/index.html

    • Related Report
      2014 Research-status Report

URL: 

Published: 2014-04-04   Modified: 2017-05-10  

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